EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000011094 (Gene tree)
Gene ID: 102954635
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 147031 bases
Position: chrKE721700.1:3143223-3290253
Accession: 102954635
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010349	ResIII	PF04851.15	7.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014305	CHD6-201	8145	XM_007077730	ENSPTIP00000010349	2714 (aa)	XP_007077792	-
ENSPTIT00000014318	CHD6-202	1467	-	ENSPTIP00000010360	488 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000011094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000011094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000011094	CHD6	71	67.269	ENSPTIG00000011702	CHD7	70	65.177
ENSPTIG00000011094	CHD6	61	61.418	ENSPTIG00000021989	CHD8	67	63.103
ENSPTIG00000011094	CHD6	79	61.143	ENSPTIG00000021854	CHD9	72	62.375

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000011094	CHD6	100	91.878	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSPTIG00000011094	CHD6	74	75.215	ENSAPOG00000013736	chd6	71	69.046	Acanthochromis_polyacanthus
ENSPTIG00000011094	CHD6	100	95.215	ENSAMEG00000009496	CHD6	100	95.215	Ailuropoda_melanoleuca
ENSPTIG00000011094	CHD6	75	75.363	ENSATEG00000005608	chd6	67	71.220	Anabas_testudineus
ENSPTIG00000011094	CHD6	99	71.861	ENSAPLG00000015592	CHD6	100	72.684	Anas_platyrhynchos
ENSPTIG00000011094	CHD6	91	75.208	ENSACAG00000006842	CHD6	91	76.333	Anolis_carolinensis
ENSPTIG00000011094	CHD6	100	91.510	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSPTIG00000011094	CHD6	81	70.104	ENSAMXG00000009576	chd6	78	70.000	Astyanax_mexicanus
ENSPTIG00000011094	CHD6	100	89.526	ENSBTAG00000005733	CHD6	100	89.526	Bos_taurus
ENSPTIG00000011094	CHD6	100	91.327	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSPTIG00000011094	CHD6	100	95.436	ENSCAFG00000009236	CHD6	100	95.436	Canis_familiaris
ENSPTIG00000011094	CHD6	99	94.715	ENSCAFG00020012906	CHD6	99	98.847	Canis_lupus_dingo
ENSPTIG00000011094	CHD6	100	89.489	ENSCHIG00000017606	CHD6	100	89.489	Capra_hircus
ENSPTIG00000011094	CHD6	84	90.973	ENSTSYG00000014635	CHD6	100	90.973	Carlito_syrichta
ENSPTIG00000011094	CHD6	100	90.401	ENSCPOG00000015641	CHD6	100	90.401	Cavia_porcellus
ENSPTIG00000011094	CHD6	100	91.694	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSPTIG00000011094	CHD6	100	91.694	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSPTIG00000011094	CHD6	100	90.165	ENSCLAG00000013743	CHD6	100	90.165	Chinchilla_lanigera
ENSPTIG00000011094	CHD6	100	91.951	ENSCSAG00000013997	CHD6	100	91.951	Chlorocebus_sabaeus
ENSPTIG00000011094	CHD6	91	90.053	ENSCHOG00000012647	CHD6	95	90.053	Choloepus_hoffmanni
ENSPTIG00000011094	CHD6	99	73.246	ENSCPBG00000019382	CHD6	99	73.721	Chrysemys_picta_bellii
ENSPTIG00000011094	CHD6	100	91.804	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSPTIG00000011094	CHD6	100	88.893	ENSCGRG00001002694	Chd6	100	88.893	Cricetulus_griseus_chok1gshd
