EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000011230 (Gene tree)
Gene ID: 102949754
Gene Symbol: R3HCC1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 7642 bases
Position: chrKE722074.1:3051856-3059497
Accession: 102949754
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010503	R3H	PF01424.22	1.3e-12	1	1
ENSPTIP00000010485	R3H	PF01424.22	1.4e-12	1	1
ENSPTIP00000010493	R3H	PF01424.22	1.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014454	R3HCC1-202	1311	XM_007093960	ENSPTIP00000010493	436 (aa)	XP_007094022	-
ENSPTIT00000014445	R3HCC1-201	1254	-	ENSPTIP00000010485	418 (aa)	-	-
ENSPTIT00000014464	R3HCC1-203	1185	-	ENSPTIP00000010503	394 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000011230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000011230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000011230	R3HCC1	95	78.500	ENSG00000104679	R3HCC1	87	88.372	Homo_sapiens
ENSPTIG00000011230	R3HCC1	51	65.385	ENSAPOG00000003616	r3hcc1	84	33.501	Acanthochromis_polyacanthus
ENSPTIG00000011230	R3HCC1	95	91.709	ENSAMEG00000002963	R3HCC1	83	91.940	Ailuropoda_melanoleuca
ENSPTIG00000011230	R3HCC1	92	32.624	ENSACIG00000017144	r3hcc1	90	31.604	Amphilophus_citrinellus
ENSPTIG00000011230	R3HCC1	60	46.154	ENSAOCG00000003945	r3hcc1	91	34.005	Amphiprion_ocellaris
ENSPTIG00000011230	R3HCC1	92	33.249	ENSAPEG00000003613	r3hcc1	91	34.085	Amphiprion_percula
ENSPTIG00000011230	R3HCC1	54	64.583	ENSATEG00000023860	r3hcc1	99	30.415	Anabas_testudineus
ENSPTIG00000011230	R3HCC1	93	44.198	ENSACAG00000016627	R3HCC1	88	46.098	Anolis_carolinensis
ENSPTIG00000011230	R3HCC1	95	79.500	ENSANAG00000036169	R3HCC1	91	77.961	Aotus_nancymaae
ENSPTIG00000011230	R3HCC1	95	76.808	ENSBTAG00000025830	R3HCC1	87	76.750	Bos_taurus
ENSPTIG00000011230	R3HCC1	95	79.500	ENSCJAG00000020118	R3HCC1	91	77.961	Callithrix_jacchus
ENSPTIG00000011230	R3HCC1	95	86.717	ENSCAFG00000009210	R3HCC1	87	86.432	Canis_familiaris
ENSPTIG00000011230	R3HCC1	87	79.235	ENSCAFG00020012870	R3HCC1	82	78.904	Canis_lupus_dingo
ENSPTIG00000011230	R3HCC1	95	71.154	ENSCHIG00000009107	R3HCC1	90	71.084	Capra_hircus
ENSPTIG00000011230	R3HCC1	95	79.699	ENSTSYG00000000511	R3HCC1	71	79.703	Carlito_syrichta
ENSPTIG00000011230	R3HCC1	93	60.047	ENSCAPG00000015813	R3HCC1	99	59.813	Cavia_aperea
ENSPTIG00000011230	R3HCC1	95	64.598	ENSCPOG00000009696	R3HCC1	92	64.977	Cavia_porcellus
ENSPTIG00000011230	R3HCC1	95	78.750	ENSCCAG00000037811	R3HCC1	91	77.135	Cebus_capucinus
ENSPTIG00000011230	R3HCC1	95	78.500	ENSCATG00000032971	R3HCC1	91	77.686	Cercocebus_atys
ENSPTIG00000011230	R3HCC1	95	73.232	ENSCLAG00000015556	R3HCC1	76	73.165	Chinchilla_lanigera
ENSPTIG00000011230	R3HCC1	95	78.750	ENSCSAG00000016250	R3HCC1	84	78.765	Chlorocebus_sabaeus
ENSPTIG00000011230	R3HCC1	94	76.441	ENSCHOG00000000396	R3HCC1	88	75.931	Choloepus_hoffmanni
ENSPTIG00000011230	R3HCC1	95	78.500	ENSCANG00000029441	R3HCC1	91	77.686	Colobus_angolensis_palliatus
