EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000010798 (Gene tree)
Gene ID: 102959243
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 130853 bases
Position: chrKE721996.1:1134360-1265212
Accession: 102959243
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	1	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	2	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	3	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	4	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	5	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	6	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	7	8
ENSPTIP00000010144	PUF	PF00806.19	2.8e-72	8	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	1	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	2	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	3	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	4	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	5	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	6	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	7	8
ENSPTIP00000010139	PUF	PF00806.19	1.4e-71	8	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	1	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	2	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	3	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	4	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	5	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	6	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	7	8
ENSPTIP00000010128	PUF	PF00806.19	6.9e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014085	PUM1-202	3384	XM_015542199	ENSPTIP00000010139	1127 (aa)	XP_015397685	-
ENSPTIT00000014090	PUM1-203	2835	XM_015542200	ENSPTIP00000010144	944 (aa)	XP_015397686	-
ENSPTIT00000014074	PUM1-201	3675	XM_007092384	ENSPTIP00000010128	1224 (aa)	XP_007092446	-

Gene Model

Click here to download ENSPTIG00000010798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000010798's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000010798	PUM1	84	87.765	ENSPTIG00000018982	PUM2	100	76.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000010798	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSPTIG00000010798	PUM1	100	81.683	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSPTIG00000010798	PUM1	100	100.000	ENSAMEG00000017656	PUM1	100	99.347	Ailuropoda_melanoleuca
ENSPTIG00000010798	PUM1	100	81.683	ENSACIG00000021013	pum1	100	76.490	Amphilophus_citrinellus
ENSPTIG00000010798	PUM1	100	81.683	ENSAOCG00000003944	pum1	100	77.606	Amphiprion_ocellaris
ENSPTIG00000010798	PUM1	100	81.683	ENSAPEG00000014550	pum1	100	77.606	Amphiprion_percula
ENSPTIG00000010798	PUM1	100	81.683	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSPTIG00000010798	PUM1	100	97.761	ENSAPLG00000009351	PUM1	100	97.477	Anas_platyrhynchos
ENSPTIG00000010798	PUM1	100	96.264	ENSACAG00000000682	PUM1	98	95.707	Anolis_carolinensis
ENSPTIG00000010798	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSPTIG00000010798	PUM1	85	81.436	ENSACLG00000019354	pum1	100	78.908	Astatotilapia_calliptera
ENSPTIG00000010798	PUM1	100	84.367	ENSAMXG00000020607	pum1	96	79.097	Astyanax_mexicanus
ENSPTIG00000010798	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSPTIG00000010798	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSPTIG00000010798	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	97.309	Canis_familiaris
ENSPTIG00000010798	PUM1	89	99.377	ENSCAFG00020024616	PUM1	99	98.861	Canis_lupus_dingo
ENSPTIG00000010798	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.517	Capra_hircus
ENSPTIG00000010798	PUM1	100	99.306	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSPTIG00000010798	PUM1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSPTIG00000010798	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSPTIG00000010798	PUM1	100	99.306	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSPTIG00000010798	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.500	Chlorocebus_sabaeus
ENSPTIG00000010798	PUM1	92	100.000	ENSCHOG00000010245	PUM1	93	95.989	Choloepus_hoffmanni
ENSPTIG00000010798	PUM1	100	97.775	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSPTIG00000010798	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSPTIG00000010798	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSPTIG00000010798	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSPTIG00000010798	PUM1	85	80.917	ENSCSEG00000015981	pum1	100	77.613	Cynoglossus_semilaevis
