EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012200 (Gene tree)
Gene ID: 102972911
Gene Symbol: RAD54L
Alias: -
Full Name: RAD54 like
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 25644 bases
Position: chrKE721694.1:7342558-7368201
Accession: 102972911
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000011966	ResIII	PF04851.15	1.9e-08	1	1
ENSPTIP00000011966	DEAD	PF00270.29	1.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000015978	RAD54L-201	3424	XM_007077258	ENSPTIP00000011966	747 (aa)	XP_007077320	UPI00042BB524

Gene Model

Click here to download ENSPTIG00000012200's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012200	RAD54L	85	43.852	ENSPTIG00000012670	-	91	43.852
ENSPTIG00000012200	RAD54L	68	30.142	ENSPTIG00000009148	ERCC6L2	77	30.142

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012200	RAD54L	99	94.102	ENSG00000085999	RAD54L	100	98.667	Homo_sapiens
ENSPTIG00000012200	RAD54L	99	75.908	ENSAPOG00000011643	rad54l	99	75.908	Acanthochromis_polyacanthus
ENSPTIG00000012200	RAD54L	99	97.047	ENSAMEG00000013902	RAD54L	99	97.047	Ailuropoda_melanoleuca
ENSPTIG00000012200	RAD54L	99	76.510	ENSACIG00000001939	rad54l	99	76.779	Amphilophus_citrinellus
ENSPTIG00000012200	RAD54L	99	78.869	ENSAOCG00000017576	rad54l	99	78.869	Amphiprion_ocellaris
ENSPTIG00000012200	RAD54L	94	80.654	ENSAPEG00000020658	rad54l	97	80.654	Amphiprion_percula
ENSPTIG00000012200	RAD54L	94	81.508	ENSATEG00000006767	rad54l	99	81.508	Anabas_testudineus
ENSPTIG00000012200	RAD54L	94	85.938	ENSAPLG00000006389	RAD54L	99	85.938	Anas_platyrhynchos
ENSPTIG00000012200	RAD54L	99	83.936	ENSACAG00000002312	RAD54L	99	83.936	Anolis_carolinensis
ENSPTIG00000012200	RAD54L	99	93.298	ENSANAG00000035439	RAD54L	99	93.298	Aotus_nancymaae
ENSPTIG00000012200	RAD54L	99	76.139	ENSACLG00000018711	rad54l	99	76.139	Astatotilapia_calliptera
ENSPTIG00000012200	RAD54L	99	78.954	ENSAMXG00000012777	rad54l	99	78.954	Astyanax_mexicanus
ENSPTIG00000012200	RAD54L	100	94.652	ENSBTAG00000019901	RAD54L	99	94.652	Bos_taurus
ENSPTIG00000012200	RAD54L	93	58.393	WBGene00004298	rad-54	84	58.393	Caenorhabditis_elegans
ENSPTIG00000012200	RAD54L	99	90.909	ENSCJAG00000021080	RAD54L	94	93.594	Callithrix_jacchus
ENSPTIG00000012200	RAD54L	99	96.917	ENSCAFG00000004272	RAD54L	99	96.917	Canis_familiaris
ENSPTIG00000012200	RAD54L	99	96.913	ENSCAFG00020015066	RAD54L	99	96.913	Canis_lupus_dingo
ENSPTIG00000012200	RAD54L	99	94.244	ENSCHIG00000020118	RAD54L	99	94.244	Capra_hircus
ENSPTIG00000012200	RAD54L	99	92.503	ENSTSYG00000002032	RAD54L	99	92.503	Carlito_syrichta
