EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000011225 (Gene tree)
Gene ID: 102969605
Gene Symbol: LARP1B
Alias: -
Full Name: La ribonucleoprotein domain family member 1B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 43754 bases
Position: chrKE721976.1:17859274-17903027
Accession: 102969605
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010487	La	PF05383.17	3.1e-22	1	1
ENSPTIP00000010479	La	PF05383.17	7e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014439	LARP1B-201	1560	XM_015541901	ENSPTIP00000010479	520 (aa)	XP_015397387	-
ENSPTIT00000014448	LARP1B-202	2182	XM_015541902	ENSPTIP00000010487	335 (aa)	XP_015397388	UPI0007661F84

Gene Model

Click here to download ENSPTIG00000011225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000011225's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000011225	LARP1B	98	53.591	ENSPTIG00000007013	LARP1	53	53.591

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000011225	LARP1B	100	91.642	ENSG00000138709	LARP1B	100	92.000	Homo_sapiens
ENSPTIG00000011225	LARP1B	99	49.731	ENSAPOG00000020101	larp1b	51	48.858	Acanthochromis_polyacanthus
ENSPTIG00000011225	LARP1B	100	96.119	ENSAMEG00000002748	LARP1B	100	96.119	Ailuropoda_melanoleuca
ENSPTIG00000011225	LARP1B	99	49.408	ENSAOCG00000014268	larp1b	52	51.556	Amphiprion_ocellaris
ENSPTIG00000011225	LARP1B	99	51.277	ENSAPEG00000004126	larp1b	50	50.893	Amphiprion_percula
ENSPTIG00000011225	LARP1B	99	49.455	ENSATEG00000017849	larp1b	51	49.821	Anabas_testudineus
ENSPTIG00000011225	LARP1B	98	64.126	ENSAPLG00000010129	LARP1B	58	64.246	Anas_platyrhynchos
ENSPTIG00000011225	LARP1B	98	75.922	ENSACAG00000011338	LARP1B	53	75.922	Anolis_carolinensis
ENSPTIG00000011225	LARP1B	98	80.350	ENSANAG00000034618	LARP1B	96	79.456	Aotus_nancymaae
ENSPTIG00000011225	LARP1B	100	90.595	ENSBTAG00000012135	LARP1B	99	90.595	Bos_taurus
ENSPTIG00000011225	LARP1B	100	92.239	ENSCJAG00000003338	LARP1B	100	92.239	Callithrix_jacchus
ENSPTIG00000011225	LARP1B	98	96.657	ENSCAFG00000003831	LARP1B	56	95.312	Canis_familiaris
ENSPTIG00000011225	LARP1B	100	96.716	ENSCAFG00020018899	LARP1B	100	96.716	Canis_lupus_dingo
ENSPTIG00000011225	LARP1B	100	91.667	ENSCHIG00000023144	LARP1B	100	91.667	Capra_hircus
ENSPTIG00000011225	LARP1B	98	86.322	ENSTSYG00000002037	-	93	86.322	Carlito_syrichta
ENSPTIG00000011225	LARP1B	76	96.429	ENSCPOG00000034668	-	93	96.429	Cavia_porcellus
ENSPTIG00000011225	LARP1B	99	92.216	ENSCCAG00000021948	LARP1B	99	92.216	Cebus_capucinus
ENSPTIG00000011225	LARP1B	100	88.955	ENSCATG00000013541	LARP1B	100	88.955	Cercocebus_atys
ENSPTIG00000011225	LARP1B	100	87.463	ENSCLAG00000006448	-	100	87.463	Chinchilla_lanigera
ENSPTIG00000011225	LARP1B	98	91.541	ENSCSAG00000003582	LARP1B	56	89.300	Chlorocebus_sabaeus
