EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000012589 (Gene tree)
Gene ID: 102971815
Gene Symbol: CNOT1
Alias: -
Full Name: CCR4-NOT transcription complex subunit 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 101662 bases
Position: chrKE721923.1:3213196-3314857
Accession: 102971815
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012584	Not1	PF04054.15	9.1e-153	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016613	CNOT1-201	8430	XM_007090231	ENSPTIP00000012584	2376 (aa)	XP_007090293	UPI00029311C7
ENSPTIT00000016630	CNOT1-202	291	-	ENSPTIP00000012600	96 (aa)	-	UPI000C2F73B7

Gene Model

Click here to download ENSPTIG00000012589's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012589's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012589	CNOT1	100	99.790	ENSG00000125107	CNOT1	100	100.000	Homo_sapiens
ENSPTIG00000012589	CNOT1	97	96.914	ENSAPOG00000005042	cnot1	100	96.914	Acanthochromis_polyacanthus
ENSPTIG00000012589	CNOT1	100	99.705	ENSAMEG00000017298	CNOT1	100	99.705	Ailuropoda_melanoleuca
ENSPTIG00000012589	CNOT1	90	89.981	ENSACIG00000016003	cnot1	100	90.261	Amphilophus_citrinellus
ENSPTIG00000012589	CNOT1	100	90.596	ENSAPEG00000022342	cnot1	100	90.512	Amphiprion_percula
ENSPTIG00000012589	CNOT1	97	97.055	ENSATEG00000012892	cnot1	100	97.055	Anabas_testudineus
ENSPTIG00000012589	CNOT1	100	97.773	ENSAPLG00000007162	CNOT1	100	97.773	Anas_platyrhynchos
ENSPTIG00000012589	CNOT1	91	96.336	ENSACAG00000001602	CNOT1	98	96.336	Anolis_carolinensis
ENSPTIG00000012589	CNOT1	100	96.900	ENSANAG00000038198	CNOT1	100	96.900	Aotus_nancymaae
ENSPTIG00000012589	CNOT1	97	97.055	ENSACLG00000014234	cnot1	100	97.055	Astatotilapia_calliptera
ENSPTIG00000012589	CNOT1	100	90.955	ENSAMXG00000013170	cnot1	100	91.505	Astyanax_mexicanus
ENSPTIG00000012589	CNOT1	100	99.874	ENSBTAG00000020782	CNOT1	100	99.874	Bos_taurus
ENSPTIG00000012589	CNOT1	81	40.440	WBGene00002845	let-711	92	54.430	Caenorhabditis_elegans
ENSPTIG00000012589	CNOT1	100	99.747	ENSCJAG00000011318	CNOT1	100	99.747	Callithrix_jacchus
ENSPTIG00000012589	CNOT1	100	99.538	ENSCAFG00000008426	CNOT1	100	99.538	Canis_familiaris
ENSPTIG00000012589	CNOT1	100	98.784	ENSCAFG00020010156	CNOT1	100	99.487	Canis_lupus_dingo
ENSPTIG00000012589	CNOT1	100	99.874	ENSCHIG00000010452	CNOT1	100	99.874	Capra_hircus
ENSPTIG00000012589	CNOT1	100	99.916	ENSTSYG00000006888	CNOT1	100	99.916	Carlito_syrichta
ENSPTIG00000012589	CNOT1	100	95.118	ENSCPOG00000013026	CNOT1	100	95.118	Cavia_porcellus
ENSPTIG00000012589	CNOT1	100	98.190	ENSCCAG00000026333	CNOT1	100	98.190	Cebus_capucinus
ENSPTIG00000012589	CNOT1	100	99.832	ENSCATG00000032625	CNOT1	100	99.832	Cercocebus_atys