ENSPTIG00000010798	PUM1	100	81.188	ENSCVAG00000007043	pum1	100	75.702	Cyprinodon_variegatus
ENSPTIG00000010798	PUM1	100	84.864	ENSDARG00000099256	pum1	100	79.599	Danio_rerio
ENSPTIG00000010798	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	98.991	Dasypus_novemcinctus
ENSPTIG00000010798	PUM1	82	98.792	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSPTIG00000010798	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.750	Echinops_telfairi
ENSPTIG00000010798	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	99.242	Equus_asinus_asinus
ENSPTIG00000010798	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	99.075	Equus_caballus
ENSPTIG00000010798	PUM1	80	100.000	ENSEEUG00000003871	PUM1	77	99.778	Erinaceus_europaeus
ENSPTIG00000010798	PUM1	100	83.843	ENSELUG00000002409	pum1	100	83.519	Esox_lucius
ENSPTIG00000010798	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSPTIG00000010798	PUM1	100	96.415	ENSFALG00000001214	PUM1	97	94.975	Ficedula_albicollis
ENSPTIG00000010798	PUM1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSPTIG00000010798	PUM1	70	88.593	ENSGMOG00000010491	pum1	100	74.835	Gadus_morhua
ENSPTIG00000010798	PUM1	100	98.010	ENSGALG00000042598	PUM1	99	98.988	Gallus_gallus
ENSPTIG00000010798	PUM1	100	81.312	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSPTIG00000010798	PUM1	100	81.404	ENSGACG00000005717	pum1	100	76.277	Gasterosteus_aculeatus
ENSPTIG00000010798	PUM1	100	97.512	ENSGAGG00000001290	PUM1	99	98.785	Gopherus_agassizii
ENSPTIG00000010798	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSPTIG00000010798	PUM1	100	81.436	ENSHBUG00000018718	pum1	100	76.281	Haplochromis_burtoni
ENSPTIG00000010798	PUM1	100	98.611	ENSHGLG00000013819	Pum1	100	98.738	Heterocephalus_glaber_female
ENSPTIG00000010798	PUM1	100	98.611	ENSHGLG00100008621	Pum1	100	98.738	Heterocephalus_glaber_male
ENSPTIG00000010798	PUM1	100	82.635	ENSIPUG00000020421	pum1	100	77.972	Ictalurus_punctatus
ENSPTIG00000010798	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSPTIG00000010798	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSPTIG00000010798	PUM1	100	80.817	ENSKMAG00000003481	pum1	100	75.868	Kryptolebias_marmoratus
ENSPTIG00000010798	PUM1	100	80.917	ENSLBEG00000002527	pum1	100	75.828	Labrus_bergylta
ENSPTIG00000010798	PUM1	100	88.600	ENSLACG00000017188	PUM1	99	86.595	Latimeria_chalumnae
ENSPTIG00000010798	PUM1	100	91.429	ENSLOCG00000005210	pum1	99	88.147	Lepisosteus_oculatus
ENSPTIG00000010798	PUM1	100	98.134	ENSLAFG00000003178	PUM1	100	98.738	Loxodonta_africana
ENSPTIG00000010798	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSPTIG00000010798	PUM1	100	100.000	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSPTIG00000010798	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSPTIG00000010798	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSPTIG00000010798	PUM1	100	81.436	ENSMAMG00000011606	pum1	100	76.364	Mastacembelus_armatus
ENSPTIG00000010798	PUM1	100	81.436	ENSMZEG00005005834	pum1	100	76.281	Maylandia_zebra
ENSPTIG00000010798	PUM1	100	97.637	ENSMGAG00000000724	PUM1	100	97.477	Meleagris_gallopavo
ENSPTIG00000010798	PUM1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSPTIG00000010798	PUM1	100	99.306	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSPTIG00000010798	PUM1	99	97.887	ENSMICG00000012213	-	100	96.755	Microcebus_murinus
ENSPTIG00000010798	PUM1	100	98.611	ENSMOCG00000015463	Pum1	100	98.738	Microtus_ochrogaster
ENSPTIG00000010798	PUM1	87	88.276	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSPTIG00000010798	PUM1	100	97.388	ENSMODG00000017067	PUM1	100	97.731	Monodelphis_domestica
ENSPTIG00000010798	PUM1	87	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSPTIG00000010798	PUM1	100	98.611	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSPTIG00000010798	PUM1	100	99.306	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSPTIG00000010798	PUM1	100	99.306	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSPTIG00000010798	PUM1	100	99.306	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSPTIG00000010798	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	99.327	Mustela_putorius_furo
ENSPTIG00000010798	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	99.159	Myotis_lucifugus
ENSPTIG00000010798	PUM1	100	99.153	ENSNGAG00000002378	Pum1	100	99.158	Nannospalax_galili
ENSPTIG00000010798	PUM1	100	78.556	ENSNBRG00000010689	pum1	100	83.436	Neolamprologus_brichardi
ENSPTIG00000010798	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSPTIG00000010798	PUM1	80	100.000	ENSMEUG00000000976	-	78	95.482	Notamacropus_eugenii
