EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000011501 (Gene tree)
Gene ID: 102950961
Gene Symbol: PNLDC1
Alias: -
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 17906 bases
Position: chrKE722267.1:8028780-8046685
Accession: 102950961
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000010922	CAF1	PF04857.20	1.5e-71	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000014894	PNLDC1-201	1554	XM_007097267	ENSPTIP00000010922	517 (aa)	XP_007097329	-

Gene Model

Click here to download ENSPTIG00000011501's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000011501's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000011501	PNLDC1	99	83.619	ENSG00000146453	PNLDC1	97	86.056	Homo_sapiens
ENSPTIG00000011501	PNLDC1	99	87.666	ENSAMEG00000015371	PNLDC1	99	87.666	Ailuropoda_melanoleuca
ENSPTIG00000011501	PNLDC1	94	58.039	ENSAPLG00000007014	PNLDC1	97	58.039	Anas_platyrhynchos
ENSPTIG00000011501	PNLDC1	98	56.952	ENSACAG00000013667	PNLDC1	98	56.952	Anolis_carolinensis
ENSPTIG00000011501	PNLDC1	98	82.443	ENSANAG00000034713	PNLDC1	99	82.874	Aotus_nancymaae
ENSPTIG00000011501	PNLDC1	94	89.621	ENSBTAG00000015166	PNLDC1	95	89.621	Bos_taurus
ENSPTIG00000011501	PNLDC1	98	82.443	ENSCJAG00000011865	PNLDC1	99	84.554	Callithrix_jacchus
ENSPTIG00000011501	PNLDC1	99	89.773	ENSCAFG00000000740	PNLDC1	99	89.773	Canis_familiaris
ENSPTIG00000011501	PNLDC1	99	90.962	ENSCAFG00020017742	PNLDC1	99	90.962	Canis_lupus_dingo
ENSPTIG00000011501	PNLDC1	98	86.616	ENSCHIG00000003141	PNLDC1	98	86.616	Capra_hircus
ENSPTIG00000011501	PNLDC1	99	81.439	ENSTSYG00000005606	PNLDC1	99	81.439	Carlito_syrichta
ENSPTIG00000011501	PNLDC1	87	65.227	ENSCAPG00000011893	PNLDC1	89	65.227	Cavia_aperea
ENSPTIG00000011501	PNLDC1	95	78.854	ENSCPOG00000019565	PNLDC1	95	78.854	Cavia_porcellus
ENSPTIG00000011501	PNLDC1	98	82.634	ENSCCAG00000026232	PNLDC1	98	82.634	Cebus_capucinus
ENSPTIG00000011501	PNLDC1	99	82.386	ENSCATG00000033196	PNLDC1	99	82.386	Cercocebus_atys
ENSPTIG00000011501	PNLDC1	99	80.952	ENSCLAG00000003228	PNLDC1	99	80.952	Chinchilla_lanigera
ENSPTIG00000011501	PNLDC1	95	85.404	ENSCSAG00000012478	PNLDC1	97	85.404	Chlorocebus_sabaeus
ENSPTIG00000011501	PNLDC1	95	64.244	ENSCPBG00000004050	PNLDC1	99	64.244	Chrysemys_picta_bellii
ENSPTIG00000011501	PNLDC1	97	84.436	ENSCANG00000043076	PNLDC1	98	84.436	Colobus_angolensis_palliatus
ENSPTIG00000011501	PNLDC1	97	80.426	ENSCGRG00001007470	-	97	80.426	Cricetulus_griseus_chok1gshd
ENSPTIG00000011501	PNLDC1	95	65.191	ENSCGRG00001011981	-	94	65.191	Cricetulus_griseus_chok1gshd
ENSPTIG00000011501	PNLDC1	95	68.008	ENSCGRG00000003103	-	94	68.008	Cricetulus_griseus_crigri
ENSPTIG00000011501	PNLDC1	97	80.426	ENSCGRG00000010221	-	97	80.426	Cricetulus_griseus_crigri
ENSPTIG00000011501	PNLDC1	98	83.810	ENSDNOG00000013709	PNLDC1	98	83.810	Dasypus_novemcinctus
ENSPTIG00000011501	PNLDC1	99	75.518	ENSDORG00000011517	Pnldc1	98	83.548	Dipodomys_ordii