ENSPTIG00000012589	CNOT1	100	99.790	ENSCLAG00000006289	CNOT1	100	99.790	Chinchilla_lanigera
ENSPTIG00000012589	CNOT1	100	99.832	ENSCSAG00000004731	CNOT1	100	99.832	Chlorocebus_sabaeus
ENSPTIG00000012589	CNOT1	81	100.000	ENSCHOG00000009712	CNOT1	83	100.000	Choloepus_hoffmanni
ENSPTIG00000012589	CNOT1	95	98.611	ENSCPBG00000026222	CNOT1	99	98.611	Chrysemys_picta_bellii
ENSPTIG00000012589	CNOT1	100	59.061	ENSCING00000009149	-	100	58.741	Ciona_intestinalis
ENSPTIG00000012589	CNOT1	89	63.020	ENSCSAVG00000002414	-	95	78.808	Ciona_savignyi
ENSPTIG00000012589	CNOT1	100	97.702	ENSCANG00000040534	CNOT1	100	97.702	Colobus_angolensis_palliatus
ENSPTIG00000012589	CNOT1	100	99.453	ENSCGRG00001016365	Cnot1	100	99.453	Cricetulus_griseus_chok1gshd
ENSPTIG00000012589	CNOT1	100	99.453	ENSCGRG00000001714	Cnot1	100	99.453	Cricetulus_griseus_crigri
ENSPTIG00000012589	CNOT1	100	83.153	ENSCVAG00000018930	cnot1	100	82.986	Cyprinodon_variegatus
ENSPTIG00000012589	CNOT1	100	89.899	ENSDARG00000004174	cnot1	100	89.858	Danio_rerio
ENSPTIG00000012589	CNOT1	100	97.308	ENSDNOG00000013250	CNOT1	100	97.308	Dasypus_novemcinctus
ENSPTIG00000012589	CNOT1	99	46.230	FBgn0085436	Not1	99	48.408	Drosophila_melanogaster
ENSPTIG00000012589	CNOT1	84	97.590	ENSETEG00000012806	CNOT1	84	97.590	Echinops_telfairi
ENSPTIG00000012589	CNOT1	81	76.831	ENSEBUG00000011534	cnot1	95	76.831	Eptatretus_burgeri
ENSPTIG00000012589	CNOT1	97	99.259	ENSEASG00005005819	CNOT1	100	98.802	Equus_asinus_asinus
ENSPTIG00000012589	CNOT1	100	99.916	ENSECAG00000009889	CNOT1	100	99.916	Equus_caballus
ENSPTIG00000012589	CNOT1	90	99.530	ENSEEUG00000006015	CNOT1	90	99.530	Erinaceus_europaeus
ENSPTIG00000012589	CNOT1	100	89.818	ENSELUG00000014085	cnot1	100	89.500	Esox_lucius
ENSPTIG00000012589	CNOT1	100	99.706	ENSFCAG00000025155	CNOT1	100	99.706	Felis_catus
ENSPTIG00000012589	CNOT1	100	97.811	ENSFALG00000007285	CNOT1	100	97.811	Ficedula_albicollis
ENSPTIG00000012589	CNOT1	100	99.705	ENSFDAG00000013399	CNOT1	100	99.705	Fukomys_damarensis
ENSPTIG00000012589	CNOT1	100	90.424	ENSFHEG00000020574	cnot1	100	90.382	Fundulus_heteroclitus
ENSPTIG00000012589	CNOT1	91	89.449	ENSGMOG00000012864	cnot1	100	89.820	Gadus_morhua
ENSPTIG00000012589	CNOT1	100	97.854	ENSGALG00000002301	CNOT1	100	97.854	Gallus_gallus
ENSPTIG00000012589	CNOT1	100	89.211	ENSGAFG00000015005	cnot1	100	89.211	Gambusia_affinis
ENSPTIG00000012589	CNOT1	91	90.241	ENSGACG00000002606	cnot1	100	95.752	Gasterosteus_aculeatus
ENSPTIG00000012589	CNOT1	100	97.939	ENSGAGG00000022646	CNOT1	100	97.939	Gopherus_agassizii
ENSPTIG00000012589	CNOT1	100	99.747	ENSGGOG00000009547	CNOT1	100	99.747	Gorilla_gorilla
