EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000011184 (Gene tree)
Gene ID: 102952738
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 46862 bases
Position: chrKE721849.1:230857-277718
Accession: 102952738
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010432	PRP1_N	PF06424.12	2.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014391	PRPF6-201	2826	XM_007087068	ENSPTIP00000010432	941 (aa)	XP_007087130	-

Gene Model

Click here to download ENSPTIG00000011184's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000011184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000011184	PRPF6	97	97.383	ENSG00000101161	PRPF6	97	97.383	Homo_sapiens
ENSPTIG00000011184	PRPF6	97	92.585	ENSAPOG00000010395	prpf6	93	93.021	Acanthochromis_polyacanthus
ENSPTIG00000011184	PRPF6	97	99.564	ENSAMEG00000001916	PRPF6	97	99.564	Ailuropoda_melanoleuca
ENSPTIG00000011184	PRPF6	97	92.585	ENSACIG00000019862	prpf6	93	93.021	Amphilophus_citrinellus
ENSPTIG00000011184	PRPF6	97	92.585	ENSAOCG00000012988	prpf6	93	93.021	Amphiprion_ocellaris
ENSPTIG00000011184	PRPF6	97	85.823	ENSAPEG00000008301	prpf6	97	86.260	Amphiprion_percula
ENSPTIG00000011184	PRPF6	97	92.257	ENSATEG00000005581	prpf6	93	92.694	Anabas_testudineus
ENSPTIG00000011184	PRPF6	97	97.928	ENSACAG00000006464	PRPF6	93	97.928	Anolis_carolinensis
ENSPTIG00000011184	PRPF6	97	97.492	ENSANAG00000012661	PRPF6	97	98.182	Aotus_nancymaae
ENSPTIG00000011184	PRPF6	97	92.257	ENSACLG00000025875	prpf6	93	92.694	Astatotilapia_calliptera
ENSPTIG00000011184	PRPF6	97	92.694	ENSAMXG00000001929	prpf6	93	93.130	Astyanax_mexicanus
ENSPTIG00000011184	PRPF6	97	99.455	ENSBTAG00000011656	PRPF6	97	99.455	Bos_taurus
ENSPTIG00000011184	PRPF6	97	97.492	ENSCJAG00000010616	PRPF6	97	97.492	Callithrix_jacchus
ENSPTIG00000011184	PRPF6	97	99.455	ENSCAFG00000013165	PRPF6	97	99.455	Canis_familiaris
ENSPTIG00000011184	PRPF6	97	99.455	ENSCAFG00020002050	PRPF6	97	99.455	Canis_lupus_dingo
ENSPTIG00000011184	PRPF6	97	99.455	ENSCHIG00000018187	PRPF6	97	99.455	Capra_hircus
ENSPTIG00000011184	PRPF6	97	98.255	ENSTSYG00000007814	PRPF6	97	98.255	Carlito_syrichta
ENSPTIG00000011184	PRPF6	97	97.165	ENSCAPG00000015077	PRPF6	100	97.165	Cavia_aperea
ENSPTIG00000011184	PRPF6	97	98.473	ENSCPOG00000007518	PRPF6	97	98.473	Cavia_porcellus
ENSPTIG00000011184	PRPF6	97	94.111	ENSCCAG00000024564	PRPF6	97	94.220	Cebus_capucinus
ENSPTIG00000011184	PRPF6	97	97.492	ENSCATG00000037473	PRPF6	97	97.492	Cercocebus_atys
ENSPTIG00000011184	PRPF6	97	94.438	ENSCLAG00000003854	PRPF6	97	94.438	Chinchilla_lanigera
