EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012416 (Gene tree)
Gene ID: 102949129
Gene Symbol: GFM1
Alias: -
Full Name: G elongation factor mitochondrial 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 45424 bases
Position: chrKE721838.1:6010126-6055549
Accession: 102949129
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012298	GTP_EFTU	PF00009.27	8.2e-64	1	1
ENSPTIP00000012298	GTP_EFTU_D2	PF03144.25	6.8e-17	1	1
ENSPTIP00000012298	EFG_IV	PF03764.18	7.3e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016317	GFM1-201	3286	XM_007086260	ENSPTIP00000012298	754 (aa)	XP_007086322	UPI00042BCFA8

Gene Model

Click here to download ENSPTIG00000012416's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012416's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012416	GFM1	92	33.836	ENSPTIG00000021698	GFM2	91	33.836
ENSPTIG00000012416	GFM1	53	34.951	ENSPTIG00000009828	GUF1	63	34.951
ENSPTIG00000012416	GFM1	63	31.206	ENSPTIG00000007703	EFTUD2	53	31.206
ENSPTIG00000012416	GFM1	73	38.926	ENSPTIG00000012837	EEF2	74	38.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012416	GFM1	98	92.935	ENSG00000168827	GFM1	100	100.000	Homo_sapiens
ENSPTIG00000012416	GFM1	93	77.699	ENSAPOG00000016489	gfm1	96	79.970	Acanthochromis_polyacanthus
ENSPTIG00000012416	GFM1	98	95.399	ENSAMEG00000013542	GFM1	98	95.399	Ailuropoda_melanoleuca
ENSPTIG00000012416	GFM1	96	75.758	ENSACIG00000014465	gfm1	94	75.758	Amphilophus_citrinellus
ENSPTIG00000012416	GFM1	99	78.104	ENSAOCG00000006023	gfm1	96	80.028	Amphiprion_ocellaris
ENSPTIG00000012416	GFM1	99	78.104	ENSAPEG00000024499	gfm1	99	79.777	Amphiprion_percula
ENSPTIG00000012416	GFM1	100	78.117	ENSATEG00000013789	gfm1	97	79.890	Anabas_testudineus
ENSPTIG00000012416	GFM1	96	83.609	ENSAPLG00000005022	GFM1	100	83.609	Anas_platyrhynchos
ENSPTIG00000012416	GFM1	96	82.806	ENSACAG00000006829	GFM1	98	82.806	Anolis_carolinensis
ENSPTIG00000012416	GFM1	100	91.645	ENSANAG00000035983	GFM1	98	92.643	Aotus_nancymaae
ENSPTIG00000012416	GFM1	96	81.405	ENSACLG00000016586	gfm1	99	80.082	Astatotilapia_calliptera
ENSPTIG00000012416	GFM1	100	78.175	ENSAMXG00000013435	gfm1	98	79.161	Astyanax_mexicanus
ENSPTIG00000012416	GFM1	100	95.093	ENSBTAG00000027795	GFM1	98	95.264	Bos_taurus
ENSPTIG00000012416	GFM1	97	55.767	WBGene00009246	gfm-1	99	55.615	Caenorhabditis_elegans
ENSPTIG00000012416	GFM1	100	91.777	ENSCJAG00000000363	GFM1	98	92.547	Callithrix_jacchus
ENSPTIG00000012416	GFM1	98	95.257	ENSCAFG00000009006	GFM1	100	96.598	Canis_familiaris
ENSPTIG00000012416	GFM1	98	95.535	ENSCAFG00020005878	GFM1	99	96.404	Canis_lupus_dingo
ENSPTIG00000012416	GFM1	100	94.960	ENSCHIG00000015220	GFM1	98	95.129	Capra_hircus