ENSPTIG00000012589	CNOT1	97	97.055	ENSHBUG00000001729	cnot1	100	97.055	Haplochromis_burtoni
ENSPTIG00000012589	CNOT1	100	99.621	ENSHGLG00000014322	CNOT1	100	99.621	Heterocephalus_glaber_female
ENSPTIG00000012589	CNOT1	100	89.465	ENSHCOG00000006501	cnot1	100	89.603	Hippocampus_comes
ENSPTIG00000012589	CNOT1	100	88.926	ENSIPUG00000011915	cnot1	100	89.388	Ictalurus_punctatus
ENSPTIG00000012589	CNOT1	100	99.705	ENSSTOG00000005490	CNOT1	100	99.705	Ictidomys_tridecemlineatus
ENSPTIG00000012589	CNOT1	100	99.116	ENSJJAG00000000633	Cnot1	100	99.116	Jaculus_jaculus
ENSPTIG00000012589	CNOT1	100	90.297	ENSKMAG00000006149	cnot1	100	90.134	Kryptolebias_marmoratus
ENSPTIG00000012589	CNOT1	95	96.407	ENSLBEG00000004740	cnot1	100	96.407	Labrus_bergylta
ENSPTIG00000012589	CNOT1	100	95.076	ENSLACG00000010869	CNOT1	100	95.076	Latimeria_chalumnae
ENSPTIG00000012589	CNOT1	100	93.037	ENSLOCG00000006324	cnot1	100	93.037	Lepisosteus_oculatus
ENSPTIG00000012589	CNOT1	100	99.748	ENSLAFG00000000098	CNOT1	100	99.748	Loxodonta_africana
ENSPTIG00000012589	CNOT1	100	99.579	ENSMFAG00000035888	CNOT1	100	99.579	Macaca_fascicularis
ENSPTIG00000012589	CNOT1	100	99.790	ENSMMUG00000014625	CNOT1	100	99.790	Macaca_mulatta
ENSPTIG00000012589	CNOT1	100	97.021	ENSMNEG00000031820	CNOT1	100	99.860	Macaca_nemestrina
ENSPTIG00000012589	CNOT1	100	98.401	ENSMLEG00000040933	CNOT1	100	98.401	Mandrillus_leucophaeus
ENSPTIG00000012589	CNOT1	100	89.215	ENSMAMG00000016524	cnot1	100	89.253	Mastacembelus_armatus
ENSPTIG00000012589	CNOT1	97	97.055	ENSMZEG00005016210	cnot1	100	97.055	Maylandia_zebra
ENSPTIG00000012589	CNOT1	100	97.601	ENSMGAG00000001908	CNOT1	100	97.601	Meleagris_gallopavo
ENSPTIG00000012589	CNOT1	100	99.705	ENSMICG00000007071	CNOT1	100	99.705	Microcebus_murinus
ENSPTIG00000012589	CNOT1	100	99.579	ENSMOCG00000017969	Cnot1	100	99.579	Microtus_ochrogaster
ENSPTIG00000012589	CNOT1	97	93.689	ENSMMOG00000019134	cnot1	100	93.689	Mola_mola
ENSPTIG00000012589	CNOT1	100	98.023	ENSMODG00000014199	CNOT1	100	98.023	Monodelphis_domestica
ENSPTIG00000012589	CNOT1	100	90.298	ENSMALG00000008645	cnot1	100	90.298	Monopterus_albus
ENSPTIG00000012589	CNOT1	95	99.889	MGP_CAROLIEiJ_G0031430	Cnot1	92	99.889	Mus_caroli
ENSPTIG00000012589	CNOT1	100	99.537	ENSMUSG00000036550	Cnot1	100	99.537	Mus_musculus
ENSPTIG00000012589	CNOT1	100	99.495	MGP_PahariEiJ_G0023028	Cnot1	100	99.495	Mus_pahari
ENSPTIG00000012589	CNOT1	100	99.537	MGP_SPRETEiJ_G0032549	Cnot1	100	99.537	Mus_spretus
ENSPTIG00000012589	CNOT1	100	100.000	ENSMPUG00000004830	CNOT1	100	100.000	Mustela_putorius_furo
ENSPTIG00000012589	CNOT1	100	99.242	ENSMLUG00000003728	CNOT1	100	99.242	Myotis_lucifugus
