EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012038 (Gene tree)
Gene ID: -
Gene Symbol: PCBP3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 33026 bases
Position: chrKE721904.1:3034702-3067727
Accession: 102948850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000011850	KH_1	PF00013.29	3.4e-34	1	3
ENSPTIP00000011850	KH_1	PF00013.29	3.4e-34	2	3
ENSPTIP00000011850	KH_1	PF00013.29	3.4e-34	3	3
ENSPTIP00000011841	KH_1	PF00013.29	3.7e-34	1	3
ENSPTIP00000011841	KH_1	PF00013.29	3.7e-34	2	3
ENSPTIP00000011841	KH_1	PF00013.29	3.7e-34	3	3
ENSPTIP00000011838	KH_1	PF00013.29	5.1e-34	1	3
ENSPTIP00000011838	KH_1	PF00013.29	5.1e-34	2	3
ENSPTIP00000011838	KH_1	PF00013.29	5.1e-34	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000015850	PCBP3-202	984	-	ENSPTIP00000011841	327 (aa)	-	-
ENSPTIT00000015860	PCBP3-203	966	-	ENSPTIP00000011850	321 (aa)	-	-
ENSPTIT00000015847	PCBP3-201	1044	XM_007089740	ENSPTIP00000011838	347 (aa)	XP_007089802	-

Gene Model

Click here to download ENSPTIG00000012038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012038	PCBP3	90	55.890	ENSPTIG00000007318	PCBP1	99	55.342
ENSPTIG00000012038	PCBP3	90	67.398	ENSPTIG00000020757	PCBP2	99	67.085
ENSPTIG00000012038	PCBP3	84	51.495	ENSPTIG00000005401	PCBP4	70	50.658
ENSPTIG00000012038	PCBP3	81	63.333	ENSPTIG00000006712	-	97	63.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012038	PCBP3	100	83.558	ENSG00000183570	PCBP3	100	83.230	Homo_sapiens
ENSPTIG00000012038	PCBP3	90	62.848	ENSAPOG00000023735	zgc:110045	99	62.270	Acanthochromis_polyacanthus
ENSPTIG00000012038	PCBP3	90	56.891	ENSACIG00000002577	zgc:110045	99	56.395	Amphilophus_citrinellus
ENSPTIG00000012038	PCBP3	76	54.595	ENSAOCG00000005266	zgc:110045	97	52.427	Amphiprion_ocellaris
ENSPTIG00000012038	PCBP3	87	62.939	ENSAPEG00000000729	zgc:110045	72	62.342	Amphiprion_percula
ENSPTIG00000012038	PCBP3	63	58.222	ENSATEG00000011191	zgc:110045	65	57.456	Anabas_testudineus
ENSPTIG00000012038	PCBP3	87	63.578	ENSACLG00000019285	zgc:110045	72	62.975	Astatotilapia_calliptera
ENSPTIG00000012038	PCBP3	100	84.330	ENSBTAG00000030775	PCBP3	100	83.333	Bos_taurus
ENSPTIG00000012038	PCBP3	100	84.906	ENSCAFG00000011907	PCBP3	100	83.957	Canis_familiaris
ENSPTIG00000012038	PCBP3	99	85.319	ENSCHIG00000015841	PCBP3	98	84.341	Capra_hircus
ENSPTIG00000012038	PCBP3	76	66.524	ENSTSYG00000005254	PCBP3	94	67.760	Carlito_syrichta
ENSPTIG00000012038	PCBP3	99	67.956	ENSCAPG00000006767	PCBP3	91	67.123	Cavia_aperea
ENSPTIG00000012038	PCBP3	100	83.558	ENSCPOG00000003648	PCBP3	100	82.620	Cavia_porcellus
ENSPTIG00000012038	PCBP3	100	83.827	ENSCCAG00000024561	PCBP3	100	82.888	Cebus_capucinus
ENSPTIG00000012038	PCBP3	100	83.288	ENSCATG00000038419	PCBP3	100	82.825	Cercocebus_atys
