EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012253 (Gene tree)
Gene ID: 102957655
Gene Symbol: -
Alias: -
Full Name: ribosomal protein S29
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 9637 bases
Position: chrKE722311.1:6529410-6539046
Accession: 102957655
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012023	Ribosomal_S14	PF00253.21	3.5e-15	1	1
ENSPTIP00000012033	Ribosomal_S14	PF00253.21	3.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016046	-	186	-	ENSPTIP00000012033	61 (aa)	-	UPI000DE7E175
ENSPTIT00000016036	-	332	XM_007097545	ENSPTIP00000012023	56 (aa)	XP_007097607	UPI0000001630

Gene Model

Click here to download ENSPTIG00000012253's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012253's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012253	-	100	100.000	ENSPTIG00000006207	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012253	-	96	100.000	ENSAMXG00000020569	-	93	100.000	Astyanax_mexicanus
ENSPTIG00000012253	-	100	100.000	ENSFCAG00000046197	-	100	100.000	Felis_catus
ENSPTIG00000012253	-	68	84.211	ENSPKIG00000023490	-	80	76.596	Paramormyrops_kingsleyae
ENSPTIG00000012253	-	91	66.667	ENSPREG00000014241	-	52	97.059	Poecilia_reticulata
ENSPTIG00000012253	-	89	68.000	ENSPNYG00000002710	-	63	68.000	Pundamilia_nyererei
ENSPTIG00000012253	-	89	60.000	ENSSLDG00000011464	-	93	60.000	Seriola_lalandi_dorsalis
ENSPTIG00000012253	-	88	71.429	ENSSSCG00000039388	-	88	71.429	Sus_scrofa