EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000012495 (Gene tree)
Gene ID: 102955789
Gene Symbol: SRBD1
Alias: -
Full Name: S1 RNA binding domain 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 191520 bases
Position: chrKE722317.1:14037877-14229396
Accession: 102955789
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012434	S1	PF00575.23	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016457	SRBD1-201	3588	XM_007097854	ENSPTIP00000012434	995 (aa)	XP_007097916	UPI0007662341

Gene Model

Click here to download ENSPTIG00000012495's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012495's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012495	SRBD1	100	91.055	ENSG00000068784	SRBD1	100	91.055	Homo_sapiens
ENSPTIG00000012495	SRBD1	100	51.541	ENSAPOG00000005103	si:ch211-117n7.8	83	57.733	Acanthochromis_polyacanthus
ENSPTIG00000012495	SRBD1	100	96.181	ENSAMEG00000005993	SRBD1	100	96.181	Ailuropoda_melanoleuca
ENSPTIG00000012495	SRBD1	83	58.026	ENSACIG00000009875	si:ch211-117n7.8	85	57.981	Amphilophus_citrinellus
ENSPTIG00000012495	SRBD1	99	51.855	ENSAOCG00000024718	si:ch211-117n7.8	83	58.195	Amphiprion_ocellaris
ENSPTIG00000012495	SRBD1	83	58.314	ENSAPEG00000002645	si:ch211-117n7.8	86	58.314	Amphiprion_percula
ENSPTIG00000012495	SRBD1	86	57.290	ENSATEG00000010844	si:ch211-117n7.8	86	57.290	Anabas_testudineus
ENSPTIG00000012495	SRBD1	100	70.929	ENSAPLG00000006313	SRBD1	100	70.788	Anas_platyrhynchos
ENSPTIG00000012495	SRBD1	100	90.854	ENSANAG00000025573	SRBD1	100	90.854	Aotus_nancymaae
ENSPTIG00000012495	SRBD1	84	57.043	ENSACLG00000024219	si:ch211-117n7.8	83	57.159	Astatotilapia_calliptera
ENSPTIG00000012495	SRBD1	85	60.303	ENSAMXG00000004294	SRBD1	93	56.590	Astyanax_mexicanus
ENSPTIG00000012495	SRBD1	100	91.566	ENSBTAG00000007508	SRBD1	97	92.269	Bos_taurus
ENSPTIG00000012495	SRBD1	100	90.352	ENSCJAG00000000727	SRBD1	100	90.352	Callithrix_jacchus
ENSPTIG00000012495	SRBD1	100	95.085	ENSCAFG00000002554	SRBD1	100	95.085	Canis_familiaris
ENSPTIG00000012495	SRBD1	100	92.169	ENSCAFG00020026284	SRBD1	99	93.961	Canis_lupus_dingo
ENSPTIG00000012495	SRBD1	100	91.867	ENSCHIG00000016535	SRBD1	98	92.570	Capra_hircus
ENSPTIG00000012495	SRBD1	100	92.184	ENSTSYG00000012797	SRBD1	100	92.184	Carlito_syrichta
ENSPTIG00000012495	SRBD1	100	89.960	ENSCPOG00000004773	SRBD1	100	89.960	Cavia_porcellus
ENSPTIG00000012495	SRBD1	100	91.357	ENSCCAG00000025589	SRBD1	100	91.357	Cebus_capucinus
ENSPTIG00000012495	SRBD1	100	92.060	ENSCATG00000039530	SRBD1	100	92.060	Cercocebus_atys