ENSPTIG00000012038	PCBP3	100	84.367	ENSCLAG00000006667	PCBP3	100	83.422	Chinchilla_lanigera
ENSPTIG00000012038	PCBP3	100	83.019	ENSCANG00000026757	PCBP3	100	82.086	Colobus_angolensis_palliatus
ENSPTIG00000012038	PCBP3	100	83.558	ENSCGRG00001006836	Pcbp3	100	82.620	Cricetulus_griseus_chok1gshd
ENSPTIG00000012038	PCBP3	100	83.558	ENSCGRG00000001837	Pcbp3	100	82.620	Cricetulus_griseus_crigri
ENSPTIG00000012038	PCBP3	83	73.016	ENSCSEG00000010020	zgc:110045	99	61.656	Cynoglossus_semilaevis
ENSPTIG00000012038	PCBP3	73	53.769	ENSCVAG00000004726	zgc:110045	91	52.970	Cyprinodon_variegatus
ENSPTIG00000012038	PCBP3	85	57.870	ENSDARG00000057141	zgc:110045	94	56.621	Danio_rerio
ENSPTIG00000012038	PCBP3	99	81.744	ENSDNOG00000049518	PCBP3	100	80.811	Dasypus_novemcinctus
ENSPTIG00000012038	PCBP3	81	65.608	ENSDORG00000003640	Pcbp3	99	65.608	Dipodomys_ordii
ENSPTIG00000012038	PCBP3	87	56.466	ENSEBUG00000009697	zgc:110045	99	54.950	Eptatretus_burgeri
ENSPTIG00000012038	PCBP3	100	83.476	ENSEASG00005007068	PCBP3	100	82.486	Equus_asinus_asinus
ENSPTIG00000012038	PCBP3	100	83.761	ENSECAG00000012413	PCBP3	100	82.768	Equus_caballus
ENSPTIG00000012038	PCBP3	87	62.540	ENSELUG00000019784	zgc:110045	72	61.587	Esox_lucius
ENSPTIG00000012038	PCBP3	100	86.253	ENSFCAG00000014812	PCBP3	100	85.294	Felis_catus
ENSPTIG00000012038	PCBP3	100	83.827	ENSFDAG00000009117	PCBP3	100	82.888	Fukomys_damarensis
ENSPTIG00000012038	PCBP3	87	53.116	ENSFHEG00000018838	-	99	53.116	Fundulus_heteroclitus
ENSPTIG00000012038	PCBP3	88	60.245	ENSGMOG00000005953	zgc:110045	98	59.697	Gadus_morhua
ENSPTIG00000012038	PCBP3	83	73.810	ENSGAFG00000017864	zgc:110045	93	57.009	Gambusia_affinis
ENSPTIG00000012038	PCBP3	90	63.272	ENSGACG00000003044	zgc:110045	99	62.691	Gasterosteus_aculeatus
ENSPTIG00000012038	PCBP3	100	83.288	ENSGGOG00000003683	PCBP3	100	82.353	Gorilla_gorilla
ENSPTIG00000012038	PCBP3	90	63.467	ENSHBUG00000012495	zgc:110045	99	62.883	Haplochromis_burtoni
ENSPTIG00000012038	PCBP3	99	83.379	ENSHGLG00000018620	PCBP3	100	81.513	Heterocephalus_glaber_female
ENSPTIG00000012038	PCBP3	99	83.379	ENSHGLG00100013590	PCBP3	100	81.513	Heterocephalus_glaber_male
ENSPTIG00000012038	PCBP3	89	53.651	ENSHCOG00000000818	zgc:110045	99	53.145	Hippocampus_comes
ENSPTIG00000012038	PCBP3	82	57.609	ENSIPUG00000003932	zgc:110045	77	55.072	Ictalurus_punctatus
ENSPTIG00000012038	PCBP3	100	83.827	ENSSTOG00000007178	PCBP3	100	82.888	Ictidomys_tridecemlineatus
ENSPTIG00000012038	PCBP3	100	83.827	ENSJJAG00000021192	Pcbp3	100	82.888	Jaculus_jaculus
ENSPTIG00000012038	PCBP3	83	58.947	ENSKMAG00000016179	-	90	58.031	Kryptolebias_marmoratus
ENSPTIG00000012038	PCBP3	90	57.864	ENSLBEG00000023074	zgc:110045	99	57.353	Labrus_bergylta