ENSPTIG00000011184	PRPF6	97	92.091	ENSCSAG00000016742	PRPF6	97	92.091	Chlorocebus_sabaeus
ENSPTIG00000011184	PRPF6	85	81.138	ENSCHOG00000003315	-	100	81.138	Choloepus_hoffmanni
ENSPTIG00000011184	PRPF6	97	98.037	ENSCPBG00000013964	PRPF6	94	98.037	Chrysemys_picta_bellii
ENSPTIG00000011184	PRPF6	97	73.593	ENSCING00000008817	-	97	73.593	Ciona_intestinalis
ENSPTIG00000011184	PRPF6	97	97.274	ENSCANG00000038230	PRPF6	97	97.274	Colobus_angolensis_palliatus
ENSPTIG00000011184	PRPF6	97	98.582	ENSCGRG00001022666	Prpf6	97	98.582	Cricetulus_griseus_chok1gshd
ENSPTIG00000011184	PRPF6	97	86.696	ENSCSEG00000018561	prpf6	97	87.132	Cynoglossus_semilaevis
ENSPTIG00000011184	PRPF6	97	92.585	ENSCVAG00000010550	prpf6	93	93.021	Cyprinodon_variegatus
ENSPTIG00000011184	PRPF6	97	92.475	ENSDARG00000091367	prpf6	96	92.912	Danio_rerio
ENSPTIG00000011184	PRPF6	97	98.146	ENSDNOG00000040544	PRPF6	97	98.146	Dasypus_novemcinctus
ENSPTIG00000011184	PRPF6	91	97.664	ENSDORG00000005406	Prpf6	100	97.664	Dipodomys_ordii
ENSPTIG00000011184	PRPF6	96	72.075	FBgn0036828	CG6841	96	72.387	Drosophila_melanogaster
ENSPTIG00000011184	PRPF6	82	98.810	ENSETEG00000004447	PRPF6	81	98.718	Echinops_telfairi
ENSPTIG00000011184	PRPF6	97	87.065	ENSEBUG00000008835	prpf6	97	87.065	Eptatretus_burgeri
ENSPTIG00000011184	PRPF6	97	99.128	ENSEASG00005023115	PRPF6	97	99.128	Equus_asinus_asinus
ENSPTIG00000011184	PRPF6	97	94.766	ENSECAG00000013983	PRPF6	97	94.766	Equus_caballus
ENSPTIG00000011184	PRPF6	87	96.305	ENSEEUG00000000180	PRPF6	79	96.305	Erinaceus_europaeus
ENSPTIG00000011184	PRPF6	97	91.276	ENSELUG00000001945	prpf6	91	91.276	Esox_lucius
ENSPTIG00000011184	PRPF6	97	99.891	ENSFCAG00000001183	PRPF6	97	99.891	Felis_catus
ENSPTIG00000011184	PRPF6	97	90.731	ENSFALG00000006046	-	94	90.731	Ficedula_albicollis
ENSPTIG00000011184	PRPF6	97	98.037	ENSFALG00000010326	-	95	98.037	Ficedula_albicollis
ENSPTIG00000011184	PRPF6	97	98.473	ENSFDAG00000006451	PRPF6	100	98.413	Fukomys_damarensis
ENSPTIG00000011184	PRPF6	97	93.239	ENSFHEG00000000560	prpf6	94	93.239	Fundulus_heteroclitus
ENSPTIG00000011184	PRPF6	97	89.046	ENSGMOG00000015622	prpf6	97	89.046	Gadus_morhua
ENSPTIG00000011184	PRPF6	97	97.819	ENSGALG00000006001	PRPF6	97	97.819	Gallus_gallus
ENSPTIG00000011184	PRPF6	97	87.786	ENSGAFG00000021109	prpf6	93	88.222	Gambusia_affinis
ENSPTIG00000011184	PRPF6	97	91.058	ENSGACG00000002576	prpf6	97	91.058	Gasterosteus_aculeatus
ENSPTIG00000011184	PRPF6	97	97.928	ENSGAGG00000008653	PRPF6	94	97.928	Gopherus_agassizii
ENSPTIG00000011184	PRPF6	97	97.383	ENSGGOG00000016876	PRPF6	96	99.646	Gorilla_gorilla