ENSPTIG00000012495	SRBD1	100	90.982	ENSCLAG00000008623	SRBD1	100	90.982	Chinchilla_lanigera
ENSPTIG00000012495	SRBD1	100	92.261	ENSCSAG00000013350	SRBD1	100	92.261	Chlorocebus_sabaeus
ENSPTIG00000012495	SRBD1	93	78.015	ENSCHOG00000003805	SRBD1	93	78.015	Choloepus_hoffmanni
ENSPTIG00000012495	SRBD1	100	74.148	ENSCPBG00000005677	SRBD1	100	73.922	Chrysemys_picta_bellii
ENSPTIG00000012495	SRBD1	79	42.748	ENSCING00000005950	-	99	42.748	Ciona_intestinalis
ENSPTIG00000012495	SRBD1	79	43.073	ENSCSAVG00000000861	-	99	43.073	Ciona_savignyi
ENSPTIG00000012495	SRBD1	99	91.641	ENSCANG00000016307	SRBD1	99	91.641	Colobus_angolensis_palliatus
ENSPTIG00000012495	SRBD1	100	86.044	ENSCGRG00001000513	Srbd1	100	86.044	Cricetulus_griseus_chok1gshd
ENSPTIG00000012495	SRBD1	100	86.044	ENSCGRG00000002283	Srbd1	100	86.044	Cricetulus_griseus_crigri
ENSPTIG00000012495	SRBD1	85	55.950	ENSCSEG00000000856	si:ch211-117n7.8	86	56.064	Cynoglossus_semilaevis
ENSPTIG00000012495	SRBD1	83	56.958	ENSCVAG00000020212	si:ch211-117n7.8	89	56.958	Cyprinodon_variegatus
ENSPTIG00000012495	SRBD1	100	92.092	ENSDNOG00000018686	SRBD1	100	92.092	Dasypus_novemcinctus
ENSPTIG00000012495	SRBD1	100	88.643	ENSDORG00000010468	Srbd1	100	88.643	Dipodomys_ordii
ENSPTIG00000012495	SRBD1	94	34.535	FBgn0051156	CG31156	98	34.735	Drosophila_melanogaster
ENSPTIG00000012495	SRBD1	89	83.571	ENSETEG00000000739	SRBD1	91	83.571	Echinops_telfairi
ENSPTIG00000012495	SRBD1	73	48.299	ENSEBUG00000008902	si:ch211-117n7.8	96	48.299	Eptatretus_burgeri
ENSPTIG00000012495	SRBD1	100	91.265	ENSEASG00005003132	SRBD1	97	95.541	Equus_asinus_asinus
ENSPTIG00000012495	SRBD1	100	94.679	ENSECAG00000013865	SRBD1	98	94.679	Equus_caballus
ENSPTIG00000012495	SRBD1	96	55.341	ENSELUG00000012592	si:ch211-117n7.8	91	55.341	Esox_lucius
ENSPTIG00000012495	SRBD1	100	99.197	ENSFCAG00000005101	SRBD1	100	99.197	Felis_catus
ENSPTIG00000012495	SRBD1	100	69.076	ENSFALG00000012966	SRBD1	100	68.574	Ficedula_albicollis
ENSPTIG00000012495	SRBD1	98	88.284	ENSFDAG00000016670	SRBD1	98	88.565	Fukomys_damarensis
ENSPTIG00000012495	SRBD1	96	52.911	ENSFHEG00000019480	si:ch211-117n7.8	93	52.911	Fundulus_heteroclitus
ENSPTIG00000012495	SRBD1	50	52.252	ENSGMOG00000018010	-	100	52.252	Gadus_morhua
ENSPTIG00000012495	SRBD1	100	69.652	ENSGALG00000009990	SRBD1	100	69.613	Gallus_gallus
ENSPTIG00000012495	SRBD1	98	51.292	ENSGAFG00000019664	si:ch211-117n7.8	97	51.616	Gambusia_affinis
ENSPTIG00000012495	SRBD1	62	60.960	ENSGACG00000010794	si:ch211-117n7.8	100	61.120	Gasterosteus_aculeatus