ENSPTIG00000012038	PCBP3	91	83.186	ENSLAFG00000020835	PCBP3	100	82.164	Loxodonta_africana
ENSPTIG00000012038	PCBP3	100	83.288	ENSMFAG00000034574	PCBP3	100	82.353	Macaca_fascicularis
ENSPTIG00000012038	PCBP3	100	83.288	ENSMMUG00000003825	PCBP3	100	82.353	Macaca_mulatta
ENSPTIG00000012038	PCBP3	100	83.288	ENSMNEG00000035551	PCBP3	100	82.919	Macaca_nemestrina
ENSPTIG00000012038	PCBP3	100	83.288	ENSMLEG00000038785	PCBP3	100	82.353	Mandrillus_leucophaeus
ENSPTIG00000012038	PCBP3	87	63.141	ENSMAMG00000014389	zgc:110045	99	62.540	Mastacembelus_armatus
ENSPTIG00000012038	PCBP3	87	63.578	ENSMZEG00005011785	zgc:110045	72	62.975	Maylandia_zebra
ENSPTIG00000012038	PCBP3	100	83.558	ENSMAUG00000007036	Pcbp3	100	82.620	Mesocricetus_auratus
ENSPTIG00000012038	PCBP3	100	83.827	ENSMICG00000012679	PCBP3	100	82.888	Microcebus_murinus
ENSPTIG00000012038	PCBP3	100	83.558	ENSMOCG00000016127	Pcbp3	100	82.620	Microtus_ochrogaster
ENSPTIG00000012038	PCBP3	76	56.593	ENSMMOG00000008399	zgc:110045	85	59.887	Mola_mola
ENSPTIG00000012038	PCBP3	67	72.500	ENSMALG00000008763	zgc:110045	90	56.842	Monopterus_albus
ENSPTIG00000012038	PCBP3	100	83.827	MGP_CAROLIEiJ_G0015475	Pcbp3	94	98.675	Mus_caroli
ENSPTIG00000012038	PCBP3	100	83.558	ENSMUSG00000001120	Pcbp3	93	98.675	Mus_musculus
ENSPTIG00000012038	PCBP3	100	83.827	MGP_PahariEiJ_G0030889	Pcbp3	94	98.675	Mus_pahari
ENSPTIG00000012038	PCBP3	100	83.827	MGP_SPRETEiJ_G0016288	Pcbp3	94	98.675	Mus_spretus
ENSPTIG00000012038	PCBP3	99	80.109	ENSMLUG00000003074	PCBP3	99	79.189	Myotis_lucifugus
ENSPTIG00000012038	PCBP3	100	83.558	ENSNGAG00000005416	Pcbp3	100	82.620	Nannospalax_galili
ENSPTIG00000012038	PCBP3	87	63.578	ENSNBRG00000017646	zgc:110045	72	62.975	Neolamprologus_brichardi
ENSPTIG00000012038	PCBP3	100	83.827	ENSNLEG00000002639	PCBP3	100	82.888	Nomascus_leucogenys
ENSPTIG00000012038	PCBP3	91	74.033	ENSMEUG00000012960	PCBP3	100	73.151	Notamacropus_eugenii
ENSPTIG00000012038	PCBP3	99	84.298	ENSODEG00000012873	PCBP3	100	83.333	Octodon_degus
ENSPTIG00000012038	PCBP3	87	63.578	ENSONIG00000010370	zgc:110045	76	62.975	Oreochromis_niloticus
ENSPTIG00000012038	PCBP3	85	71.731	ENSOANG00000006265	PCBP3	99	70.629	Ornithorhynchus_anatinus
ENSPTIG00000012038	PCBP3	87	63.259	ENSORLG00000014385	-	72	62.658	Oryzias_latipes
ENSPTIG00000012038	PCBP3	87	62.939	ENSORLG00020003139	zgc:110045	86	55.288	Oryzias_latipes_hni
ENSPTIG00000012038	PCBP3	87	62.939	ENSOMEG00000015459	-	72	62.342	Oryzias_melastigma
ENSPTIG00000012038	PCBP3	100	78.495	ENSOARG00000012704	PCBP3	100	77.600	Ovis_aries
ENSPTIG00000012038	PCBP3	100	83.288	ENSPPAG00000021940	PCBP3	100	82.353	Pan_paniscus
ENSPTIG00000012038	PCBP3	100	86.253	ENSPPRG00000003933	PCBP3	100	85.294	Panthera_pardus
ENSPTIG00000012038	PCBP3	99	70.739	ENSPTRG00000014010	PCBP3	99	69.602	Pan_troglodytes