ENSPTIG00000011184	PRPF6	97	92.257	ENSHBUG00000004496	prpf6	93	92.694	Haplochromis_burtoni
ENSPTIG00000011184	PRPF6	97	98.473	ENSHGLG00000009222	PRPF6	97	98.473	Heterocephalus_glaber_female
ENSPTIG00000011184	PRPF6	97	98.473	ENSHGLG00100016600	PRPF6	100	98.473	Heterocephalus_glaber_male
ENSPTIG00000011184	PRPF6	97	91.058	ENSHCOG00000011513	prpf6	93	91.494	Hippocampus_comes
ENSPTIG00000011184	PRPF6	97	93.348	ENSIPUG00000004912	prpf6	94	93.348	Ictalurus_punctatus
ENSPTIG00000011184	PRPF6	97	95.643	ENSSTOG00000002922	PRPF6	97	95.643	Ictidomys_tridecemlineatus
ENSPTIG00000011184	PRPF6	97	98.582	ENSJJAG00000000836	Prpf6	97	98.582	Jaculus_jaculus
ENSPTIG00000011184	PRPF6	97	92.366	ENSKMAG00000017800	prpf6	93	92.803	Kryptolebias_marmoratus
ENSPTIG00000011184	PRPF6	97	91.821	ENSLBEG00000012582	prpf6	93	91.821	Labrus_bergylta
ENSPTIG00000011184	PRPF6	97	94.656	ENSLOCG00000004827	prpf6	92	95.093	Lepisosteus_oculatus
ENSPTIG00000011184	PRPF6	97	97.601	ENSLAFG00000005272	PRPF6	97	97.601	Loxodonta_africana
ENSPTIG00000011184	PRPF6	97	97.274	ENSMFAG00000037542	PRPF6	96	99.646	Macaca_fascicularis
ENSPTIG00000011184	PRPF6	91	99.307	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSPTIG00000011184	PRPF6	97	82.609	ENSMNEG00000045555	PRPF6	97	82.609	Macaca_nemestrina
ENSPTIG00000011184	PRPF6	97	92.366	ENSMAMG00000010718	prpf6	94	92.694	Mastacembelus_armatus
ENSPTIG00000011184	PRPF6	97	91.939	ENSMZEG00005015261	-	97	92.375	Maylandia_zebra
ENSPTIG00000011184	PRPF6	92	92.494	ENSMZEG00005026539	prpf6	98	92.494	Maylandia_zebra
ENSPTIG00000011184	PRPF6	97	98.037	ENSMGAG00000006634	PRPF6	100	98.037	Meleagris_gallopavo
ENSPTIG00000011184	PRPF6	97	98.473	ENSMAUG00000013969	Prpf6	97	98.473	Mesocricetus_auratus
ENSPTIG00000011184	PRPF6	87	98.054	ENSMICG00000017793	PRPF6	99	98.054	Microcebus_murinus
ENSPTIG00000011184	PRPF6	97	98.473	ENSMOCG00000001701	Prpf6	97	98.473	Microtus_ochrogaster
ENSPTIG00000011184	PRPF6	97	91.712	ENSMMOG00000020419	prpf6	97	92.148	Mola_mola
ENSPTIG00000011184	PRPF6	97	98.983	ENSMODG00000017051	PRPF6	96	98.983	Monodelphis_domestica
ENSPTIG00000011184	PRPF6	97	92.475	ENSMALG00000000089	prpf6	98	92.475	Monopterus_albus
ENSPTIG00000011184	PRPF6	97	91.712	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSPTIG00000011184	PRPF6	97	98.473	ENSMUSG00000002455	Prpf6	100	98.148	Mus_musculus
ENSPTIG00000011184	PRPF6	97	98.473	MGP_PahariEiJ_G0026262	Prpf6	100	98.148	Mus_pahari
ENSPTIG00000011184	PRPF6	97	98.473	MGP_SPRETEiJ_G0025741	Prpf6	100	98.148	Mus_spretus