ENSPTIG00000011094	CHD6	82	73.767	ENSDARG00000017244	chd6	79	73.767	Danio_rerio
ENSPTIG00000011094	CHD6	99	89.598	ENSDNOG00000004176	CHD6	99	89.598	Dasypus_novemcinctus
ENSPTIG00000011094	CHD6	99	92.836	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSPTIG00000011094	CHD6	99	93.633	ENSECAG00000011761	CHD6	100	93.633	Equus_caballus
ENSPTIG00000011094	CHD6	70	79.954	ENSELUG00000012309	chd6	90	79.954	Esox_lucius
ENSPTIG00000011094	CHD6	100	99.411	ENSFCAG00000003572	CHD6	100	99.411	Felis_catus
ENSPTIG00000011094	CHD6	99	71.553	ENSFALG00000012563	CHD6	98	71.730	Ficedula_albicollis
ENSPTIG00000011094	CHD6	99	90.443	ENSFDAG00000013791	CHD6	99	90.443	Fukomys_damarensis
ENSPTIG00000011094	CHD6	74	69.264	ENSGMOG00000011715	chd6	86	69.407	Gadus_morhua
ENSPTIG00000011094	CHD6	78	70.904	ENSGACG00000000037	chd6	93	64.374	Gasterosteus_aculeatus
ENSPTIG00000011094	CHD6	100	91.915	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSPTIG00000011094	CHD6	77	72.153	ENSHBUG00000014701	chd6	68	71.875	Haplochromis_burtoni
ENSPTIG00000011094	CHD6	100	90.551	ENSHGLG00000004548	CHD6	100	90.588	Heterocephalus_glaber_female
ENSPTIG00000011094	CHD6	100	90.551	ENSHGLG00100006401	CHD6	100	90.588	Heterocephalus_glaber_male
ENSPTIG00000011094	CHD6	82	71.524	ENSIPUG00000003692	chd6	74	76.744	Ictalurus_punctatus
ENSPTIG00000011094	CHD6	100	91.431	ENSSTOG00000013382	CHD6	100	91.431	Ictidomys_tridecemlineatus
ENSPTIG00000011094	CHD6	87	76.237	ENSLACG00000010881	CHD6	86	76.295	Latimeria_chalumnae
ENSPTIG00000011094	CHD6	73	80.408	ENSLOCG00000007386	chd6	88	75.695	Lepisosteus_oculatus
ENSPTIG00000011094	CHD6	100	90.956	ENSLAFG00000012144	CHD6	100	90.956	Loxodonta_africana
ENSPTIG00000011094	CHD6	100	92.025	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSPTIG00000011094	CHD6	100	92.025	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSPTIG00000011094	CHD6	100	92.025	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSPTIG00000011094	CHD6	100	91.700	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSPTIG00000011094	CHD6	74	73.735	ENSMAMG00000013111	chd6	65	73.768	Mastacembelus_armatus
ENSPTIG00000011094	CHD6	99	71.246	ENSMGAG00000001121	CHD6	100	71.904	Meleagris_gallopavo
ENSPTIG00000011094	CHD6	100	91.389	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSPTIG00000011094	CHD6	89	80.669	ENSMODG00000000720	-	99	80.669	Monodelphis_domestica
ENSPTIG00000011094	CHD6	100	87.091	MGP_CAROLIEiJ_G0024604	Chd6	100	94.515	Mus_caroli
ENSPTIG00000011094	CHD6	100	87.348	ENSMUSG00000057133	Chd6	100	94.430	Mus_musculus
ENSPTIG00000011094	CHD6	100	87.164	MGP_PahariEiJ_G0026048	Chd6	100	94.852	Mus_pahari
ENSPTIG00000011094	CHD6	100	87.312	MGP_SPRETEiJ_G0025526	Chd6	100	94.515	Mus_spretus
ENSPTIG00000011094	CHD6	100	93.869	ENSMPUG00000017695	CHD6	100	93.906	Mustela_putorius_furo
ENSPTIG00000011094	CHD6	100	92.019	ENSMLUG00000016247	CHD6	100	92.019	Myotis_lucifugus
ENSPTIG00000011094	CHD6	78	73.238	ENSNBRG00000013839	chd6	79	73.320	Neolamprologus_brichardi
