EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012670 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 54315 bases
Position: chrKE721769.1:20912-75226
Accession: 102965968
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012670	ResIII	PF04851.15	9.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016702	-	3395	XM_007082771	ENSPTIP00000012670	726 (aa)	XP_007082833	-

Gene Model

Click here to download ENSPTIG00000012670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012670	-	91	43.852	ENSPTIG00000012200	RAD54L	85	43.852
ENSPTIG00000012670	-	74	30.731	ENSPTIG00000009148	ERCC6L2	82	30.731
ENSPTIG00000012670	-	65	35.437	ENSPTIG00000007647	HELLS	64	35.437

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012670	-	99	90.746	ENSG00000197275	RAD54B	80	90.746	Homo_sapiens
ENSPTIG00000012670	-	99	90.746	ENSG00000265817	FSBP	99	90.746	Homo_sapiens
ENSPTIG00000012670	-	100	95.317	ENSAMEG00000005834	-	80	95.317	Ailuropoda_melanoleuca
ENSPTIG00000012670	-	99	58.880	ENSACIG00000013005	rad54b	82	58.880	Amphilophus_citrinellus
ENSPTIG00000012670	-	99	59.809	ENSAOCG00000008523	rad54b	79	59.809	Amphiprion_ocellaris
ENSPTIG00000012670	-	99	59.072	ENSAPEG00000001673	rad54b	82	59.209	Amphiprion_percula
ENSPTIG00000012670	-	99	58.663	ENSATEG00000001527	rad54b	83	58.663	Anabas_testudineus
ENSPTIG00000012670	-	99	74.931	ENSAPLG00000014366	-	79	74.931	Anas_platyrhynchos
ENSPTIG00000012670	-	99	71.231	ENSACAG00000003671	-	90	71.231	Anolis_carolinensis
ENSPTIG00000012670	-	89	88.117	ENSANAG00000019528	-	99	88.117	Aotus_nancymaae
ENSPTIG00000012670	-	99	59.290	ENSACLG00000007826	rad54b	84	59.290	Astatotilapia_calliptera
ENSPTIG00000012670	-	99	57.830	ENSAMXG00000039985	rad54b	87	57.687	Astyanax_mexicanus
ENSPTIG00000012670	-	100	90.496	ENSBTAG00000000632	RAD54B	80	90.496	Bos_taurus
ENSPTIG00000012670	-	75	38.989	WBGene00013792	Y116A8C.13	88	35.746	Caenorhabditis_elegans
ENSPTIG00000012670	-	99	88.966	ENSCJAG00000000080	-	99	88.966	Callithrix_jacchus
ENSPTIG00000012670	-	100	92.837	ENSCAFG00000009179	RAD54B	80	92.837	Canis_familiaris
ENSPTIG00000012670	-	100	92.975	ENSCAFG00020012084	-	80	92.975	Canis_lupus_dingo
ENSPTIG00000012670	-	100	90.220	ENSCHIG00000008230	-	80	90.220	Capra_hircus
ENSPTIG00000012670	-	100	88.705	ENSTSYG00000013234	-	80	88.705	Carlito_syrichta
ENSPTIG00000012670	-	100	86.639	ENSCPOG00000011643	-	81	86.639	Cavia_porcellus
ENSPTIG00000012670	-	99	88.690	ENSCCAG00000011754	-	99	88.690	Cebus_capucinus
ENSPTIG00000012670	-	99	90.193	ENSCATG00000030661	-	99	90.193	Cercocebus_atys
ENSPTIG00000012670	-	99	87.707	ENSCLAG00000010476	-	82	87.707	Chinchilla_lanigera
ENSPTIG00000012670	-	99	89.917	ENSCSAG00000012712	-	80	89.917	Chlorocebus_sabaeus
ENSPTIG00000012670	-	99	75.344	ENSCPBG00000003204	-	79	75.344	Chrysemys_picta_bellii
ENSPTIG00000012670	-	99	90.331	ENSCANG00000017939	-	99	90.331	Colobus_angolensis_palliatus
ENSPTIG00000012670	-	100	82.944	ENSCGRG00001020184	Rad54b	82	82.944	Cricetulus_griseus_chok1gshd