ENSPTIG00000011225	LARP1B	98	79.492	ENSCHOG00000005354	LARP1B	58	80.507	Choloepus_hoffmanni
ENSPTIG00000011225	LARP1B	99	81.310	ENSCANG00000026958	LARP1B	100	81.310	Colobus_angolensis_palliatus
ENSPTIG00000011225	LARP1B	100	91.045	ENSCGRG00001004660	-	100	91.045	Cricetulus_griseus_chok1gshd
ENSPTIG00000011225	LARP1B	100	90.746	ENSCGRG00000001914	-	100	90.746	Cricetulus_griseus_crigri
ENSPTIG00000011225	LARP1B	97	45.273	ENSCSEG00000013519	larp1b	50	49.091	Cynoglossus_semilaevis
ENSPTIG00000011225	LARP1B	99	50.276	ENSCVAG00000005046	larp1b	50	50.441	Cyprinodon_variegatus
ENSPTIG00000011225	LARP1B	98	90.881	ENSDNOG00000018765	-	100	89.628	Dasypus_novemcinctus
ENSPTIG00000011225	LARP1B	98	43.130	ENSEBUG00000003668	larp1b	55	43.576	Eptatretus_burgeri
ENSPTIG00000011225	LARP1B	99	95.509	ENSEASG00005018106	LARP1B	99	95.509	Equus_asinus_asinus
ENSPTIG00000011225	LARP1B	63	57.471	ENSELUG00000023774	larp1b	64	47.048	Esox_lucius
ENSPTIG00000011225	LARP1B	100	99.701	ENSFCAG00000014650	-	100	99.701	Felis_catus
ENSPTIG00000011225	LARP1B	97	68.701	ENSFALG00000008098	LARP1B	55	68.701	Ficedula_albicollis
ENSPTIG00000011225	LARP1B	98	68.482	ENSGALG00000010207	LARP1B	50	68.677	Gallus_gallus
ENSPTIG00000011225	LARP1B	86	55.414	ENSGAFG00000012012	larp1b	53	55.414	Gambusia_affinis
ENSPTIG00000011225	LARP1B	100	91.642	ENSGGOG00000015900	LARP1B	100	91.642	Gorilla_gorilla
ENSPTIG00000011225	LARP1B	98	74.468	ENSHGLG00000013922	-	97	74.545	Heterocephalus_glaber_female
ENSPTIG00000011225	LARP1B	100	85.546	ENSHGLG00000006728	-	99	85.841	Heterocephalus_glaber_female
ENSPTIG00000011225	LARP1B	100	86.269	ENSHGLG00100014041	-	96	86.269	Heterocephalus_glaber_male
ENSPTIG00000011225	LARP1B	98	74.468	ENSHGLG00100016491	-	97	74.545	Heterocephalus_glaber_male
ENSPTIG00000011225	LARP1B	100	89.583	ENSSTOG00000008596	-	100	89.583	Ictidomys_tridecemlineatus
ENSPTIG00000011225	LARP1B	96	73.520	ENSSTOG00000034510	-	87	73.520	Ictidomys_tridecemlineatus
ENSPTIG00000011225	LARP1B	91	66.667	ENSSTOG00000033183	-	100	66.667	Ictidomys_tridecemlineatus
ENSPTIG00000011225	LARP1B	99	81.873	ENSSTOG00000021917	-	94	82.175	Ictidomys_tridecemlineatus
ENSPTIG00000011225	LARP1B	99	86.826	ENSJJAG00000022360	Larp1b	99	86.826	Jaculus_jaculus
ENSPTIG00000011225	LARP1B	97	47.761	ENSKMAG00000011589	larp1b	50	50.279	Kryptolebias_marmoratus
ENSPTIG00000011225	LARP1B	98	71.456	ENSLACG00000015247	LARP1B	100	70.229	Latimeria_chalumnae
ENSPTIG00000011225	LARP1B	98	57.554	ENSLOCG00000010684	larp1b	54	60.436	Lepisosteus_oculatus
ENSPTIG00000011225	LARP1B	99	92.857	ENSLAFG00000008473	-	99	92.857	Loxodonta_africana
ENSPTIG00000011225	LARP1B	100	92.537	ENSMFAG00000002218	LARP1B	100	92.537	Macaca_fascicularis