ENSPTIG00000011094	CHD6	100	90.011	ENSNLEG00000006496	CHD6	100	89.938	Nomascus_leucogenys
ENSPTIG00000011094	CHD6	100	87.091	ENSOPRG00000013376	-	100	87.091	Ochotona_princeps
ENSPTIG00000011094	CHD6	84	74.665	ENSONIG00000000393	chd6	87	74.665	Oreochromis_niloticus
ENSPTIG00000011094	CHD6	100	70.282	ENSOANG00000014347	CHD6	99	70.431	Ornithorhynchus_anatinus
ENSPTIG00000011094	CHD6	99	89.400	ENSOCUG00000012394	CHD6	100	89.400	Oryctolagus_cuniculus
ENSPTIG00000011094	CHD6	79	70.012	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSPTIG00000011094	CHD6	99	90.196	ENSOGAG00000002427	CHD6	99	90.133	Otolemur_garnettii
ENSPTIG00000011094	CHD6	99	87.091	ENSOARG00000002597	CHD6	100	87.091	Ovis_aries
ENSPTIG00000011094	CHD6	100	99.742	ENSPPRG00000014756	CHD6	100	99.742	Panthera_pardus
ENSPTIG00000011094	CHD6	100	91.988	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSPTIG00000011094	CHD6	100	92.025	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSPTIG00000011094	CHD6	77	76.667	ENSPKIG00000005578	chd6	79	72.716	Paramormyrops_kingsleyae
ENSPTIG00000011094	CHD6	74	76.349	ENSPMGG00000014877	chd6	84	75.172	Periophthalmus_magnuspinnatus
ENSPTIG00000011094	CHD6	100	80.044	ENSPCIG00000028037	CHD6	100	80.425	Phascolarctos_cinereus
ENSPTIG00000011094	CHD6	76	70.116	ENSPLAG00000003128	chd6	66	73.438	Poecilia_latipinna
ENSPTIG00000011094	CHD6	70	72.803	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSPTIG00000011094	CHD6	100	91.991	ENSPPYG00000011016	CHD6	100	91.991	Pongo_abelii
ENSPTIG00000011094	CHD6	99	91.532	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSPTIG00000011094	CHD6	78	74.886	ENSPNYG00000022516	chd6	78	74.660	Pundamilia_nyererei
ENSPTIG00000011094	CHD6	81	70.780	ENSPNAG00000012825	chd6	79	71.239	Pygocentrus_nattereri
ENSPTIG00000011094	CHD6	100	86.539	ENSRNOG00000016744	Chd6	100	86.502	Rattus_norvegicus
ENSPTIG00000011094	CHD6	100	91.657	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSPTIG00000011094	CHD6	99	79.611	ENSSHAG00000017072	CHD6	99	80.015	Sarcophilus_harrisii
ENSPTIG00000011094	CHD6	78	75.862	ENSSFOG00015012920	chd6	81	72.556	Scleropages_formosus
ENSPTIG00000011094	CHD6	59	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSPTIG00000011094	CHD6	100	92.056	ENSSSCG00000007360	CHD6	100	92.746	Sus_scrofa
ENSPTIG00000011094	CHD6	97	73.790	ENSTGUG00000003179	CHD6	99	73.862	Taeniopygia_guttata
ENSPTIG00000011094	CHD6	51	77.231	ENSTNIG00000017487	chd6	57	77.231	Tetraodon_nigroviridis
ENSPTIG00000011094	CHD6	100	89.085	ENSTTRG00000013438	CHD6	100	89.085	Tursiops_truncatus
ENSPTIG00000011094	CHD6	100	93.083	ENSUAMG00000024036	CHD6	99	94.055	Ursus_americanus
ENSPTIG00000011094	CHD6	99	95.453	ENSUMAG00000002017	CHD6	99	95.456	Ursus_maritimus
ENSPTIG00000011094	CHD6	94	90.486	ENSVPAG00000007941	CHD6	95	90.486	Vicugna_pacos
ENSPTIG00000011094	CHD6	100	95.473	ENSVVUG00000029164	CHD6	100	95.473	Vulpes_vulpes
ENSPTIG00000011094	CHD6	99	60.912	ENSXETG00000021445	chd6	99	60.662	Xenopus_tropicalis