ENSPTIG00000012589	CNOT1	100	99.747	ENSNGAG00000018628	Cnot1	100	99.747	Nannospalax_galili
ENSPTIG00000012589	CNOT1	94	97.055	ENSNBRG00000019358	cnot1	100	97.055	Neolamprologus_brichardi
ENSPTIG00000012589	CNOT1	100	99.705	ENSNLEG00000003566	CNOT1	100	99.705	Nomascus_leucogenys
ENSPTIG00000012589	CNOT1	86	98.658	ENSMEUG00000006145	CNOT1	87	98.658	Notamacropus_eugenii
ENSPTIG00000012589	CNOT1	86	100.000	ENSOPRG00000005604	CNOT1	86	100.000	Ochotona_princeps
ENSPTIG00000012589	CNOT1	100	99.663	ENSODEG00000016337	CNOT1	100	99.663	Octodon_degus
ENSPTIG00000012589	CNOT1	100	90.620	ENSONIG00000007358	cnot1	100	90.213	Oreochromis_niloticus
ENSPTIG00000012589	CNOT1	91	98.187	ENSOANG00000012109	CNOT1	100	98.496	Ornithorhynchus_anatinus
ENSPTIG00000012589	CNOT1	100	99.832	ENSOCUG00000006911	CNOT1	100	99.832	Oryctolagus_cuniculus
ENSPTIG00000012589	CNOT1	100	90.398	ENSORLG00000013734	cnot1	100	90.436	Oryzias_latipes
ENSPTIG00000012589	CNOT1	100	88.912	ENSORLG00020017012	cnot1	100	88.591	Oryzias_latipes_hni
ENSPTIG00000012589	CNOT1	100	88.828	ENSORLG00015007091	cnot1	100	88.339	Oryzias_latipes_hsok
ENSPTIG00000012589	CNOT1	100	88.166	ENSOMEG00000015124	cnot1	100	88.455	Oryzias_melastigma
ENSPTIG00000012589	CNOT1	100	99.747	ENSOGAG00000000543	CNOT1	100	99.747	Otolemur_garnettii
ENSPTIG00000012589	CNOT1	100	99.874	ENSOARG00000001567	CNOT1	100	99.874	Ovis_aries
ENSPTIG00000012589	CNOT1	100	99.790	ENSPPAG00000022013	CNOT1	100	99.790	Pan_paniscus
ENSPTIG00000012589	CNOT1	100	100.000	ENSPPRG00000004867	CNOT1	100	100.000	Panthera_pardus
ENSPTIG00000012589	CNOT1	100	99.496	ENSPTRG00000008183	CNOT1	100	99.496	Pan_troglodytes
ENSPTIG00000012589	CNOT1	100	96.270	ENSPANG00000020901	CNOT1	100	96.270	Papio_anubis
ENSPTIG00000012589	CNOT1	100	92.153	ENSPKIG00000023538	CNOT1	100	92.321	Paramormyrops_kingsleyae
ENSPTIG00000012589	CNOT1	97	93.258	ENSPKIG00000002914	CNOT1	99	93.258	Paramormyrops_kingsleyae
ENSPTIG00000012589	CNOT1	100	97.811	ENSPSIG00000005499	CNOT1	100	97.811	Pelodiscus_sinensis
ENSPTIG00000012589	CNOT1	100	81.166	ENSPMAG00000009381	cnot1	100	81.066	Petromyzon_marinus
ENSPTIG00000012589	CNOT1	100	96.913	ENSPCIG00000007343	CNOT1	100	98.611	Phascolarctos_cinereus
ENSPTIG00000012589	CNOT1	99	89.810	ENSPFOG00000003497	cnot1	100	89.894	Poecilia_formosa
ENSPTIG00000012589	CNOT1	95	96.008	ENSPLAG00000014018	cnot1	100	96.008	Poecilia_latipinna
ENSPTIG00000012589	CNOT1	95	96.008	ENSPMEG00000005868	cnot1	100	96.008	Poecilia_mexicana
ENSPTIG00000012589	CNOT1	95	96.008	ENSPREG00000018793	cnot1	100	96.008	Poecilia_reticulata
ENSPTIG00000012589	CNOT1	100	99.747	ENSPPYG00000007410	CNOT1	100	99.747	Pongo_abelii