ENSPTIG00000010798	PUM1	81	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSPTIG00000010798	PUM1	100	98.623	ENSODEG00000003465	PUM1	100	98.906	Octodon_degus
ENSPTIG00000010798	PUM1	100	81.985	ENSONIG00000002290	pum1	100	76.612	Oreochromis_niloticus
ENSPTIG00000010798	PUM1	80	79.306	ENSOANG00000004902	-	100	77.426	Ornithorhynchus_anatinus
ENSPTIG00000010798	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.654	Oryctolagus_cuniculus
ENSPTIG00000010798	PUM1	100	82.054	ENSORLG00000011482	pum1	100	76.030	Oryzias_latipes
ENSPTIG00000010798	PUM1	100	82.178	ENSORLG00020019461	pum1	100	76.030	Oryzias_latipes_hni
ENSPTIG00000010798	PUM1	100	82.178	ENSORLG00015011375	pum1	100	76.112	Oryzias_latipes_hsok
ENSPTIG00000010798	PUM1	87	92.771	ENSOMEG00000009312	pum1	100	77.027	Oryzias_melastigma
ENSPTIG00000010798	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.390	Otolemur_garnettii
ENSPTIG00000010798	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.517	Ovis_aries
ENSPTIG00000010798	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSPTIG00000010798	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSPTIG00000010798	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSPTIG00000010798	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSPTIG00000010798	PUM1	100	82.497	ENSPKIG00000010578	pum1	100	78.135	Paramormyrops_kingsleyae
ENSPTIG00000010798	PUM1	100	98.005	ENSPSIG00000014118	PUM1	100	97.896	Pelodiscus_sinensis
ENSPTIG00000010798	PUM1	100	76.923	ENSPMGG00000005836	pum1	100	82.130	Periophthalmus_magnuspinnatus
ENSPTIG00000010798	PUM1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSPTIG00000010798	PUM1	100	97.637	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSPTIG00000010798	PUM1	93	83.867	ENSPFOG00000007289	pum1	99	82.569	Poecilia_formosa
ENSPTIG00000010798	PUM1	100	82.963	ENSPLAG00000007256	pum1	100	78.135	Poecilia_latipinna
ENSPTIG00000010798	PUM1	85	83.086	ENSPMEG00000019543	pum1	99	78.289	Poecilia_mexicana
ENSPTIG00000010798	PUM1	100	81.064	ENSPREG00000005195	pum1	100	80.947	Poecilia_reticulata
ENSPTIG00000010798	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.525	Pongo_abelii
ENSPTIG00000010798	PUM1	85	99.074	ENSPCAG00000001979	PUM1	76	99.691	Procavia_capensis
ENSPTIG00000010798	PUM1	100	99.306	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSPTIG00000010798	PUM1	100	100.000	ENSPVAG00000005207	PUM1	99	96.314	Pteropus_vampyrus
ENSPTIG00000010798	PUM1	100	81.436	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSPTIG00000010798	PUM1	100	84.615	ENSPNAG00000026728	pum1	100	80.480	Pygocentrus_nattereri
ENSPTIG00000010798	PUM1	100	99.306	ENSRNOG00000011709	Pum1	100	98.653	Rattus_norvegicus
ENSPTIG00000010798	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSPTIG00000010798	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSPTIG00000010798	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSPTIG00000010798	PUM1	100	97.388	ENSSHAG00000010918	PUM1	100	97.647	Sarcophilus_harrisii
ENSPTIG00000010798	PUM1	100	81.559	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSPTIG00000010798	PUM1	100	81.312	ENSSDUG00000009021	pum1	100	76.612	Seriola_dumerili
ENSPTIG00000010798	PUM1	100	81.312	ENSSLDG00000009667	pum1	100	78.653	Seriola_lalandi_dorsalis
ENSPTIG00000010798	PUM1	99	100.000	ENSSARG00000003055	PUM1	94	98.206	Sorex_araneus
ENSPTIG00000010798	PUM1	100	97.758	ENSSPUG00000006267	PUM1	100	97.138	Sphenodon_punctatus
ENSPTIG00000010798	PUM1	100	81.683	ENSSPAG00000016636	pum1	100	77.606	Stegastes_partitus
ENSPTIG00000010798	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSPTIG00000010798	PUM1	100	81.559	ENSTRUG00000013121	pum1	100	83.066	Takifugu_rubripes
ENSPTIG00000010798	PUM1	100	81.335	ENSTNIG00000016983	pum1	99	76.598	Tetraodon_nigroviridis
ENSPTIG00000010798	PUM1	84	100.000	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSPTIG00000010798	PUM1	92	99.453	ENSTTRG00000007436	PUM1	90	99.453	Tursiops_truncatus
ENSPTIG00000010798	PUM1	98	100.000	ENSUAMG00000018262	-	100	99.170	Ursus_americanus
ENSPTIG00000010798	PUM1	94	100.000	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSPTIG00000010798	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.664	Vicugna_pacos
ENSPTIG00000010798	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	100.000	Vulpes_vulpes
ENSPTIG00000010798	PUM1	100	88.447	ENSXETG00000012904	pum1	99	87.322	Xenopus_tropicalis
ENSPTIG00000010798	PUM1	100	81.312	ENSXMAG00000002945	pum1	100	77.927	Xiphophorus_maculatus