ENSPTIG00000012495	SRBD1	84	81.557	ENSGAGG00000006166	SRBD1	99	81.557	Gopherus_agassizii
ENSPTIG00000012495	SRBD1	97	91.434	ENSGGOG00000005910	SRBD1	99	91.372	Gorilla_gorilla
ENSPTIG00000012495	SRBD1	84	50.829	ENSHBUG00000013207	si:ch211-117n7.8	86	50.948	Haplochromis_burtoni
ENSPTIG00000012495	SRBD1	99	89.829	ENSHGLG00000018153	-	99	89.829	Heterocephalus_glaber_female
ENSPTIG00000012495	SRBD1	99	89.627	ENSHGLG00100015183	-	99	89.627	Heterocephalus_glaber_male
ENSPTIG00000012495	SRBD1	96	56.140	ENSIPUG00000009661	srbd1	91	58.617	Ictalurus_punctatus
ENSPTIG00000012495	SRBD1	100	91.960	ENSSTOG00000005898	SRBD1	100	91.960	Ictidomys_tridecemlineatus
ENSPTIG00000012495	SRBD1	100	81.745	ENSJJAG00000022244	Srbd1	100	81.745	Jaculus_jaculus
ENSPTIG00000012495	SRBD1	99	51.252	ENSKMAG00000003473	si:ch211-117n7.8	93	53.026	Kryptolebias_marmoratus
ENSPTIG00000012495	SRBD1	98	51.518	ENSLBEG00000027518	si:ch211-117n7.8	93	52.826	Labrus_bergylta
ENSPTIG00000012495	SRBD1	85	71.395	ENSLACG00000009790	SRBD1	100	71.395	Latimeria_chalumnae
ENSPTIG00000012495	SRBD1	100	57.879	ENSLOCG00000016360	si:ch211-117n7.8	99	57.879	Lepisosteus_oculatus
ENSPTIG00000012495	SRBD1	100	92.362	ENSMFAG00000042026	SRBD1	100	92.362	Macaca_fascicularis
ENSPTIG00000012495	SRBD1	100	92.060	ENSMMUG00000003490	SRBD1	100	92.060	Macaca_mulatta
ENSPTIG00000012495	SRBD1	100	89.648	ENSMNEG00000034701	SRBD1	100	89.648	Macaca_nemestrina
ENSPTIG00000012495	SRBD1	100	91.960	ENSMLEG00000000745	SRBD1	100	91.960	Mandrillus_leucophaeus
ENSPTIG00000012495	SRBD1	86	55.632	ENSMAMG00000021921	si:ch211-117n7.8	86	55.632	Mastacembelus_armatus
ENSPTIG00000012495	SRBD1	84	57.043	ENSMZEG00005027369	si:ch211-117n7.8	83	57.159	Maylandia_zebra
ENSPTIG00000012495	SRBD1	80	75.754	ENSMGAG00000010273	SRBD1	99	75.754	Meleagris_gallopavo
ENSPTIG00000012495	SRBD1	79	87.454	ENSMAUG00000013916	Srbd1	99	84.953	Mesocricetus_auratus
ENSPTIG00000012495	SRBD1	100	93.273	ENSMICG00000007835	SRBD1	100	93.273	Microcebus_murinus
ENSPTIG00000012495	SRBD1	100	84.940	ENSMOCG00000018716	Srbd1	100	84.940	Microtus_ochrogaster
ENSPTIG00000012495	SRBD1	84	56.353	ENSMMOG00000007507	si:ch211-117n7.8	87	56.353	Mola_mola
ENSPTIG00000012495	SRBD1	99	50.584	ENSMALG00000001562	si:ch211-117n7.8	86	55.455	Monopterus_albus
ENSPTIG00000012495	SRBD1	100	82.513	MGP_CAROLIEiJ_G0021934	Srbd1	99	83.706	Mus_caroli
ENSPTIG00000012495	SRBD1	100	82.613	ENSMUSG00000024135	Srbd1	100	82.613	Mus_musculus
ENSPTIG00000012495	SRBD1	100	81.608	MGP_PahariEiJ_G0020924	Srbd1	100	81.608	Mus_pahari