ENSPTIG00000012200	RAD54L	100	94.511	ENSCPOG00000006768	RAD54L	99	94.511	Cavia_porcellus
ENSPTIG00000012200	RAD54L	99	93.968	ENSCCAG00000025783	RAD54L	99	93.968	Cebus_capucinus
ENSPTIG00000012200	RAD54L	99	93.700	ENSCATG00000030589	RAD54L	99	93.700	Cercocebus_atys
ENSPTIG00000012200	RAD54L	100	94.110	ENSCLAG00000004645	RAD54L	99	94.110	Chinchilla_lanigera
ENSPTIG00000012200	RAD54L	99	93.834	ENSCSAG00000001229	RAD54L	99	93.834	Chlorocebus_sabaeus
ENSPTIG00000012200	RAD54L	99	85.676	ENSCPBG00000005675	RAD54L	99	85.676	Chrysemys_picta_bellii
ENSPTIG00000012200	RAD54L	99	62.452	ENSCING00000024456	-	99	62.452	Ciona_intestinalis
ENSPTIG00000012200	RAD54L	99	62.240	ENSCSAVG00000010859	-	99	62.240	Ciona_savignyi
ENSPTIG00000012200	RAD54L	99	93.566	ENSCANG00000034891	RAD54L	99	93.566	Colobus_angolensis_palliatus
ENSPTIG00000012200	RAD54L	100	92.637	ENSCGRG00001014807	Rad54l	100	92.637	Cricetulus_griseus_chok1gshd
ENSPTIG00000012200	RAD54L	100	92.637	ENSCGRG00000016038	Rad54l	100	92.637	Cricetulus_griseus_crigri
ENSPTIG00000012200	RAD54L	99	77.181	ENSCSEG00000001983	rad54l	99	77.181	Cynoglossus_semilaevis
ENSPTIG00000012200	RAD54L	87	79.447	ENSCVAG00000019561	rad54l	99	79.447	Cyprinodon_variegatus
ENSPTIG00000012200	RAD54L	99	78.820	ENSDARG00000018623	rad54l	99	78.820	Danio_rerio
ENSPTIG00000012200	RAD54L	100	92.503	ENSDNOG00000003395	RAD54L	100	92.503	Dasypus_novemcinctus
ENSPTIG00000012200	RAD54L	99	82.299	ENSDORG00000002632	Rad54l	99	82.695	Dipodomys_ordii
ENSPTIG00000012200	RAD54L	99	54.557	FBgn0002989	okr	95	54.557	Drosophila_melanogaster
ENSPTIG00000012200	RAD54L	78	93.548	ENSETEG00000000550	RAD54L	78	93.548	Echinops_telfairi
ENSPTIG00000012200	RAD54L	99	95.570	ENSEASG00005004511	RAD54L	99	95.570	Equus_asinus_asinus
ENSPTIG00000012200	RAD54L	99	95.979	ENSECAG00000008760	RAD54L	99	96.748	Equus_caballus
ENSPTIG00000012200	RAD54L	100	88.621	ENSEEUG00000008113	RAD54L	100	88.621	Erinaceus_europaeus
ENSPTIG00000012200	RAD54L	99	79.573	ENSELUG00000002295	rad54l	99	79.573	Esox_lucius
ENSPTIG00000012200	RAD54L	100	99.866	ENSFCAG00000003444	RAD54L	100	99.866	Felis_catus
ENSPTIG00000012200	RAD54L	99	84.337	ENSFALG00000009480	RAD54L	99	84.337	Ficedula_albicollis
ENSPTIG00000012200	RAD54L	99	94.236	ENSFDAG00000007806	RAD54L	99	94.236	Fukomys_damarensis
ENSPTIG00000012200	RAD54L	61	76.872	ENSFHEG00000009824	rad54l	78	76.872	Fundulus_heteroclitus
ENSPTIG00000012200	RAD54L	99	78.121	ENSGMOG00000014568	rad54l	99	78.121	Gadus_morhua