ENSPTIG00000011230	R3HCC1	95	60.948	ENSCGRG00001014977	R3hcc1	92	62.472	Cricetulus_griseus_chok1gshd
ENSPTIG00000011230	R3HCC1	95	60.948	ENSCGRG00000004454	R3hcc1	92	62.472	Cricetulus_griseus_crigri
ENSPTIG00000011230	R3HCC1	92	33.417	ENSCSEG00000005748	r3hcc1	63	46.000	Cynoglossus_semilaevis
ENSPTIG00000011230	R3HCC1	77	32.249	ENSCVAG00000002640	r3hcc1	84	32.544	Cyprinodon_variegatus
ENSPTIG00000011230	R3HCC1	92	34.536	ENSDARG00000099593	r3hcc1	88	34.190	Danio_rerio
ENSPTIG00000011230	R3HCC1	95	79.146	ENSDNOG00000007168	R3HCC1	84	78.412	Dasypus_novemcinctus
ENSPTIG00000011230	R3HCC1	95	62.921	ENSDORG00000026365	R3hcc1	91	55.955	Dipodomys_ordii
ENSPTIG00000011230	R3HCC1	95	65.835	ENSETEG00000001147	R3HCC1	89	65.679	Echinops_telfairi
ENSPTIG00000011230	R3HCC1	95	84.750	ENSEASG00005018782	R3HCC1	73	84.461	Equus_asinus_asinus
ENSPTIG00000011230	R3HCC1	95	83.750	ENSECAG00000025013	R3HCC1	89	83.500	Equus_caballus
ENSPTIG00000011230	R3HCC1	95	75.188	ENSEEUG00000011918	R3HCC1	89	74.690	Erinaceus_europaeus
ENSPTIG00000011230	R3HCC1	95	36.893	ENSELUG00000023650	r3hcc1	96	36.893	Esox_lucius
ENSPTIG00000011230	R3HCC1	95	98.741	ENSFCAG00000012395	R3HCC1	88	98.741	Felis_catus
ENSPTIG00000011230	R3HCC1	57	69.231	ENSFALG00000001646	R3HCC1	51	49.669	Ficedula_albicollis
ENSPTIG00000011230	R3HCC1	95	65.094	ENSFDAG00000001572	R3HCC1	91	64.706	Fukomys_damarensis
ENSPTIG00000011230	R3HCC1	54	61.905	ENSGMOG00000017590	-	55	61.905	Gadus_morhua
ENSPTIG00000011230	R3HCC1	94	35.427	ENSGAFG00000008747	-	92	34.826	Gambusia_affinis
ENSPTIG00000011230	R3HCC1	92	35.385	ENSGACG00000008447	r3hcc1	86	35.052	Gasterosteus_aculeatus
ENSPTIG00000011230	R3HCC1	95	79.345	ENSGGOG00000013817	R3HCC1	92	79.104	Gorilla_gorilla
ENSPTIG00000011230	R3HCC1	88	34.393	ENSHBUG00000022250	-	68	59.574	Haplochromis_burtoni
ENSPTIG00000011230	R3HCC1	95	70.455	ENSHGLG00000010517	R3HCC1	84	68.564	Heterocephalus_glaber_female
ENSPTIG00000011230	R3HCC1	95	70.455	ENSHGLG00100006388	R3HCC1	84	68.564	Heterocephalus_glaber_male
ENSPTIG00000011230	R3HCC1	92	33.163	ENSHCOG00000011745	r3hcc1	84	33.978	Hippocampus_comes
ENSPTIG00000011230	R3HCC1	93	35.550	ENSIPUG00000024504	r3hcc1	79	35.443	Ictalurus_punctatus
ENSPTIG00000011230	R3HCC1	95	65.926	ENSSTOG00000027130	R3HCC1	88	66.098	Ictidomys_tridecemlineatus
ENSPTIG00000011230	R3HCC1	95	66.353	ENSJJAG00000013075	R3hcc1	92	66.744	Jaculus_jaculus
ENSPTIG00000011230	R3HCC1	92	33.249	ENSKMAG00000000286	r3hcc1	94	34.500	Kryptolebias_marmoratus
ENSPTIG00000011230	R3HCC1	93	40.995	ENSLACG00000011894	R3HCC1	89	39.614	Latimeria_chalumnae
ENSPTIG00000011230	R3HCC1	93	35.644	ENSLOCG00000015442	r3hcc1	92	35.623	Lepisosteus_oculatus
ENSPTIG00000011230	R3HCC1	95	70.455	ENSLAFG00000016137	R3HCC1	88	70.270	Loxodonta_africana
ENSPTIG00000011230	R3HCC1	95	78.250	ENSMFAG00000032894	R3HCC1	91	77.410	Macaca_fascicularis