ENSPTIG00000012416	GFM1	100	94.164	ENSTSYG00000002013	GFM1	98	94.715	Carlito_syrichta
ENSPTIG00000012416	GFM1	96	81.319	ENSCAPG00000005699	GFM1	98	81.293	Cavia_aperea
ENSPTIG00000012416	GFM1	100	92.308	ENSCPOG00000001194	GFM1	98	92.828	Cavia_porcellus
ENSPTIG00000012416	GFM1	100	91.645	ENSCCAG00000025561	GFM1	98	92.381	Cebus_capucinus
ENSPTIG00000012416	GFM1	100	92.440	ENSCATG00000037622	GFM1	98	93.071	Cercocebus_atys
ENSPTIG00000012416	GFM1	98	91.351	ENSCLAG00000002503	GFM1	98	91.351	Chinchilla_lanigera
ENSPTIG00000012416	GFM1	100	92.573	ENSCSAG00000012162	GFM1	98	93.207	Chlorocebus_sabaeus
ENSPTIG00000012416	GFM1	100	84.085	ENSCHOG00000004867	GFM1	98	84.282	Choloepus_hoffmanni
ENSPTIG00000012416	GFM1	99	82.013	ENSCPBG00000018367	GFM1	98	82.273	Chrysemys_picta_bellii
ENSPTIG00000012416	GFM1	95	59.751	ENSCING00000011960	-	94	59.751	Ciona_intestinalis
ENSPTIG00000012416	GFM1	95	59.778	ENSCSAVG00000008514	-	99	59.778	Ciona_savignyi
ENSPTIG00000012416	GFM1	98	93.342	ENSCANG00000031714	GFM1	98	93.342	Colobus_angolensis_palliatus
ENSPTIG00000012416	GFM1	100	93.634	ENSCGRG00001022095	GFM1	98	94.046	Cricetulus_griseus_chok1gshd
ENSPTIG00000012416	GFM1	100	93.634	ENSCGRG00000012043	GFM1	98	94.046	Cricetulus_griseus_crigri
ENSPTIG00000012416	GFM1	95	76.356	ENSCSEG00000017088	gfm1	98	76.356	Cynoglossus_semilaevis
ENSPTIG00000012416	GFM1	99	80.774	ENSCVAG00000004126	gfm1	99	81.294	Cyprinodon_variegatus
ENSPTIG00000012416	GFM1	100	78.647	ENSDARG00000063624	gfm1	96	80.946	Danio_rerio
ENSPTIG00000012416	GFM1	54	91.932	ENSDNOG00000016385	-	100	91.932	Dasypus_novemcinctus
ENSPTIG00000012416	GFM1	100	90.451	ENSDORG00000014165	Gfm1	98	90.663	Dipodomys_ordii
ENSPTIG00000012416	GFM1	94	66.901	FBgn0263133	mEFG1	95	66.901	Drosophila_melanogaster
ENSPTIG00000012416	GFM1	98	82.996	ENSETEG00000019197	GFM1	98	82.996	Echinops_telfairi
ENSPTIG00000012416	GFM1	90	65.926	ENSEBUG00000012794	gfm1	99	65.926	Eptatretus_burgeri
ENSPTIG00000012416	GFM1	96	69.793	ENSEEUG00000000429	GFM1	99	69.793	Erinaceus_europaeus
ENSPTIG00000012416	GFM1	100	76.658	ENSELUG00000014728	gfm1	98	77.582	Esox_lucius
ENSPTIG00000012416	GFM1	100	99.602	ENSFCAG00000013291	GFM1	100	99.602	Felis_catus
ENSPTIG00000012416	GFM1	90	83.432	ENSFALG00000007619	GFM1	100	83.432	Ficedula_albicollis
ENSPTIG00000012416	GFM1	100	90.981	ENSFDAG00000016559	GFM1	98	91.610	Fukomys_damarensis
ENSPTIG00000012416	GFM1	100	78.912	ENSFHEG00000006091	gfm1	97	80.716	Fundulus_heteroclitus
ENSPTIG00000012416	GFM1	95	78.670	ENSGMOG00000010161	gfm1	99	78.670	Gadus_morhua
ENSPTIG00000012416	GFM1	98	81.707	ENSGALG00000009634	GFM1	99	81.707	Gallus_gallus