ENSPTIG00000011225	LARP1B	69	90.345	ENSMFAG00000003306	-	93	90.345	Macaca_fascicularis
ENSPTIG00000011225	LARP1B	100	92.537	ENSMMUG00000021347	LARP1B	100	92.537	Macaca_mulatta
ENSPTIG00000011225	LARP1B	65	90.909	ENSMNEG00000027747	-	89	90.909	Macaca_nemestrina
ENSPTIG00000011225	LARP1B	83	85.833	ENSMNEG00000030406	LARP1B	52	85.833	Macaca_nemestrina
ENSPTIG00000011225	LARP1B	98	82.490	ENSMLEG00000009306	LARP1B	55	82.812	Mandrillus_leucophaeus
ENSPTIG00000011225	LARP1B	99	50.376	ENSMAMG00000000081	larp1b	52	51.434	Mastacembelus_armatus
ENSPTIG00000011225	LARP1B	83	54.525	ENSMZEG00005002545	larp1b	90	54.746	Maylandia_zebra
ENSPTIG00000011225	LARP1B	98	56.000	ENSMGAG00000004809	LARP1B	60	56.752	Meleagris_gallopavo
ENSPTIG00000011225	LARP1B	100	90.149	ENSMAUG00000007879	-	100	90.149	Mesocricetus_auratus
ENSPTIG00000011225	LARP1B	98	68.824	ENSMICG00000028052	-	99	68.824	Microcebus_murinus
ENSPTIG00000011225	LARP1B	100	94.925	ENSMICG00000036111	LARP1B	100	94.925	Microcebus_murinus
ENSPTIG00000011225	LARP1B	98	78.852	ENSMICG00000037883	-	90	78.852	Microcebus_murinus
ENSPTIG00000011225	LARP1B	79	93.916	ENSMOCG00000001490	Larp1b	95	93.916	Microtus_ochrogaster
ENSPTIG00000011225	LARP1B	99	49.910	ENSMALG00000003638	larp1b	52	50.362	Monopterus_albus
ENSPTIG00000011225	LARP1B	100	89.254	MGP_CAROLIEiJ_G0024962	Larp1b	100	89.254	Mus_caroli
ENSPTIG00000011225	LARP1B	100	90.448	ENSMUSG00000025762	Larp1b	100	90.448	Mus_musculus
ENSPTIG00000011225	LARP1B	100	89.851	MGP_PahariEiJ_G0026403	Larp1b	100	89.851	Mus_pahari
ENSPTIG00000011225	LARP1B	100	90.448	MGP_SPRETEiJ_G0025897	Larp1b	100	90.448	Mus_spretus
ENSPTIG00000011225	LARP1B	98	81.885	ENSMLUG00000010229	LARP1B	59	81.885	Myotis_lucifugus
ENSPTIG00000011225	LARP1B	100	91.642	ENSNLEG00000013819	LARP1B	100	91.642	Nomascus_leucogenys
ENSPTIG00000011225	LARP1B	98	75.380	ENSOPRG00000005478	LARP1B	56	69.261	Ochotona_princeps
ENSPTIG00000011225	LARP1B	100	88.060	ENSODEG00000001292	-	100	88.060	Octodon_degus
ENSPTIG00000011225	LARP1B	97	51.603	ENSONIG00000012386	larp1b	55	51.107	Oreochromis_niloticus
ENSPTIG00000011225	LARP1B	98	93.617	ENSOCUG00000013330	LARP1B	56	91.211	Oryctolagus_cuniculus
ENSPTIG00000011225	LARP1B	98	90.606	ENSOGAG00000005771	LARP1B	59	89.669	Otolemur_garnettii
ENSPTIG00000011225	LARP1B	98	92.121	ENSOARG00000015300	LARP1B	56	90.058	Ovis_aries
ENSPTIG00000011225	LARP1B	100	91.343	ENSPPAG00000030439	LARP1B	100	91.343	Pan_paniscus
ENSPTIG00000011225	LARP1B	100	99.808	ENSPPRG00000002743	-	100	99.808	Panthera_pardus
ENSPTIG00000011225	LARP1B	100	91.045	ENSPTRG00000016437	LARP1B	100	91.045	Pan_troglodytes
ENSPTIG00000011225	LARP1B	100	92.239	ENSPANG00000012488	LARP1B	100	92.239	Papio_anubis