ENSPTIG00000012670	-	100	81.568	ENSCGRG00000016752	Rad54b	82	81.568	Cricetulus_griseus_crigri
ENSPTIG00000012670	-	99	58.095	ENSCSEG00000001601	rad54b	85	58.095	Cynoglossus_semilaevis
ENSPTIG00000012670	-	99	61.202	ENSCVAG00000009200	rad54b	82	61.202	Cyprinodon_variegatus
ENSPTIG00000012670	-	100	57.959	ENSDARG00000092134	rad54b	100	60.829	Danio_rerio
ENSPTIG00000012670	-	99	87.603	ENSDNOG00000015535	-	79	87.603	Dasypus_novemcinctus
ENSPTIG00000012670	-	99	87.724	ENSDORG00000002492	Rad54b	83	87.724	Dipodomys_ordii
ENSPTIG00000012670	-	83	87.086	ENSETEG00000010605	-	77	87.086	Echinops_telfairi
ENSPTIG00000012670	-	99	50.612	ENSEBUG00000009104	rad54b	77	50.612	Eptatretus_burgeri
ENSPTIG00000012670	-	100	90.909	ENSEASG00005004021	-	82	90.909	Equus_asinus_asinus
ENSPTIG00000012670	-	100	91.185	ENSECAG00000021949	-	85	91.185	Equus_caballus
ENSPTIG00000012670	-	88	85.093	ENSEEUG00000008056	-	70	85.093	Erinaceus_europaeus
ENSPTIG00000012670	-	99	58.436	ENSELUG00000009287	rad54b	77	58.436	Esox_lucius
ENSPTIG00000012670	-	100	99.036	ENSFCAG00000015513	-	100	99.036	Felis_catus
ENSPTIG00000012670	-	99	74.105	ENSFALG00000005467	-	79	74.105	Ficedula_albicollis
ENSPTIG00000012670	-	98	87.712	ENSFDAG00000020541	-	80	87.293	Fukomys_damarensis
ENSPTIG00000012670	-	99	57.609	ENSFHEG00000014382	rad54b	80	57.745	Fundulus_heteroclitus
ENSPTIG00000012670	-	99	56.233	ENSGMOG00000014774	rad54b	91	56.233	Gadus_morhua
ENSPTIG00000012670	-	99	73.691	ENSGALG00000043597	RAD54B	79	73.691	Gallus_gallus
ENSPTIG00000012670	-	99	59.647	ENSGAFG00000007901	rad54b	85	59.482	Gambusia_affinis
ENSPTIG00000012670	-	99	59.511	ENSGACG00000009128	rad54b	79	59.511	Gasterosteus_aculeatus
ENSPTIG00000012670	-	99	75.104	ENSGAGG00000018747	-	79	75.104	Gopherus_agassizii
ENSPTIG00000012670	-	100	90.496	ENSGGOG00000023516	-	80	90.496	Gorilla_gorilla
ENSPTIG00000012670	-	99	59.345	ENSHBUG00000016017	rad54b	78	59.345	Haplochromis_burtoni
ENSPTIG00000012670	-	100	86.202	ENSHGLG00000008263	RAD54B	79	86.202	Heterocephalus_glaber_female
ENSPTIG00000012670	-	100	85.095	ENSHGLG00100008108	-	80	85.095	Heterocephalus_glaber_male
ENSPTIG00000012670	-	99	58.207	ENSHCOG00000004764	rad54b	90	56.192	Hippocampus_comes
ENSPTIG00000012670	-	100	57.895	ENSIPUG00000018531	rad54b	77	57.895	Ictalurus_punctatus
ENSPTIG00000012670	-	99	88.333	ENSSTOG00000010791	-	79	88.333	Ictidomys_tridecemlineatus
ENSPTIG00000012670	-	100	85.537	ENSJJAG00000010314	Rad54b	80	85.537	Jaculus_jaculus
ENSPTIG00000012670	-	99	58.356	ENSKMAG00000004744	rad54b	84	58.356	Kryptolebias_marmoratus
ENSPTIG00000012670	-	99	69.103	ENSLACG00000000859	-	97	69.103	Latimeria_chalumnae
ENSPTIG00000012670	-	99	64.325	ENSLOCG00000010100	rad54b	86	63.847	Lepisosteus_oculatus
ENSPTIG00000012670	-	100	88.567	ENSLAFG00000015315	-	90	88.567	Loxodonta_africana
ENSPTIG00000012670	-	99	89.917	ENSMFAG00000031629	-	99	89.917	Macaca_fascicularis
ENSPTIG00000012670	-	99	89.917	ENSMMUG00000005659	-	80	89.917	Macaca_mulatta