ENSPTIG00000012416	GFM1	100	79.708	ENSGAFG00000012527	gfm1	97	81.543	Gambusia_affinis
ENSPTIG00000012416	GFM1	99	77.719	ENSGACG00000009864	gfm1	97	79.448	Gasterosteus_aculeatus
ENSPTIG00000012416	GFM1	98	93.207	ENSGGOG00000003085	GFM1	98	93.207	Gorilla_gorilla
ENSPTIG00000012416	GFM1	96	81.543	ENSHBUG00000002120	gfm1	97	81.543	Haplochromis_burtoni
ENSPTIG00000012416	GFM1	100	91.645	ENSHGLG00000016855	GFM1	98	92.287	Heterocephalus_glaber_female
ENSPTIG00000012416	GFM1	100	91.645	ENSHGLG00100013049	GFM1	98	92.287	Heterocephalus_glaber_male
ENSPTIG00000012416	GFM1	97	79.945	ENSHCOG00000007638	gfm1	98	80.431	Hippocampus_comes
ENSPTIG00000012416	GFM1	100	78.515	ENSIPUG00000005873	gfm1	97	80.579	Ictalurus_punctatus
ENSPTIG00000012416	GFM1	98	91.734	ENSSTOG00000010150	GFM1	99	91.734	Ictidomys_tridecemlineatus
ENSPTIG00000012416	GFM1	100	92.706	ENSJJAG00000016447	Gfm1	98	93.099	Jaculus_jaculus
ENSPTIG00000012416	GFM1	96	79.752	ENSKMAG00000020768	gfm1	97	79.752	Kryptolebias_marmoratus
ENSPTIG00000012416	GFM1	93	80.484	ENSLBEG00000021315	gfm1	100	80.484	Labrus_bergylta
ENSPTIG00000012416	GFM1	100	78.780	ENSLACG00000012295	GFM1	99	80.137	Latimeria_chalumnae
ENSPTIG00000012416	GFM1	96	74.897	ENSLOCG00000003778	gfm1	99	74.897	Lepisosteus_oculatus
ENSPTIG00000012416	GFM1	99	88.889	ENSLAFG00000010945	GFM1	100	89.241	Loxodonta_africana
ENSPTIG00000012416	GFM1	100	92.706	ENSMFAG00000035731	GFM1	98	93.478	Macaca_fascicularis
ENSPTIG00000012416	GFM1	100	92.838	ENSMMUG00000004961	GFM1	98	93.614	Macaca_mulatta
ENSPTIG00000012416	GFM1	100	92.838	ENSMNEG00000033245	GFM1	98	93.478	Macaca_nemestrina
ENSPTIG00000012416	GFM1	96	91.448	ENSMLEG00000030908	GFM1	100	91.252	Mandrillus_leucophaeus
ENSPTIG00000012416	GFM1	100	78.780	ENSMAMG00000011760	gfm1	97	80.854	Mastacembelus_armatus
ENSPTIG00000012416	GFM1	96	81.543	ENSMZEG00005016639	gfm1	97	81.543	Maylandia_zebra
ENSPTIG00000012416	GFM1	96	82.759	ENSMGAG00000010641	GFM1	97	82.759	Meleagris_gallopavo
ENSPTIG00000012416	GFM1	100	93.767	ENSMAUG00000000611	Gfm1	98	94.452	Mesocricetus_auratus
ENSPTIG00000012416	GFM1	98	94.293	ENSMICG00000049086	GFM1	98	94.317	Microcebus_murinus
ENSPTIG00000012416	GFM1	100	92.971	ENSMOCG00000000465	Gfm1	98	93.234	Microtus_ochrogaster
ENSPTIG00000012416	GFM1	98	78.706	ENSMMOG00000012538	gfm1	97	80.389	Mola_mola
ENSPTIG00000012416	GFM1	99	86.309	ENSMODG00000015673	GFM1	98	87.758	Monodelphis_domestica
ENSPTIG00000012416	GFM1	99	78.792	ENSMALG00000012508	gfm1	96	80.556	Monopterus_albus
ENSPTIG00000012416	GFM1	100	92.440	MGP_CAROLIEiJ_G0025052	Gfm1	98	92.693	Mus_caroli
ENSPTIG00000012416	GFM1	100	92.573	ENSMUSG00000027774	Gfm1	98	92.828	Mus_musculus
ENSPTIG00000012416	GFM1	100	92.573	MGP_PahariEiJ_G0026495	Gfm1	98	92.828	Mus_pahari