ENSPTIG00000012200	RAD54L	99	84.182	ENSGALG00000010356	RAD54L	92	84.182	Gallus_gallus
ENSPTIG00000012200	RAD54L	91	78.351	ENSGAFG00000011110	rad54l	100	78.351	Gambusia_affinis
ENSPTIG00000012200	RAD54L	99	78.046	ENSGACG00000003111	rad54l	97	78.046	Gasterosteus_aculeatus
ENSPTIG00000012200	RAD54L	99	85.255	ENSGAGG00000014089	RAD54L	96	85.255	Gopherus_agassizii
ENSPTIG00000012200	RAD54L	99	93.968	ENSGGOG00000010602	RAD54L	99	93.968	Gorilla_gorilla
ENSPTIG00000012200	RAD54L	99	76.439	ENSHBUG00000007793	rad54l	99	76.439	Haplochromis_burtoni
ENSPTIG00000012200	RAD54L	99	93.834	ENSHGLG00000000753	RAD54L	99	93.834	Heterocephalus_glaber_female
ENSPTIG00000012200	RAD54L	99	93.834	ENSHGLG00100016987	RAD54L	99	93.834	Heterocephalus_glaber_male
ENSPTIG00000012200	RAD54L	99	77.600	ENSIPUG00000015999	rad54l	99	80.687	Ictalurus_punctatus
ENSPTIG00000012200	RAD54L	99	94.102	ENSSTOG00000029125	RAD54L	99	94.102	Ictidomys_tridecemlineatus
ENSPTIG00000012200	RAD54L	99	79.866	ENSJJAG00000000235	-	99	79.866	Jaculus_jaculus
ENSPTIG00000012200	RAD54L	99	77.957	ENSKMAG00000009944	rad54l	99	77.957	Kryptolebias_marmoratus
ENSPTIG00000012200	RAD54L	99	78.898	ENSLBEG00000014617	rad54l	99	81.314	Labrus_bergylta
ENSPTIG00000012200	RAD54L	99	80.295	ENSLOCG00000004144	rad54l	100	82.047	Lepisosteus_oculatus
ENSPTIG00000012200	RAD54L	99	93.960	ENSLAFG00000007583	RAD54L	99	93.960	Loxodonta_africana
ENSPTIG00000012200	RAD54L	99	93.700	ENSMFAG00000031241	RAD54L	99	93.700	Macaca_fascicularis
ENSPTIG00000012200	RAD54L	99	93.700	ENSMMUG00000011568	RAD54L	99	93.700	Macaca_mulatta
ENSPTIG00000012200	RAD54L	99	93.700	ENSMNEG00000038562	RAD54L	99	93.700	Macaca_nemestrina
ENSPTIG00000012200	RAD54L	99	93.834	ENSMLEG00000038145	RAD54L	99	93.834	Mandrillus_leucophaeus
ENSPTIG00000012200	RAD54L	99	78.476	ENSMAMG00000022180	rad54l	100	81.378	Mastacembelus_armatus
ENSPTIG00000012200	RAD54L	99	76.005	ENSMZEG00005018081	rad54l	99	76.005	Maylandia_zebra
ENSPTIG00000012200	RAD54L	99	84.027	ENSMGAG00000010634	RAD54L	99	84.027	Meleagris_gallopavo
ENSPTIG00000012200	RAD54L	100	92.236	ENSMAUG00000020076	Rad54l	100	92.236	Mesocricetus_auratus
ENSPTIG00000012200	RAD54L	99	93.834	ENSMICG00000003266	RAD54L	99	93.834	Microcebus_murinus
ENSPTIG00000012200	RAD54L	100	93.307	ENSMOCG00000001778	Rad54l	100	93.307	Microtus_ochrogaster
ENSPTIG00000012200	RAD54L	99	75.436	ENSMALG00000021148	rad54l	99	75.436	Monopterus_albus
ENSPTIG00000012200	RAD54L	100	88.672	MGP_CAROLIEiJ_G0026325	Rad54l	100	88.672	Mus_caroli
ENSPTIG00000012200	RAD54L	100	93.574	ENSMUSG00000028702	Rad54l	100	93.574	Mus_musculus