ENSPTIG00000012495	SRBD1	100	82.915	MGP_SPRETEiJ_G0022850	Srbd1	100	82.915	Mus_spretus
ENSPTIG00000012495	SRBD1	100	89.458	ENSMLUG00000007039	SRBD1	100	89.458	Myotis_lucifugus
ENSPTIG00000012495	SRBD1	100	85.142	ENSNGAG00000011893	Srbd1	100	84.751	Nannospalax_galili
ENSPTIG00000012495	SRBD1	84	56.465	ENSNBRG00000012873	si:ch211-117n7.8	85	56.584	Neolamprologus_brichardi
ENSPTIG00000012495	SRBD1	100	91.357	ENSNLEG00000016877	SRBD1	100	91.357	Nomascus_leucogenys
ENSPTIG00000012495	SRBD1	100	87.136	ENSODEG00000012095	SRBD1	100	87.136	Octodon_degus
ENSPTIG00000012495	SRBD1	96	52.798	ENSONIG00000000945	si:ch211-117n7.8	99	58.293	Oreochromis_niloticus
ENSPTIG00000012495	SRBD1	100	93.173	ENSOCUG00000015385	SRBD1	100	93.173	Oryctolagus_cuniculus
ENSPTIG00000012495	SRBD1	85	53.502	ENSORLG00000004427	si:ch211-117n7.8	84	53.502	Oryzias_latipes
ENSPTIG00000012495	SRBD1	99	50.720	ENSORLG00020012792	si:ch211-117n7.8	84	56.307	Oryzias_latipes_hni
ENSPTIG00000012495	SRBD1	85	56.207	ENSORLG00015018598	si:ch211-117n7.8	84	56.207	Oryzias_latipes_hsok
ENSPTIG00000012495	SRBD1	96	51.639	ENSOMEG00000012229	si:ch211-117n7.8	93	51.791	Oryzias_melastigma
ENSPTIG00000012495	SRBD1	100	86.446	ENSOGAG00000001076	SRBD1	100	86.446	Otolemur_garnettii
ENSPTIG00000012495	SRBD1	100	87.100	ENSOARG00000005958	SRBD1	100	87.779	Ovis_aries
ENSPTIG00000012495	SRBD1	100	91.457	ENSPPAG00000038442	SRBD1	100	91.457	Pan_paniscus
ENSPTIG00000012495	SRBD1	100	99.799	ENSPPRG00000003449	SRBD1	100	99.799	Panthera_pardus
ENSPTIG00000012495	SRBD1	100	91.457	ENSPTRG00000011889	SRBD1	100	91.457	Pan_troglodytes
ENSPTIG00000012495	SRBD1	100	91.960	ENSPANG00000008063	SRBD1	100	91.960	Papio_anubis
ENSPTIG00000012495	SRBD1	83	60.457	ENSPKIG00000021973	si:ch211-117n7.8	85	60.457	Paramormyrops_kingsleyae
ENSPTIG00000012495	SRBD1	100	74.100	ENSPSIG00000008992	SRBD1	100	74.300	Pelodiscus_sinensis
ENSPTIG00000012495	SRBD1	90	53.057	ENSPMGG00000013348	si:ch211-117n7.8	98	51.385	Periophthalmus_magnuspinnatus
ENSPTIG00000012495	SRBD1	100	83.235	ENSPEMG00000020684	Srbd1	100	83.235	Peromyscus_maniculatus_bairdii
ENSPTIG00000012495	SRBD1	98	51.572	ENSPFOG00000010650	si:ch211-117n7.8	93	53.216	Poecilia_formosa
ENSPTIG00000012495	SRBD1	98	51.434	ENSPLAG00000002141	si:ch211-117n7.8	83	56.958	Poecilia_latipinna
ENSPTIG00000012495	SRBD1	98	51.768	ENSPMEG00000018537	si:ch211-117n7.8	93	53.423	Poecilia_mexicana
ENSPTIG00000012495	SRBD1	89	54.446	ENSPREG00000003258	si:ch211-117n7.8	92	54.446	Poecilia_reticulata
ENSPTIG00000012495	SRBD1	100	83.886	ENSPPYG00000012444	SRBD1	99	83.886	Pongo_abelii