ENSPTIG00000012416	GFM1	100	92.573	MGP_SPRETEiJ_G0025994	Gfm1	98	92.828	Mus_spretus
ENSPTIG00000012416	GFM1	100	95.491	ENSMPUG00000002859	GFM1	98	95.805	Mustela_putorius_furo
ENSPTIG00000012416	GFM1	100	94.562	ENSMLUG00000000452	GFM1	98	94.858	Myotis_lucifugus
ENSPTIG00000012416	GFM1	100	91.777	ENSNGAG00000012375	Gfm1	98	92.152	Nannospalax_galili
ENSPTIG00000012416	GFM1	96	81.655	ENSNBRG00000004631	gfm1	99	81.655	Neolamprologus_brichardi
ENSPTIG00000012416	GFM1	98	93.342	ENSNLEG00000004176	GFM1	98	93.342	Nomascus_leucogenys
ENSPTIG00000012416	GFM1	91	78.832	ENSMEUG00000007784	GFM1	100	78.832	Notamacropus_eugenii
ENSPTIG00000012416	GFM1	100	90.849	ENSOPRG00000009860	GFM1	99	92.234	Ochotona_princeps
ENSPTIG00000012416	GFM1	98	92.287	ENSODEG00000004316	GFM1	98	92.287	Octodon_degus
ENSPTIG00000012416	GFM1	96	81.543	ENSONIG00000003772	gfm1	97	81.543	Oreochromis_niloticus
ENSPTIG00000012416	GFM1	98	94.046	ENSOCUG00000013561	GFM1	98	94.046	Oryctolagus_cuniculus
ENSPTIG00000012416	GFM1	94	82.228	ENSORLG00000006487	gfm1	100	82.228	Oryzias_latipes
ENSPTIG00000012416	GFM1	96	81.680	ENSORLG00020003362	gfm1	97	81.680	Oryzias_latipes_hni
ENSPTIG00000012416	GFM1	96	81.267	ENSORLG00015005829	gfm1	97	81.267	Oryzias_latipes_hsok
ENSPTIG00000012416	GFM1	96	81.818	ENSOMEG00000012894	gfm1	97	81.818	Oryzias_melastigma
ENSPTIG00000012416	GFM1	100	93.369	ENSOGAG00000008298	GFM1	98	93.640	Otolemur_garnettii
ENSPTIG00000012416	GFM1	96	94.368	ENSOARG00000002409	GFM1	100	94.368	Ovis_aries
ENSPTIG00000012416	GFM1	98	93.207	ENSPPAG00000033881	GFM1	98	93.207	Pan_paniscus
ENSPTIG00000012416	GFM1	100	99.867	ENSPPRG00000009281	GFM1	100	99.867	Panthera_pardus
ENSPTIG00000012416	GFM1	98	93.207	ENSPTRG00000015570	GFM1	98	93.207	Pan_troglodytes
ENSPTIG00000012416	GFM1	100	92.706	ENSPANG00000016512	GFM1	98	93.342	Papio_anubis
ENSPTIG00000012416	GFM1	95	81.198	ENSPKIG00000004876	gfm1	96	81.198	Paramormyrops_kingsleyae
ENSPTIG00000012416	GFM1	99	81.745	ENSPSIG00000012567	GFM1	98	82.003	Pelodiscus_sinensis
ENSPTIG00000012416	GFM1	95	79.057	ENSPMGG00000014068	gfm1	99	79.057	Periophthalmus_magnuspinnatus
ENSPTIG00000012416	GFM1	100	93.767	ENSPEMG00000008942	Gfm1	98	94.046	Peromyscus_maniculatus_bairdii
ENSPTIG00000012416	GFM1	84	85.261	ENSPCIG00000020195	GFM1	98	85.420	Phascolarctos_cinereus
ENSPTIG00000012416	GFM1	100	80.239	ENSPFOG00000011022	gfm1	97	82.094	Poecilia_formosa
ENSPTIG00000012416	GFM1	96	81.931	ENSPLAG00000019585	gfm1	97	81.304	Poecilia_latipinna
ENSPTIG00000012416	GFM1	100	80.106	ENSPMEG00000012376	gfm1	97	81.956	Poecilia_mexicana
ENSPTIG00000012416	GFM1	100	79.841	ENSPREG00000001332	gfm1	92	81.680	Poecilia_reticulata