ENSPTIG00000012200	RAD54L	100	93.173	MGP_PahariEiJ_G0028657	Rad54l	100	93.173	Mus_pahari
ENSPTIG00000012200	RAD54L	100	93.708	MGP_SPRETEiJ_G0027297	Rad54l	100	93.708	Mus_spretus
ENSPTIG00000012200	RAD54L	99	95.850	ENSMPUG00000012883	RAD54L	99	95.850	Mustela_putorius_furo
ENSPTIG00000012200	RAD54L	99	95.570	ENSMLUG00000003763	RAD54L	99	95.570	Myotis_lucifugus
ENSPTIG00000012200	RAD54L	100	91.834	ENSNGAG00000024213	Rad54l	100	91.834	Nannospalax_galili
ENSPTIG00000012200	RAD54L	99	93.566	ENSNLEG00000016548	RAD54L	99	93.566	Nomascus_leucogenys
ENSPTIG00000012200	RAD54L	90	84.763	ENSMEUG00000006793	RAD54L	99	84.763	Notamacropus_eugenii
ENSPTIG00000012200	RAD54L	91	93.403	ENSOPRG00000016016	RAD54L	91	93.403	Ochotona_princeps
ENSPTIG00000012200	RAD54L	100	94.244	ENSODEG00000008519	RAD54L	99	94.244	Octodon_degus
ENSPTIG00000012200	RAD54L	99	76.273	ENSONIG00000007659	rad54l	99	76.273	Oreochromis_niloticus
ENSPTIG00000012200	RAD54L	100	93.842	ENSOCUG00000005229	RAD54L	100	93.842	Oryctolagus_cuniculus
ENSPTIG00000012200	RAD54L	99	75.973	ENSORLG00000002958	rad54l	99	76.510	Oryzias_latipes
ENSPTIG00000012200	RAD54L	99	76.644	ENSORLG00020006554	rad54l	99	80.294	Oryzias_latipes_hni
ENSPTIG00000012200	RAD54L	99	76.913	ENSORLG00015002907	rad54l	99	76.913	Oryzias_latipes_hsok
ENSPTIG00000012200	RAD54L	99	77.047	ENSOMEG00000007770	rad54l	99	77.047	Oryzias_melastigma
ENSPTIG00000012200	RAD54L	100	93.992	ENSOARG00000002264	RAD54L	99	93.992	Ovis_aries
ENSPTIG00000012200	RAD54L	99	94.102	ENSPPAG00000031222	RAD54L	99	94.102	Pan_paniscus
ENSPTIG00000012200	RAD54L	100	100.000	ENSPPRG00000010317	RAD54L	100	100.000	Panthera_pardus
ENSPTIG00000012200	RAD54L	99	93.968	ENSPTRG00000000689	RAD54L	99	93.968	Pan_troglodytes
ENSPTIG00000012200	RAD54L	99	93.834	ENSPANG00000016295	RAD54L	99	93.834	Papio_anubis
ENSPTIG00000012200	RAD54L	99	76.344	ENSPKIG00000016172	rad54l	99	76.344	Paramormyrops_kingsleyae
ENSPTIG00000012200	RAD54L	99	85.230	ENSPSIG00000003258	RAD54L	99	85.230	Pelodiscus_sinensis
ENSPTIG00000012200	RAD54L	99	74.397	ENSPMGG00000016335	rad54l	99	74.397	Periophthalmus_magnuspinnatus
ENSPTIG00000012200	RAD54L	100	92.905	ENSPEMG00000011422	Rad54l	100	92.905	Peromyscus_maniculatus_bairdii
ENSPTIG00000012200	RAD54L	99	70.494	ENSPMAG00000007719	rad54l	99	70.494	Petromyzon_marinus
ENSPTIG00000012200	RAD54L	99	87.399	ENSPCIG00000029032	RAD54L	99	87.399	Phascolarctos_cinereus
ENSPTIG00000012200	RAD54L	85	80.945	ENSPFOG00000013732	rad54l	99	80.945	Poecilia_formosa