ENSPTIG00000011230	R3HCC1	95	78.250	ENSMMUG00000016655	R3HCC1	91	77.410	Macaca_mulatta
ENSPTIG00000011230	R3HCC1	95	78.250	ENSMNEG00000043283	R3HCC1	91	77.410	Macaca_nemestrina
ENSPTIG00000011230	R3HCC1	95	78.000	ENSMLEG00000030147	R3HCC1	91	77.410	Mandrillus_leucophaeus
ENSPTIG00000011230	R3HCC1	92	33.170	ENSMAMG00000018146	r3hcc1	94	32.924	Mastacembelus_armatus
ENSPTIG00000011230	R3HCC1	93	46.929	ENSMGAG00000001356	R3HCC1	82	46.683	Meleagris_gallopavo
ENSPTIG00000011230	R3HCC1	51	63.721	ENSMAUG00000016096	R3hcc1	92	62.187	Mesocricetus_auratus
ENSPTIG00000011230	R3HCC1	95	77.945	ENSMICG00000011146	R3HCC1	90	77.437	Microcebus_murinus
ENSPTIG00000011230	R3HCC1	95	60.000	ENSMOCG00000018508	R3hcc1	93	60.879	Microtus_ochrogaster
ENSPTIG00000011230	R3HCC1	92	47.654	ENSMODG00000016809	-	90	49.020	Monodelphis_domestica
ENSPTIG00000011230	R3HCC1	72	39.500	ENSMALG00000000731	r3hcc1	64	43.871	Monopterus_albus
ENSPTIG00000011230	R3HCC1	95	61.283	MGP_CAROLIEiJ_G0019467	R3hcc1	93	57.112	Mus_caroli
ENSPTIG00000011230	R3HCC1	95	60.177	ENSMUSG00000034194	R3hcc1	93	60.573	Mus_musculus
ENSPTIG00000011230	R3HCC1	95	59.695	MGP_PahariEiJ_G0030484	R3hcc1	75	79.874	Mus_pahari
ENSPTIG00000011230	R3HCC1	95	60.265	MGP_SPRETEiJ_G0020359	R3hcc1	93	60.175	Mus_spretus
ENSPTIG00000011230	R3HCC1	95	89.196	ENSMPUG00000003457	R3HCC1	79	89.421	Mustela_putorius_furo
ENSPTIG00000011230	R3HCC1	95	78.750	ENSMLUG00000000266	R3HCC1	84	79.250	Myotis_lucifugus
ENSPTIG00000011230	R3HCC1	95	68.735	ENSNGAG00000016747	R3hcc1	92	68.706	Nannospalax_galili
ENSPTIG00000011230	R3HCC1	67	32.714	ENSNBRG00000016975	-	67	30.657	Neolamprologus_brichardi
ENSPTIG00000011230	R3HCC1	86	76.860	ENSNLEG00000015944	R3HCC1	78	77.348	Nomascus_leucogenys
ENSPTIG00000011230	R3HCC1	95	56.683	ENSMEUG00000010587	R3HCC1	90	56.436	Notamacropus_eugenii
ENSPTIG00000011230	R3HCC1	95	67.920	ENSOPRG00000013390	R3HCC1	88	68.317	Ochotona_princeps
ENSPTIG00000011230	R3HCC1	94	65.581	ENSODEG00000007529	R3HCC1	91	65.893	Octodon_degus
ENSPTIG00000011230	R3HCC1	95	58.416	ENSOANG00000013877	R3HCC1	88	60.050	Ornithorhynchus_anatinus
ENSPTIG00000011230	R3HCC1	95	68.750	ENSOCUG00000023554	R3HCC1	78	69.173	Oryctolagus_cuniculus
ENSPTIG00000011230	R3HCC1	92	34.430	ENSORLG00000016816	r3hcc1	94	34.343	Oryzias_latipes
ENSPTIG00000011230	R3HCC1	92	33.676	ENSORLG00020012005	r3hcc1	94	34.257	Oryzias_latipes_hni
ENSPTIG00000011230	R3HCC1	92	34.783	ENSORLG00015007018	r3hcc1	94	34.343	Oryzias_latipes_hsok
ENSPTIG00000011230	R3HCC1	94	33.167	ENSOMEG00000000816	r3hcc1	95	33.422	Oryzias_melastigma
ENSPTIG00000011230	R3HCC1	95	74.121	ENSOGAG00000001291	R3HCC1	84	74.121	Otolemur_garnettii
ENSPTIG00000011230	R3HCC1	94	76.942	ENSOARG00000010146	R3HCC1	89	76.238	Ovis_aries
ENSPTIG00000011230	R3HCC1	95	78.750	ENSPPAG00000033165	R3HCC1	92	78.519	Pan_paniscus
ENSPTIG00000011230	R3HCC1	95	98.992	ENSPPRG00000002522	R3HCC1	92	99.501	Panthera_pardus