ENSPTIG00000011184	PRPF6	91	98.927	ENSMPUG00000008673	PRPF6	99	98.927	Mustela_putorius_furo
ENSPTIG00000011184	PRPF6	97	98.582	ENSNGAG00000003365	Prpf6	97	98.582	Nannospalax_galili
ENSPTIG00000011184	PRPF6	97	92.366	ENSNBRG00000015025	prpf6	93	92.803	Neolamprologus_brichardi
ENSPTIG00000011184	PRPF6	97	97.274	ENSNLEG00000010208	PRPF6	97	97.274	Nomascus_leucogenys
ENSPTIG00000011184	PRPF6	97	88.735	ENSMEUG00000009824	-	87	88.735	Notamacropus_eugenii
ENSPTIG00000011184	PRPF6	97	92.366	ENSODEG00000004841	PRPF6	97	92.366	Octodon_degus
ENSPTIG00000011184	PRPF6	97	92.257	ENSONIG00000017406	prpf6	93	92.694	Oreochromis_niloticus
ENSPTIG00000011184	PRPF6	97	98.364	ENSOANG00000004920	PRPF6	97	98.364	Ornithorhynchus_anatinus
ENSPTIG00000011184	PRPF6	97	97.383	ENSOCUG00000014151	PRPF6	98	97.383	Oryctolagus_cuniculus
ENSPTIG00000011184	PRPF6	97	92.039	ENSORLG00000009592	prpf6	93	92.039	Oryzias_latipes
ENSPTIG00000011184	PRPF6	97	92.148	ENSORLG00020001458	prpf6	93	92.148	Oryzias_latipes_hni
ENSPTIG00000011184	PRPF6	97	92.148	ENSORLG00015018762	prpf6	93	92.148	Oryzias_latipes_hsok
ENSPTIG00000011184	PRPF6	97	91.821	ENSOMEG00000012174	prpf6	93	92.257	Oryzias_melastigma
ENSPTIG00000011184	PRPF6	97	90.632	ENSOGAG00000007573	PRPF6	97	90.632	Otolemur_garnettii
ENSPTIG00000011184	PRPF6	97	99.455	ENSOARG00000008776	PRPF6	97	99.455	Ovis_aries
ENSPTIG00000011184	PRPF6	97	97.383	ENSPPAG00000008686	PRPF6	96	99.646	Pan_paniscus
ENSPTIG00000011184	PRPF6	97	100.000	ENSPPRG00000008497	PRPF6	97	100.000	Panthera_pardus
ENSPTIG00000011184	PRPF6	97	97.383	ENSPTRG00000013765	PRPF6	96	99.646	Pan_troglodytes
ENSPTIG00000011184	PRPF6	97	96.947	ENSPANG00000024135	PRPF6	97	96.947	Papio_anubis
ENSPTIG00000011184	PRPF6	97	93.784	ENSPKIG00000005627	prpf6	96	94.220	Paramormyrops_kingsleyae
ENSPTIG00000011184	PRPF6	94	98.186	ENSPSIG00000007717	PRPF6	100	98.186	Pelodiscus_sinensis
ENSPTIG00000011184	PRPF6	97	90.087	ENSPMGG00000008925	prpf6	94	90.305	Periophthalmus_magnuspinnatus
ENSPTIG00000011184	PRPF6	97	98.364	ENSPEMG00000016036	Prpf6	97	98.364	Peromyscus_maniculatus_bairdii
ENSPTIG00000011184	PRPF6	97	88.575	ENSPMAG00000006144	prpf6	97	88.575	Petromyzon_marinus
ENSPTIG00000011184	PRPF6	97	98.473	ENSPCIG00000017909	PRPF6	97	98.473	Phascolarctos_cinereus
ENSPTIG00000011184	PRPF6	97	92.803	ENSPFOG00000006431	prpf6	93	93.239	Poecilia_formosa
ENSPTIG00000011184	PRPF6	97	92.694	ENSPLAG00000005974	prpf6	93	93.130	Poecilia_latipinna
ENSPTIG00000011184	PRPF6	97	92.912	ENSPMEG00000009977	prpf6	93	93.348	Poecilia_mexicana