ENSPTIG00000012416	GFM1	98	93.478	ENSPPYG00000014244	GFM1	98	93.478	Pongo_abelii
ENSPTIG00000012416	GFM1	93	88.620	ENSPCAG00000008934	GFM1	100	88.620	Procavia_capensis
ENSPTIG00000012416	GFM1	98	94.701	ENSPCOG00000022259	GFM1	98	94.723	Propithecus_coquereli
ENSPTIG00000012416	GFM1	100	94.695	ENSPVAG00000013605	GFM1	98	94.858	Pteropus_vampyrus
ENSPTIG00000012416	GFM1	96	81.267	ENSPNYG00000006037	gfm1	100	80.244	Pundamilia_nyererei
ENSPTIG00000012416	GFM1	100	78.912	ENSPNAG00000001237	gfm1	97	80.946	Pygocentrus_nattereri
ENSPTIG00000012416	GFM1	100	92.440	ENSRNOG00000012873	Gfm1	98	93.099	Rattus_norvegicus
ENSPTIG00000012416	GFM1	98	93.207	ENSRBIG00000031363	GFM1	98	93.207	Rhinopithecus_bieti
ENSPTIG00000012416	GFM1	98	93.342	ENSRROG00000031081	GFM1	98	93.342	Rhinopithecus_roxellana
ENSPTIG00000012416	GFM1	92	56.978	YLR069C	-	90	56.978	Saccharomyces_cerevisiae
ENSPTIG00000012416	GFM1	100	92.308	ENSSBOG00000023252	GFM1	98	92.935	Saimiri_boliviensis_boliviensis
ENSPTIG00000012416	GFM1	99	86.881	ENSSHAG00000017772	GFM1	98	87.772	Sarcophilus_harrisii
ENSPTIG00000012416	GFM1	96	80.769	ENSSFOG00015003117	gfm1	99	80.769	Scleropages_formosus
ENSPTIG00000012416	GFM1	99	77.261	ENSSMAG00000013221	gfm1	97	78.512	Scophthalmus_maximus
ENSPTIG00000012416	GFM1	98	78.841	ENSSDUG00000018665	gfm1	97	79.890	Seriola_dumerili
ENSPTIG00000012416	GFM1	98	78.735	ENSSLDG00000020606	gfm1	97	79.890	Seriola_lalandi_dorsalis
ENSPTIG00000012416	GFM1	95	81.780	ENSSPUG00000018686	GFM1	97	81.780	Sphenodon_punctatus
ENSPTIG00000012416	GFM1	100	78.117	ENSSPAG00000008800	gfm1	97	80.028	Stegastes_partitus
ENSPTIG00000012416	GFM1	100	94.305	ENSSSCG00000025651	GFM1	98	94.587	Sus_scrofa
ENSPTIG00000012416	GFM1	98	78.649	ENSTRUG00000009244	gfm1	99	78.649	Takifugu_rubripes
ENSPTIG00000012416	GFM1	96	80.854	ENSTNIG00000007729	gfm1	97	80.854	Tetraodon_nigroviridis
ENSPTIG00000012416	GFM1	98	77.463	ENSTBEG00000017404	GFM1	98	77.463	Tupaia_belangeri
ENSPTIG00000012416	GFM1	100	93.008	ENSTTRG00000001735	GFM1	97	94.181	Tursiops_truncatus
ENSPTIG00000012416	GFM1	98	96.211	ENSUAMG00000026381	GFM1	98	96.211	Ursus_americanus
ENSPTIG00000012416	GFM1	98	96.076	ENSUMAG00000011268	GFM1	98	96.076	Ursus_maritimus
ENSPTIG00000012416	GFM1	100	91.512	ENSVPAG00000009444	GFM1	98	91.610	Vicugna_pacos
ENSPTIG00000012416	GFM1	99	93.600	ENSVVUG00000020091	GFM1	100	96.154	Vulpes_vulpes
ENSPTIG00000012416	GFM1	100	82.649	ENSXETG00000032551	GFM1	99	82.823	Xenopus_tropicalis
ENSPTIG00000012416	GFM1	51	80.670	ENSXCOG00000012590	gfm1	89	80.670	Xiphophorus_couchianus
ENSPTIG00000012416	GFM1	100	79.708	ENSXMAG00000000261	gfm1	97	81.543	Xiphophorus_maculatus