ENSPTIG00000012589	CNOT1	90	97.871	ENSPCAG00000003241	CNOT1	90	97.871	Procavia_capensis
ENSPTIG00000012589	CNOT1	100	99.454	ENSPCOG00000027139	CNOT1	100	99.454	Propithecus_coquereli
ENSPTIG00000012589	CNOT1	100	97.264	ENSPVAG00000004243	CNOT1	100	97.264	Pteropus_vampyrus
ENSPTIG00000012589	CNOT1	97	97.055	ENSPNYG00000012919	cnot1	100	97.055	Pundamilia_nyererei
ENSPTIG00000012589	CNOT1	100	89.945	ENSPNAG00000000246	cnot1	100	90.366	Pygocentrus_nattereri
ENSPTIG00000012589	CNOT1	100	99.453	ENSRNOG00000012271	Cnot1	100	99.453	Rattus_norvegicus
ENSPTIG00000012589	CNOT1	100	97.482	ENSRBIG00000044598	CNOT1	100	97.482	Rhinopithecus_bieti
ENSPTIG00000012589	CNOT1	100	99.832	ENSRROG00000000906	CNOT1	100	99.832	Rhinopithecus_roxellana
ENSPTIG00000012589	CNOT1	56	31.373	YCR093W	CDC39	68	34.074	Saccharomyces_cerevisiae
ENSPTIG00000012589	CNOT1	100	95.354	ENSSBOG00000029155	CNOT1	100	95.354	Saimiri_boliviensis_boliviensis
ENSPTIG00000012589	CNOT1	100	98.192	ENSSHAG00000012187	CNOT1	100	98.192	Sarcophilus_harrisii
ENSPTIG00000012589	CNOT1	100	90.650	ENSSFOG00015017614	cnot1	100	90.394	Scleropages_formosus
ENSPTIG00000012589	CNOT1	97	97.055	ENSSMAG00000013844	cnot1	100	97.055	Scophthalmus_maximus
ENSPTIG00000012589	CNOT1	97	96.914	ENSSDUG00000021491	cnot1	100	96.914	Seriola_dumerili
ENSPTIG00000012589	CNOT1	97	96.914	ENSSLDG00000014816	cnot1	100	96.914	Seriola_lalandi_dorsalis
ENSPTIG00000012589	CNOT1	84	100.000	ENSSARG00000000762	CNOT1	88	100.000	Sorex_araneus
ENSPTIG00000012589	CNOT1	100	90.684	ENSSPAG00000018802	cnot1	100	90.432	Stegastes_partitus
ENSPTIG00000012589	CNOT1	100	99.747	ENSSSCG00000002799	CNOT1	100	99.747	Sus_scrofa
ENSPTIG00000012589	CNOT1	100	97.688	ENSTGUG00000005919	CNOT1	100	97.688	Taeniopygia_guttata
ENSPTIG00000012589	CNOT1	100	89.028	ENSTNIG00000018706	cnot1	100	88.875	Tetraodon_nigroviridis
ENSPTIG00000012589	CNOT1	80	100.000	ENSTBEG00000000720	CNOT1	80	100.000	Tupaia_belangeri
ENSPTIG00000012589	CNOT1	95	99.592	ENSTTRG00000008460	CNOT1	95	99.592	Tursiops_truncatus
ENSPTIG00000012589	CNOT1	100	100.000	ENSUAMG00000009251	CNOT1	100	100.000	Ursus_americanus
ENSPTIG00000012589	CNOT1	100	100.000	ENSUMAG00000021291	CNOT1	100	100.000	Ursus_maritimus
ENSPTIG00000012589	CNOT1	97	97.462	ENSVPAG00000008846	CNOT1	97	97.462	Vicugna_pacos
ENSPTIG00000012589	CNOT1	100	98.784	ENSVVUG00000024037	CNOT1	100	99.487	Vulpes_vulpes
ENSPTIG00000012589	CNOT1	100	90.302	ENSXETG00000015900	cnot1	100	90.092	Xenopus_tropicalis
ENSPTIG00000012589	CNOT1	100	89.379	ENSXCOG00000013552	cnot1	100	89.379	Xiphophorus_couchianus
ENSPTIG00000012589	CNOT1	100	89.421	ENSXMAG00000006031	cnot1	100	89.421	Xiphophorus_maculatus