ENSPTIG00000011184	PRPF6	97	92.803	ENSPREG00000017993	prpf6	89	93.239	Poecilia_reticulata
ENSPTIG00000011184	PRPF6	97	96.838	ENSPPYG00000011256	PRPF6	97	96.838	Pongo_abelii
ENSPTIG00000011184	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSPTIG00000011184	PRPF6	97	97.928	ENSPCOG00000016881	PRPF6	97	97.928	Propithecus_coquereli
ENSPTIG00000011184	PRPF6	97	92.803	ENSPVAG00000014316	PRPF6	97	92.803	Pteropus_vampyrus
ENSPTIG00000011184	PRPF6	97	75.490	ENSPNYG00000001939	prpf6	70	89.727	Pundamilia_nyererei
ENSPTIG00000011184	PRPF6	97	93.021	ENSPNAG00000015606	prpf6	93	93.457	Pygocentrus_nattereri
ENSPTIG00000011184	PRPF6	97	98.364	ENSRNOG00000051498	Prpf6	97	98.364	Rattus_norvegicus
ENSPTIG00000011184	PRPF6	97	97.274	ENSRBIG00000043613	PRPF6	98	97.924	Rhinopithecus_bieti
ENSPTIG00000011184	PRPF6	97	94.028	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSPTIG00000011184	PRPF6	91	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSPTIG00000011184	PRPF6	97	98.473	ENSSHAG00000016810	PRPF6	97	98.473	Sarcophilus_harrisii
ENSPTIG00000011184	PRPF6	97	94.329	ENSSFOG00015020859	prpf6	98	94.766	Scleropages_formosus
ENSPTIG00000011184	PRPF6	97	91.603	ENSSMAG00000008112	prpf6	93	91.603	Scophthalmus_maximus
ENSPTIG00000011184	PRPF6	97	92.257	ENSSDUG00000016142	prpf6	93	92.694	Seriola_dumerili
ENSPTIG00000011184	PRPF6	97	92.257	ENSSLDG00000025283	prpf6	97	89.095	Seriola_lalandi_dorsalis
ENSPTIG00000011184	PRPF6	94	96.485	ENSSPUG00000018260	PRPF6	100	96.485	Sphenodon_punctatus
ENSPTIG00000011184	PRPF6	97	92.257	ENSSPAG00000015850	prpf6	93	92.694	Stegastes_partitus
ENSPTIG00000011184	PRPF6	97	98.691	ENSSSCG00000029119	PRPF6	100	98.639	Sus_scrofa
ENSPTIG00000011184	PRPF6	97	98.146	ENSTGUG00000007221	PRPF6	97	98.146	Taeniopygia_guttata
ENSPTIG00000011184	PRPF6	97	91.712	ENSTRUG00000002920	prpf6	93	92.148	Takifugu_rubripes
ENSPTIG00000011184	PRPF6	97	85.249	ENSTNIG00000017873	prpf6	97	85.683	Tetraodon_nigroviridis
ENSPTIG00000011184	PRPF6	89	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSPTIG00000011184	PRPF6	97	98.800	ENSTTRG00000013068	PRPF6	97	98.800	Tursiops_truncatus
ENSPTIG00000011184	PRPF6	97	98.037	ENSUMAG00000021631	PRPF6	98	98.037	Ursus_maritimus
ENSPTIG00000011184	PRPF6	97	99.455	ENSVVUG00000014948	PRPF6	97	99.455	Vulpes_vulpes
ENSPTIG00000011184	PRPF6	97	95.311	ENSXETG00000012054	prpf6	94	95.747	Xenopus_tropicalis
ENSPTIG00000011184	PRPF6	97	92.912	ENSXCOG00000008082	prpf6	93	93.348	Xiphophorus_couchianus
ENSPTIG00000011184	PRPF6	97	92.912	ENSXMAG00000015581	prpf6	93	93.348	Xiphophorus_maculatus