ENSPTIG00000012670	-	99	89.917	ENSMNEG00000016408	-	80	89.917	Macaca_nemestrina
ENSPTIG00000012670	-	99	90.331	ENSMLEG00000006946	-	80	90.331	Mandrillus_leucophaeus
ENSPTIG00000012670	-	99	59.704	ENSMAMG00000012269	rad54b	82	59.704	Mastacembelus_armatus
ENSPTIG00000012670	-	99	59.426	ENSMZEG00005005281	rad54b	87	59.426	Maylandia_zebra
ENSPTIG00000012670	-	99	73.967	ENSMGAG00000012024	-	79	73.967	Meleagris_gallopavo
ENSPTIG00000012670	-	100	82.806	ENSMAUG00000013586	Rad54b	82	82.806	Mesocricetus_auratus
ENSPTIG00000012670	-	99	90.069	ENSMICG00000000754	-	83	90.069	Microcebus_murinus
ENSPTIG00000012670	-	100	81.319	ENSMOCG00000020035	Rad54b	81	81.319	Microtus_ochrogaster
ENSPTIG00000012670	-	99	57.781	ENSMMOG00000003394	rad54b	82	57.781	Mola_mola
ENSPTIG00000012670	-	99	79.448	ENSMODG00000007343	-	90	79.448	Monodelphis_domestica
ENSPTIG00000012670	-	89	59.535	ENSMALG00000001520	rad54b	99	59.535	Monopterus_albus
ENSPTIG00000012670	-	100	83.081	MGP_CAROLIEiJ_G0025810	Rad54b	81	83.081	Mus_caroli
ENSPTIG00000012670	-	100	82.920	ENSMUSG00000078773	Rad54b	81	82.920	Mus_musculus
ENSPTIG00000012670	-	100	83.333	MGP_PahariEiJ_G0023933	Rad54b	82	83.333	Mus_pahari
ENSPTIG00000012670	-	100	83.884	MGP_SPRETEiJ_G0026758	Rad54b	81	83.884	Mus_spretus
ENSPTIG00000012670	-	100	93.251	ENSMPUG00000008878	-	90	93.251	Mustela_putorius_furo
ENSPTIG00000012670	-	99	90.483	ENSMLUG00000008953	-	79	90.483	Myotis_lucifugus
ENSPTIG00000012670	-	100	86.339	ENSNGAG00000017537	Rad54b	81	86.339	Nannospalax_galili
ENSPTIG00000012670	-	99	59.508	ENSNBRG00000013394	rad54b	84	59.644	Neolamprologus_brichardi
ENSPTIG00000012670	-	99	90.608	ENSNLEG00000003062	-	99	90.608	Nomascus_leucogenys
ENSPTIG00000012670	-	78	78.261	ENSMEUG00000012426	-	62	78.261	Notamacropus_eugenii
ENSPTIG00000012670	-	100	86.226	ENSODEG00000019564	-	80	86.226	Octodon_degus
ENSPTIG00000012670	-	94	87.353	ENSODEG00000002650	-	91	87.353	Octodon_degus
ENSPTIG00000012670	-	99	59.781	ENSONIG00000006067	rad54b	80	59.781	Oreochromis_niloticus
ENSPTIG00000012670	-	100	77.166	ENSOANG00000011348	-	97	77.166	Ornithorhynchus_anatinus
ENSPTIG00000012670	-	100	88.017	ENSOCUG00000016478	-	80	88.017	Oryctolagus_cuniculus
ENSPTIG00000012670	-	99	60.816	ENSORLG00000008918	rad54b	99	62.906	Oryzias_latipes
ENSPTIG00000012670	-	89	63.060	ENSORLG00020012171	rad54b	99	63.060	Oryzias_latipes_hni
ENSPTIG00000012670	-	99	60.405	ENSORLG00015018536	rad54b	78	60.405	Oryzias_latipes_hsok
ENSPTIG00000012670	-	99	60.000	ENSOMEG00000004345	rad54b	94	60.000	Oryzias_melastigma
ENSPTIG00000012670	-	99	88.828	ENSOGAG00000007854	-	80	88.828	Otolemur_garnettii
ENSPTIG00000012670	-	100	89.532	ENSOARG00000007691	-	89	89.532	Ovis_aries
ENSPTIG00000012670	-	99	88.812	ENSPPAG00000029572	-	79	88.812	Pan_paniscus
ENSPTIG00000012670	-	100	99.449	ENSPPRG00000007571	-	100	99.449	Panthera_pardus
ENSPTIG00000012670	-	99	90.608	ENSPTRG00000020427	-	99	90.608	Pan_troglodytes