ENSPTIG00000011501	PNLDC1	91	75.207	ENSETEG00000007587	PNLDC1	98	75.207	Echinops_telfairi
ENSPTIG00000011501	PNLDC1	98	82.115	ENSEASG00005019029	PNLDC1	98	82.115	Equus_asinus_asinus
ENSPTIG00000011501	PNLDC1	98	88.359	ENSECAG00000012898	PNLDC1	98	88.359	Equus_caballus
ENSPTIG00000011501	PNLDC1	66	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSPTIG00000011501	PNLDC1	99	93.939	ENSFCAG00000002848	PNLDC1	99	93.939	Felis_catus
ENSPTIG00000011501	PNLDC1	94	56.660	ENSFALG00000012081	PNLDC1	99	56.660	Ficedula_albicollis
ENSPTIG00000011501	PNLDC1	98	81.298	ENSFDAG00000021334	PNLDC1	98	81.298	Fukomys_damarensis
ENSPTIG00000011501	PNLDC1	78	56.699	ENSGALG00000011624	PNLDC1	81	56.699	Gallus_gallus
ENSPTIG00000011501	PNLDC1	98	65.333	ENSGAGG00000015276	PNLDC1	100	67.149	Gopherus_agassizii
ENSPTIG00000011501	PNLDC1	99	83.144	ENSGGOG00000014077	PNLDC1	99	83.144	Gorilla_gorilla
ENSPTIG00000011501	PNLDC1	99	81.629	ENSHGLG00000006889	PNLDC1	99	81.629	Heterocephalus_glaber_female
ENSPTIG00000011501	PNLDC1	99	81.629	ENSHGLG00100018275	PNLDC1	99	81.629	Heterocephalus_glaber_male
ENSPTIG00000011501	PNLDC1	98	85.605	ENSSTOG00000005595	PNLDC1	98	85.605	Ictidomys_tridecemlineatus
ENSPTIG00000011501	PNLDC1	98	75.624	ENSJJAG00000009937	Pnldc1	98	75.624	Jaculus_jaculus
ENSPTIG00000011501	PNLDC1	56	88.235	ENSLAFG00000030189	PNLDC1	90	84.740	Loxodonta_africana
ENSPTIG00000011501	PNLDC1	99	83.333	ENSMFAG00000041296	PNLDC1	99	83.333	Macaca_fascicularis
ENSPTIG00000011501	PNLDC1	99	83.333	ENSMMUG00000004181	PNLDC1	99	83.333	Macaca_mulatta
ENSPTIG00000011501	PNLDC1	99	83.333	ENSMNEG00000034271	PNLDC1	99	83.333	Macaca_nemestrina
ENSPTIG00000011501	PNLDC1	99	82.261	ENSMLEG00000044059	PNLDC1	99	82.261	Mandrillus_leucophaeus
ENSPTIG00000011501	PNLDC1	94	58.250	ENSMGAG00000012470	PNLDC1	96	58.250	Meleagris_gallopavo
ENSPTIG00000011501	PNLDC1	99	62.689	ENSMAUG00000012298	Pnldc1	99	62.689	Mesocricetus_auratus
ENSPTIG00000011501	PNLDC1	99	83.144	ENSMICG00000008021	PNLDC1	99	83.144	Microcebus_murinus
ENSPTIG00000011501	PNLDC1	99	82.453	ENSMOCG00000014287	Pnldc1	99	82.453	Microtus_ochrogaster
ENSPTIG00000011501	PNLDC1	98	72.849	ENSMODG00000007420	PNLDC1	98	72.849	Monodelphis_domestica
ENSPTIG00000011501	PNLDC1	99	82.008	MGP_CAROLIEiJ_G0021045	Pnldc1	99	82.008	Mus_caroli
ENSPTIG00000011501	PNLDC1	99	82.576	ENSMUSG00000073460	Pnldc1	99	86.538	Mus_musculus
ENSPTIG00000011501	PNLDC1	99	82.576	MGP_PahariEiJ_G0023361	Pnldc1	99	82.576	Mus_pahari
ENSPTIG00000011501	PNLDC1	99	82.197	MGP_SPRETEiJ_G0021975	Pnldc1	99	82.197	Mus_spretus
ENSPTIG00000011501	PNLDC1	98	89.080	ENSMPUG00000004920	PNLDC1	98	89.080	Mustela_putorius_furo
ENSPTIG00000011501	PNLDC1	98	84.733	ENSMLUG00000000747	PNLDC1	98	84.733	Myotis_lucifugus
ENSPTIG00000011501	PNLDC1	99	82.955	ENSNGAG00000017714	Pnldc1	99	82.955	Nannospalax_galili
ENSPTIG00000011501	PNLDC1	95	84.950	ENSNLEG00000011282	PNLDC1	97	84.950	Nomascus_leucogenys