ENSPTIG00000012038	PCBP3	100	83.288	ENSPANG00000023631	PCBP3	100	82.353	Papio_anubis
ENSPTIG00000012038	PCBP3	71	55.612	ENSPMGG00000022531	-	92	55.102	Periophthalmus_magnuspinnatus
ENSPTIG00000012038	PCBP3	87	55.346	ENSPMGG00000021588	-	72	54.403	Periophthalmus_magnuspinnatus
ENSPTIG00000012038	PCBP3	100	83.558	ENSPEMG00000000587	Pcbp3	100	82.620	Peromyscus_maniculatus_bairdii
ENSPTIG00000012038	PCBP3	88	62.579	ENSPFOG00000002348	zgc:110045	98	61.994	Poecilia_formosa
ENSPTIG00000012038	PCBP3	75	56.585	ENSPLAG00000017488	zgc:110045	93	55.769	Poecilia_latipinna
ENSPTIG00000012038	PCBP3	83	73.810	ENSPMEG00000012762	zgc:110045	92	60.968	Poecilia_mexicana
ENSPTIG00000012038	PCBP3	83	73.810	ENSPREG00000001797	zgc:110045	94	56.744	Poecilia_reticulata
ENSPTIG00000012038	PCBP3	78	78.125	ENSPPYG00000011525	-	94	76.834	Pongo_abelii
ENSPTIG00000012038	PCBP3	87	62.000	ENSPCAG00000001454	PCBP3	100	61.190	Procavia_capensis
ENSPTIG00000012038	PCBP3	100	83.827	ENSPCOG00000013797	PCBP3	100	82.888	Propithecus_coquereli
ENSPTIG00000012038	PCBP3	90	68.261	ENSPVAG00000000832	PCBP3	83	68.254	Pteropus_vampyrus
ENSPTIG00000012038	PCBP3	75	57.073	ENSPNYG00000004637	zgc:110045	96	56.250	Pundamilia_nyererei
ENSPTIG00000012038	PCBP3	87	59.242	ENSPNAG00000004501	zgc:110045	94	57.944	Pygocentrus_nattereri
ENSPTIG00000012038	PCBP3	100	83.288	ENSRROG00000034567	PCBP3	100	82.353	Rhinopithecus_roxellana
ENSPTIG00000012038	PCBP3	100	83.288	ENSSBOG00000005789	PCBP3	100	82.353	Saimiri_boliviensis_boliviensis
ENSPTIG00000012038	PCBP3	83	73.810	ENSSMAG00000013541	zgc:110045	91	56.164	Scophthalmus_maximus
ENSPTIG00000012038	PCBP3	63	60.965	ENSSDUG00000019371	zgc:110045	66	60.173	Seriola_dumerili
ENSPTIG00000012038	PCBP3	87	63.259	ENSSLDG00000021064	zgc:110045	72	62.658	Seriola_lalandi_dorsalis
ENSPTIG00000012038	PCBP3	63	96.154	ENSSARG00000007629	-	72	100.000	Sorex_araneus
ENSPTIG00000012038	PCBP3	90	63.158	ENSSPAG00000000563	zgc:110045	99	62.577	Stegastes_partitus
ENSPTIG00000012038	PCBP3	100	83.761	ENSSSCG00000023041	PCBP3	100	82.768	Sus_scrofa
ENSPTIG00000012038	PCBP3	85	60.753	ENSTRUG00000017789	zgc:110045	92	59.788	Takifugu_rubripes
ENSPTIG00000012038	PCBP3	80	57.803	ENSTNIG00000003546	zgc:110045	97	50.485	Tetraodon_nigroviridis
ENSPTIG00000012038	PCBP3	100	86.027	ENSUAMG00000006491	PCBP3	100	85.054	Ursus_americanus
ENSPTIG00000012038	PCBP3	100	76.503	ENSUMAG00000025403	PCBP3	100	76.503	Ursus_maritimus
ENSPTIG00000012038	PCBP3	99	83.380	ENSVVUG00000023862	PCBP3	95	82.418	Vulpes_vulpes
ENSPTIG00000012038	PCBP3	55	74.783	ENSXCOG00000005968	zgc:110045	76	74.783	Xiphophorus_couchianus
ENSPTIG00000012038	PCBP3	87	63.259	ENSXMAG00000008030	zgc:110045	72	62.658	Xiphophorus_maculatus