ENSPTIG00000011230	R3HCC1	95	79.250	ENSPTRG00000020076	R3HCC1	91	76.408	Pan_troglodytes
ENSPTIG00000011230	R3HCC1	95	78.500	ENSPANG00000000453	R3HCC1	91	77.686	Papio_anubis
ENSPTIG00000011230	R3HCC1	96	37.081	ENSPKIG00000014426	-	97	37.500	Paramormyrops_kingsleyae
ENSPTIG00000011230	R3HCC1	96	36.538	ENSPKIG00000020397	-	97	35.817	Paramormyrops_kingsleyae
ENSPTIG00000011230	R3HCC1	93	46.265	ENSPSIG00000017664	R3HCC1	91	45.882	Pelodiscus_sinensis
ENSPTIG00000011230	R3HCC1	95	62.443	ENSPEMG00000007118	R3hcc1	92	61.745	Peromyscus_maniculatus_bairdii
ENSPTIG00000011230	R3HCC1	95	52.555	ENSPCIG00000022718	-	83	54.342	Phascolarctos_cinereus
ENSPTIG00000011230	R3HCC1	93	37.121	ENSPFOG00000022301	r3hcc1	83	35.930	Poecilia_formosa
ENSPTIG00000011230	R3HCC1	93	37.186	ENSPLAG00000010794	r3hcc1	83	36.409	Poecilia_latipinna
ENSPTIG00000011230	R3HCC1	93	37.121	ENSPMEG00000022515	r3hcc1	83	35.930	Poecilia_mexicana
ENSPTIG00000011230	R3HCC1	95	79.750	ENSPPYG00000018436	R3HCC1	99	79.753	Pongo_abelii
ENSPTIG00000011230	R3HCC1	70	85.333	ENSPCAG00000012229	R3HCC1	64	84.516	Procavia_capensis
ENSPTIG00000011230	R3HCC1	95	77.193	ENSPCOG00000027554	R3HCC1	91	77.307	Propithecus_coquereli
ENSPTIG00000011230	R3HCC1	95	78.304	ENSPVAG00000009829	R3HCC1	88	78.272	Pteropus_vampyrus
ENSPTIG00000011230	R3HCC1	53	56.061	ENSPNAG00000023875	r3hcc1	58	56.061	Pygocentrus_nattereri
ENSPTIG00000011230	R3HCC1	95	63.029	ENSRNOG00000016777	AABR07018321.1	63	81.212	Rattus_norvegicus
ENSPTIG00000011230	R3HCC1	95	79.000	ENSRBIG00000028045	R3HCC1	92	78.765	Rhinopithecus_bieti
ENSPTIG00000011230	R3HCC1	95	79.000	ENSRROG00000031126	R3HCC1	91	78.237	Rhinopithecus_roxellana
ENSPTIG00000011230	R3HCC1	95	78.250	ENSSBOG00000022590	R3HCC1	92	78.519	Saimiri_boliviensis_boliviensis
ENSPTIG00000011230	R3HCC1	53	93.878	ENSSHAG00000016526	-	90	50.493	Sarcophilus_harrisii
ENSPTIG00000011230	R3HCC1	92	36.623	ENSSFOG00015013507	r3hcc1	94	36.364	Scleropages_formosus
ENSPTIG00000011230	R3HCC1	92	31.731	ENSSMAG00000008647	r3hcc1	95	33.077	Scophthalmus_maximus
ENSPTIG00000011230	R3HCC1	64	84.466	ENSSARG00000013514	-	60	86.275	Sorex_araneus
ENSPTIG00000011230	R3HCC1	92	33.010	ENSSPAG00000013497	r3hcc1	63	47.333	Stegastes_partitus
ENSPTIG00000011230	R3HCC1	94	72.152	ENSSSCG00000037347	-	84	69.586	Sus_scrofa
ENSPTIG00000011230	R3HCC1	96	81.188	ENSSSCG00000039915	-	92	80.446	Sus_scrofa
ENSPTIG00000011230	R3HCC1	93	34.243	ENSTRUG00000015880	r3hcc1	91	34.491	Takifugu_rubripes
ENSPTIG00000011230	R3HCC1	95	72.864	ENSTTRG00000012247	R3HCC1	87	72.292	Tursiops_truncatus
ENSPTIG00000011230	R3HCC1	95	89.698	ENSUAMG00000007344	R3HCC1	90	89.421	Ursus_americanus
ENSPTIG00000011230	R3HCC1	95	86.683	ENSVVUG00000005056	R3HCC1	87	86.432	Vulpes_vulpes
ENSPTIG00000011230	R3HCC1	92	35.878	ENSXCOG00000017626	r3hcc1	83	35.354	Xiphophorus_couchianus
ENSPTIG00000011230	R3HCC1	94	35.556	ENSXMAG00000018375	r3hcc1	93	34.230	Xiphophorus_maculatus