ENSPTIG00000011501	PNLDC1	59	66.885	ENSMEUG00000011926	-	64	66.885	Notamacropus_eugenii
ENSPTIG00000011501	PNLDC1	56	67.708	ENSMEUG00000014042	-	100	67.708	Notamacropus_eugenii
ENSPTIG00000011501	PNLDC1	70	80.800	ENSOPRG00000003813	PNLDC1	71	80.800	Ochotona_princeps
ENSPTIG00000011501	PNLDC1	99	80.303	ENSODEG00000008047	PNLDC1	99	80.303	Octodon_degus
ENSPTIG00000011501	PNLDC1	94	57.884	ENSOANG00000012199	PNLDC1	95	59.046	Ornithorhynchus_anatinus
ENSPTIG00000011501	PNLDC1	99	82.576	ENSOCUG00000013867	PNLDC1	99	82.576	Oryctolagus_cuniculus
ENSPTIG00000011501	PNLDC1	99	84.000	ENSOGAG00000007331	PNLDC1	99	84.000	Otolemur_garnettii
ENSPTIG00000011501	PNLDC1	98	86.424	ENSOARG00000004585	PNLDC1	98	86.424	Ovis_aries
ENSPTIG00000011501	PNLDC1	99	82.765	ENSPPAG00000026651	PNLDC1	99	82.765	Pan_paniscus
ENSPTIG00000011501	PNLDC1	99	93.939	ENSPPRG00000012854	PNLDC1	99	93.939	Panthera_pardus
ENSPTIG00000011501	PNLDC1	99	82.765	ENSPTRG00000018762	PNLDC1	97	85.149	Pan_troglodytes
ENSPTIG00000011501	PNLDC1	99	83.333	ENSPANG00000022009	PNLDC1	99	83.333	Papio_anubis
ENSPTIG00000011501	PNLDC1	50	65.637	ENSPSIG00000011419	PNLDC1	86	65.637	Pelodiscus_sinensis
ENSPTIG00000011501	PNLDC1	99	82.765	ENSPEMG00000016301	Pnldc1	99	82.765	Peromyscus_maniculatus_bairdii
ENSPTIG00000011501	PNLDC1	82	76.027	ENSPCIG00000023412	PNLDC1	100	76.027	Phascolarctos_cinereus
ENSPTIG00000011501	PNLDC1	98	77.714	ENSPPYG00000017148	PNLDC1	98	77.714	Pongo_abelii
ENSPTIG00000011501	PNLDC1	98	75.862	ENSPCAG00000014169	PNLDC1	98	75.862	Procavia_capensis
ENSPTIG00000011501	PNLDC1	99	82.955	ENSPCOG00000025722	PNLDC1	99	82.955	Propithecus_coquereli
ENSPTIG00000011501	PNLDC1	71	91.870	ENSPVAG00000005325	PNLDC1	69	91.870	Pteropus_vampyrus
ENSPTIG00000011501	PNLDC1	99	82.732	ENSRNOG00000023140	Pnldc1	99	87.421	Rattus_norvegicus
ENSPTIG00000011501	PNLDC1	99	83.333	ENSRBIG00000033806	PNLDC1	99	83.333	Rhinopithecus_bieti
ENSPTIG00000011501	PNLDC1	97	84.630	ENSRROG00000043919	PNLDC1	98	84.630	Rhinopithecus_roxellana
ENSPTIG00000011501	PNLDC1	98	82.634	ENSSBOG00000019135	PNLDC1	98	82.634	Saimiri_boliviensis_boliviensis
ENSPTIG00000011501	PNLDC1	96	74.460	ENSSHAG00000015192	PNLDC1	98	74.460	Sarcophilus_harrisii
ENSPTIG00000011501	PNLDC1	55	67.483	ENSSPUG00000004627	PNLDC1	99	66.964	Sphenodon_punctatus
ENSPTIG00000011501	PNLDC1	95	89.087	ENSSSCG00000004046	PNLDC1	98	89.087	Sus_scrofa
ENSPTIG00000011501	PNLDC1	91	57.938	ENSTGUG00000011418	PNLDC1	99	57.938	Taeniopygia_guttata
ENSPTIG00000011501	PNLDC1	96	74.952	ENSTBEG00000009131	PNLDC1	99	74.952	Tupaia_belangeri
ENSPTIG00000011501	PNLDC1	71	81.918	ENSTTRG00000010409	PNLDC1	68	81.918	Tursiops_truncatus
ENSPTIG00000011501	PNLDC1	98	77.068	ENSUAMG00000015783	PNLDC1	98	77.068	Ursus_americanus
ENSPTIG00000011501	PNLDC1	94	84.872	ENSUMAG00000011903	PNLDC1	99	84.872	Ursus_maritimus
ENSPTIG00000011501	PNLDC1	97	88.462	ENSVVUG00000006586	PNLDC1	99	91.992	Vulpes_vulpes