ENSPTIG00000012200	RAD54L	81	79.545	ENSPLAG00000023416	rad54l	99	79.545	Poecilia_latipinna
ENSPTIG00000012200	RAD54L	91	78.498	ENSPMEG00000008299	rad54l	100	78.498	Poecilia_mexicana
ENSPTIG00000012200	RAD54L	99	76.841	ENSPREG00000019955	rad54l	99	76.841	Poecilia_reticulata
ENSPTIG00000012200	RAD54L	93	93.761	ENSPPYG00000001398	RAD54L	99	93.761	Pongo_abelii
ENSPTIG00000012200	RAD54L	80	91.262	ENSPCAG00000005323	RAD54L	80	91.262	Procavia_capensis
ENSPTIG00000012200	RAD54L	100	94.110	ENSPCOG00000015423	RAD54L	100	94.110	Propithecus_coquereli
ENSPTIG00000012200	RAD54L	99	72.812	ENSPNYG00000002942	rad54l	99	72.812	Pundamilia_nyererei
ENSPTIG00000012200	RAD54L	99	78.686	ENSPNAG00000012483	rad54l	99	78.686	Pygocentrus_nattereri
ENSPTIG00000012200	RAD54L	100	93.173	ENSRNOG00000013148	Rad54l	99	93.173	Rattus_norvegicus
ENSPTIG00000012200	RAD54L	99	93.700	ENSRBIG00000043495	RAD54L	99	93.700	Rhinopithecus_bieti
ENSPTIG00000012200	RAD54L	99	93.700	ENSRROG00000020844	RAD54L	99	93.700	Rhinopithecus_roxellana
ENSPTIG00000012200	RAD54L	80	47.907	YGL163C	RAD54	71	48.217	Saccharomyces_cerevisiae
ENSPTIG00000012200	RAD54L	99	93.968	ENSSBOG00000024672	RAD54L	99	93.968	Saimiri_boliviensis_boliviensis
ENSPTIG00000012200	RAD54L	99	86.933	ENSSHAG00000000110	RAD54L	99	86.933	Sarcophilus_harrisii
ENSPTIG00000012200	RAD54L	99	78.686	ENSSDUG00000019147	rad54l	99	78.686	Seriola_dumerili
ENSPTIG00000012200	RAD54L	99	78.820	ENSSLDG00000012330	rad54l	99	78.820	Seriola_lalandi_dorsalis
ENSPTIG00000012200	RAD54L	83	88.443	ENSSARG00000006689	RAD54L	100	88.443	Sorex_araneus
ENSPTIG00000012200	RAD54L	99	78.091	ENSSPAG00000011016	rad54l	99	78.091	Stegastes_partitus
ENSPTIG00000012200	RAD54L	99	94.236	ENSSSCG00000003905	RAD54L	99	94.236	Sus_scrofa
ENSPTIG00000012200	RAD54L	99	83.936	ENSTGUG00000008233	RAD54L	99	84.112	Taeniopygia_guttata
ENSPTIG00000012200	RAD54L	99	74.263	ENSTRUG00000008410	rad54l	99	74.263	Takifugu_rubripes
ENSPTIG00000012200	RAD54L	99	74.228	ENSTNIG00000004716	rad54l	99	75.067	Tetraodon_nigroviridis
ENSPTIG00000012200	RAD54L	100	87.015	ENSTTRG00000006315	RAD54L	100	87.015	Tursiops_truncatus
ENSPTIG00000012200	RAD54L	99	96.626	ENSUAMG00000011824	RAD54L	99	96.626	Ursus_americanus
ENSPTIG00000012200	RAD54L	99	95.277	ENSUMAG00000023603	RAD54L	99	95.277	Ursus_maritimus
ENSPTIG00000012200	RAD54L	99	96.917	ENSVVUG00000007201	RAD54L	99	96.917	Vulpes_vulpes
ENSPTIG00000012200	RAD54L	96	77.608	ENSXETG00000004369	rad54l	99	77.608	Xenopus_tropicalis
ENSPTIG00000012200	RAD54L	55	74.272	ENSXCOG00000016028	rad54l	81	78.533	Xiphophorus_couchianus