ENSPTIG00000011225	LARP1B	98	76.789	ENSPSIG00000012885	LARP1B	55	76.983	Pelodiscus_sinensis
ENSPTIG00000011225	LARP1B	99	44.086	ENSPMAG00000002700	larp1b	58	47.227	Petromyzon_marinus
ENSPTIG00000011225	LARP1B	99	84.776	ENSPCIG00000026516	LARP1B	87	85.455	Phascolarctos_cinereus
ENSPTIG00000011225	LARP1B	99	49.862	ENSPFOG00000019519	larp1b	50	51.601	Poecilia_formosa
ENSPTIG00000011225	LARP1B	97	52.710	ENSPFOG00000022837	-	77	53.084	Poecilia_formosa
ENSPTIG00000011225	LARP1B	80	56.338	ENSPREG00000005955	-	89	55.986	Poecilia_reticulata
ENSPTIG00000011225	LARP1B	98	87.538	ENSPCAG00000007546	LARP1B	56	85.742	Procavia_capensis
ENSPTIG00000011225	LARP1B	100	94.030	ENSPCOG00000021874	LARP1B	100	94.030	Propithecus_coquereli
ENSPTIG00000011225	LARP1B	98	87.500	ENSPVAG00000005373	LARP1B	57	87.500	Pteropus_vampyrus
ENSPTIG00000011225	LARP1B	100	91.642	ENSRNOG00000038366	Larp1b	100	91.642	Rattus_norvegicus
ENSPTIG00000011225	LARP1B	100	90.448	ENSRBIG00000039982	-	100	90.448	Rhinopithecus_bieti
ENSPTIG00000011225	LARP1B	100	82.985	ENSRBIG00000038568	-	92	82.985	Rhinopithecus_bieti
ENSPTIG00000011225	LARP1B	100	92.537	ENSRROG00000030771	LARP1B	100	92.537	Rhinopithecus_roxellana
ENSPTIG00000011225	LARP1B	100	74.328	ENSRROG00000038525	-	96	74.328	Rhinopithecus_roxellana
ENSPTIG00000011225	LARP1B	98	88.182	ENSSHAG00000014474	LARP1B	77	87.549	Sarcophilus_harrisii
ENSPTIG00000011225	LARP1B	98	50.139	ENSSMAG00000006347	larp1b	54	50.547	Scophthalmus_maximus
ENSPTIG00000011225	LARP1B	99	49.548	ENSSDUG00000004182	larp1b	50	49.729	Seriola_dumerili
ENSPTIG00000011225	LARP1B	98	75.922	ENSSPUG00000011837	LARP1B	73	76.117	Sphenodon_punctatus
ENSPTIG00000011225	LARP1B	99	50.358	ENSSPAG00000017772	larp1b	51	50.717	Stegastes_partitus
ENSPTIG00000011225	LARP1B	98	93.009	ENSSSCG00000034280	LARP1B	99	89.423	Sus_scrofa
ENSPTIG00000011225	LARP1B	64	63.084	ENSSSCG00000040491	-	99	73.529	Sus_scrofa
ENSPTIG00000011225	LARP1B	73	72.539	ENSTGUG00000002098	-	54	63.360	Taeniopygia_guttata
ENSPTIG00000011225	LARP1B	98	47.163	ENSTNIG00000012398	larp1b	57	48.485	Tetraodon_nigroviridis
ENSPTIG00000011225	LARP1B	98	81.871	ENSTTRG00000012984	LARP1B	56	81.871	Tursiops_truncatus
ENSPTIG00000011225	LARP1B	100	85.373	ENSUAMG00000016938	-	91	98.225	Ursus_americanus
ENSPTIG00000011225	LARP1B	98	95.745	ENSUMAG00000007373	LARP1B	56	94.727	Ursus_maritimus
ENSPTIG00000011225	LARP1B	98	82.227	ENSVPAG00000007223	LARP1B	56	82.227	Vicugna_pacos
ENSPTIG00000011225	LARP1B	98	96.657	ENSVVUG00000011307	LARP1B	100	95.490	Vulpes_vulpes
ENSPTIG00000011225	LARP1B	98	55.577	ENSXETG00000022512	larp1b	51	55.577	Xenopus_tropicalis
ENSPTIG00000011225	LARP1B	97	52.222	ENSXMAG00000008150	larp1b	50	50.794	Xiphophorus_maculatus