ENSPTIG00000012670	-	99	90.331	ENSPANG00000019566	-	80	90.331	Papio_anubis
ENSPTIG00000012670	-	99	63.260	ENSPKIG00000014974	rad54b	78	63.260	Paramormyrops_kingsleyae
ENSPTIG00000012670	-	99	73.003	ENSPSIG00000002383	-	88	73.003	Pelodiscus_sinensis
ENSPTIG00000012670	-	100	83.356	ENSPEMG00000012133	Rad54b	81	83.356	Peromyscus_maniculatus_bairdii
ENSPTIG00000012670	-	99	57.823	ENSPMAG00000002916	rad54b	91	58.095	Petromyzon_marinus
ENSPTIG00000012670	-	99	80.414	ENSPCIG00000020151	-	85	79.724	Phascolarctos_cinereus
ENSPTIG00000012670	-	99	60.462	ENSPFOG00000023411	rad54b	78	60.462	Poecilia_formosa
ENSPTIG00000012670	-	99	60.734	ENSPLAG00000010430	rad54b	78	60.734	Poecilia_latipinna
ENSPTIG00000012670	-	99	60.326	ENSPMEG00000016873	rad54b	85	59.973	Poecilia_mexicana
ENSPTIG00000012670	-	99	60.164	ENSPREG00000018443	rad54b	83	60.164	Poecilia_reticulata
ENSPTIG00000012670	-	99	90.331	ENSPPYG00000018750	-	80	90.331	Pongo_abelii
ENSPTIG00000012670	-	99	90.207	ENSPCOG00000026845	-	99	90.207	Propithecus_coquereli
ENSPTIG00000012670	-	99	90.483	ENSPVAG00000000261	-	84	90.483	Pteropus_vampyrus
ENSPTIG00000012670	-	99	59.724	ENSPNYG00000018303	rad54b	88	59.724	Pundamilia_nyererei
ENSPTIG00000012670	-	99	59.048	ENSPNAG00000000295	rad54b	85	58.390	Pygocentrus_nattereri
ENSPTIG00000012670	-	100	80.880	ENSRNOG00000039949	Rad54b	82	80.880	Rattus_norvegicus
ENSPTIG00000012670	-	99	89.503	ENSRBIG00000020419	-	80	89.503	Rhinopithecus_bieti
ENSPTIG00000012670	-	99	89.503	ENSRROG00000039897	-	80	89.503	Rhinopithecus_roxellana
ENSPTIG00000012670	-	77	42.669	YBR073W	RDH54	61	42.669	Saccharomyces_cerevisiae
ENSPTIG00000012670	-	99	88.414	ENSSBOG00000028501	-	80	88.414	Saimiri_boliviensis_boliviensis
ENSPTIG00000012670	-	99	80.498	ENSSHAG00000017038	-	79	80.498	Sarcophilus_harrisii
ENSPTIG00000012670	-	81	65.306	ENSSFOG00015008483	rad54b	91	65.306	Scleropages_formosus
ENSPTIG00000012670	-	99	58.333	ENSSMAG00000018659	rad54b	83	58.333	Scophthalmus_maximus
ENSPTIG00000012670	-	98	59.697	ENSSDUG00000001122	rad54b	75	59.697	Seriola_dumerili
ENSPTIG00000012670	-	99	59.294	ENSSLDG00000013787	rad54b	84	54.953	Seriola_lalandi_dorsalis
ENSPTIG00000012670	-	99	73.278	ENSSPUG00000016497	-	82	73.278	Sphenodon_punctatus
ENSPTIG00000012670	-	99	59.264	ENSSPAG00000012800	rad54b	83	59.264	Stegastes_partitus
ENSPTIG00000012670	-	99	89.807	ENSSSCG00000006101	-	90	89.807	Sus_scrofa
ENSPTIG00000012670	-	99	73.901	ENSTGUG00000011880	-	79	73.901	Taeniopygia_guttata
ENSPTIG00000012670	-	99	59.203	ENSTRUG00000010015	rad54b	76	59.203	Takifugu_rubripes
ENSPTIG00000012670	-	99	85.931	ENSTTRG00000006312	-	80	85.931	Tursiops_truncatus
ENSPTIG00000012670	-	100	95.041	ENSUMAG00000016401	-	80	95.041	Ursus_maritimus
ENSPTIG00000012670	-	100	90.083	ENSVPAG00000003157	-	80	90.083	Vicugna_pacos
ENSPTIG00000012670	-	99	59.259	ENSXETG00000025924	rad54b	90	59.259	Xenopus_tropicalis
ENSPTIG00000012670	-	99	59.345	ENSXMAG00000013141	rad54b	84	59.345	Xiphophorus_maculatus