ENSPTIG00000012495	SRBD1	82	83.024	ENSPCAG00000005629	SRBD1	85	83.024	Procavia_capensis
ENSPTIG00000012495	SRBD1	100	80.480	ENSPCOG00000017669	SRBD1	100	80.480	Propithecus_coquereli
ENSPTIG00000012495	SRBD1	100	83.819	ENSPVAG00000001782	SRBD1	100	83.819	Pteropus_vampyrus
ENSPTIG00000012495	SRBD1	84	54.363	ENSPNYG00000000508	si:ch211-117n7.8	86	54.481	Pundamilia_nyererei
ENSPTIG00000012495	SRBD1	96	57.379	ENSPNAG00000013492	SRBD1	95	57.379	Pygocentrus_nattereri
ENSPTIG00000012495	SRBD1	100	81.627	ENSRNOG00000014720	Srbd1	99	82.329	Rattus_norvegicus
ENSPTIG00000012495	SRBD1	99	91.541	ENSRBIG00000033486	SRBD1	99	91.541	Rhinopithecus_bieti
ENSPTIG00000012495	SRBD1	99	91.541	ENSRROG00000041599	SRBD1	99	91.541	Rhinopithecus_roxellana
ENSPTIG00000012495	SRBD1	100	90.955	ENSSBOG00000024982	SRBD1	100	90.955	Saimiri_boliviensis_boliviensis
ENSPTIG00000012495	SRBD1	83	60.142	ENSSFOG00015001128	si:ch211-117n7.8	90	60.000	Scleropages_formosus
ENSPTIG00000012495	SRBD1	90	54.703	ENSSMAG00000018256	si:ch211-117n7.8	89	54.811	Scophthalmus_maximus
ENSPTIG00000012495	SRBD1	86	56.372	ENSSLDG00000023189	si:ch211-117n7.8	85	56.372	Seriola_lalandi_dorsalis
ENSPTIG00000012495	SRBD1	100	80.101	ENSSARG00000009740	SRBD1	100	80.101	Sorex_araneus
ENSPTIG00000012495	SRBD1	85	79.502	ENSSPUG00000010475	SRBD1	98	76.940	Sphenodon_punctatus
ENSPTIG00000012495	SRBD1	84	55.112	ENSSPAG00000008092	-	84	55.582	Stegastes_partitus
ENSPTIG00000012495	SRBD1	100	92.972	ENSSSCG00000008445	SRBD1	98	93.574	Sus_scrofa
ENSPTIG00000012495	SRBD1	83	77.711	ENSTGUG00000003878	SRBD1	100	77.711	Taeniopygia_guttata
ENSPTIG00000012495	SRBD1	99	51.011	ENSTRUG00000007080	si:ch211-117n7.8	93	57.176	Takifugu_rubripes
ENSPTIG00000012495	SRBD1	99	50.244	ENSTNIG00000007464	si:ch211-117n7.8	97	50.706	Tetraodon_nigroviridis
ENSPTIG00000012495	SRBD1	83	98.936	ENSTBEG00000004556	SRBD1	76	100.000	Tupaia_belangeri
ENSPTIG00000012495	SRBD1	94	94.470	ENSTTRG00000011871	SRBD1	94	94.470	Tursiops_truncatus
ENSPTIG00000012495	SRBD1	100	95.783	ENSUAMG00000008126	SRBD1	97	99.275	Ursus_americanus
ENSPTIG00000012495	SRBD1	100	95.783	ENSUMAG00000012902	SRBD1	98	95.783	Ursus_maritimus
ENSPTIG00000012495	SRBD1	91	93.826	ENSVPAG00000006825	SRBD1	100	93.826	Vicugna_pacos
ENSPTIG00000012495	SRBD1	100	94.679	ENSVVUG00000005389	SRBD1	100	95.281	Vulpes_vulpes
ENSPTIG00000012495	SRBD1	100	52.637	ENSXETG00000002760	srbd1	100	52.637	Xenopus_tropicalis
ENSPTIG00000012495	SRBD1	98	51.186	ENSXMAG00000016861	si:ch211-117n7.8	88	54.746	Xiphophorus_maculatus