EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000012676 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 7934 bases
Position: chrKE721569.1:3824783-3832716
Accession: 33632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012682	zf-CCCH	PF00642.24	1.3e-15	1	2
ENSPTIP00000012682	zf-CCCH	PF00642.24	1.3e-15	2	2
ENSPTIP00000012692	zf-CCCH	PF00642.24	3.7e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016714	CPSF4L-201	462	-	ENSPTIP00000012682	153 (aa)	-	-
ENSPTIT00000016723	CPSF4L-202	492	-	ENSPTIP00000012692	163 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000012676's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012676's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000012676	CPSF4L	83	61.486	ENSPTIG00000005604	CPSF4	55	61.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012676	CPSF4L	96	75.148	ENSG00000187959	CPSF4L	94	75.148	Homo_sapiens
ENSPTIG00000012676	CPSF4L	99	49.342	ENSANAG00000026558	-	97	49.342	Aotus_nancymaae
ENSPTIG00000012676	CPSF4L	76	70.690	ENSCJAG00000019911	CPSF4L	81	70.690	Callithrix_jacchus
ENSPTIG00000012676	CPSF4L	52	46.250	ENSCCAG00000030566	CPSF4L	62	46.250	Cebus_capucinus
ENSPTIG00000012676	CPSF4L	84	88.321	ENSCATG00000044555	CPSF4L	90	80.328	Cercocebus_atys
ENSPTIG00000012676	CPSF4L	89	83.448	ENSCSAG00000004429	CPSF4L	81	83.448	Chlorocebus_sabaeus
ENSPTIG00000012676	CPSF4L	84	88.321	ENSCANG00000035042	CPSF4L	99	67.901	Colobus_angolensis_palliatus
ENSPTIG00000012676	CPSF4L	82	79.104	ENSCGRG00001020079	Cpsf4l	74	79.104	Cricetulus_griseus_chok1gshd
ENSPTIG00000012676	CPSF4L	82	79.104	ENSCGRG00000010419	Cpsf4l	74	79.104	Cricetulus_griseus_crigri
ENSPTIG00000012676	CPSF4L	83	85.926	ENSDNOG00000014458	CPSF4L	82	86.408	Dasypus_novemcinctus
ENSPTIG00000012676	CPSF4L	84	91.241	ENSEASG00005018763	CPSF4L	83	91.241	Equus_asinus_asinus
ENSPTIG00000012676	CPSF4L	84	91.241	ENSECAG00000024813	CPSF4L	83	91.241	Equus_caballus
ENSPTIG00000012676	CPSF4L	84	98.540	ENSFCAG00000004745	CPSF4L	54	98.540	Felis_catus
ENSPTIG00000012676	CPSF4L	84	89.051	ENSGGOG00000026659	CPSF4L	97	72.078	Gorilla_gorilla
ENSPTIG00000012676	CPSF4L	83	82.222	ENSSTOG00000001849	CPSF4L	78	82.222	Ictidomys_tridecemlineatus
ENSPTIG00000012676	CPSF4L	83	82.222	ENSLAFG00000010697	CPSF4L	77	82.222	Loxodonta_africana
ENSPTIG00000012676	CPSF4L	84	88.321	ENSMFAG00000037840	CPSF4L	77	88.321	Macaca_fascicularis
ENSPTIG00000012676	CPSF4L	84	88.321	ENSMMUG00000001271	CPSF4L	77	88.321	Macaca_mulatta
ENSPTIG00000012676	CPSF4L	84	88.321	ENSMNEG00000045419	CPSF4L	77	88.321	Macaca_nemestrina
ENSPTIG00000012676	CPSF4L	84	88.321	ENSMLEG00000038527	CPSF4L	77	88.321	Mandrillus_leucophaeus
ENSPTIG00000012676	CPSF4L	84	80.292	ENSMAUG00000019519	-	83	80.292	Mesocricetus_auratus
ENSPTIG00000012676	CPSF4L	84	89.051	ENSMICG00000007503	CPSF4L	79	89.051	Microcebus_murinus
ENSPTIG00000012676	CPSF4L	83	80.147	ENSMOCG00000015313	-	94	80.147	Microtus_ochrogaster
ENSPTIG00000012676	CPSF4L	80	76.336	ENSMODG00000025672	CPSF4L	81	76.336	Monodelphis_domestica
ENSPTIG00000012676	CPSF4L	82	77.612	MGP_CAROLIEiJ_G0017369	-	67	70.874	Mus_caroli
ENSPTIG00000012676	CPSF4L	82	76.866	ENSMUSG00000018727	Cpsf4l	67	71.845	Mus_musculus
ENSPTIG00000012676	CPSF4L	67	75.728	MGP_PahariEiJ_G0018499	-	67	75.728	Mus_pahari
ENSPTIG00000012676	CPSF4L	67	71.845	MGP_SPRETEiJ_G0018215	-	67	71.845	Mus_spretus
ENSPTIG00000012676	CPSF4L	83	91.111	ENSMPUG00000014276	CPSF4L	81	91.111	Mustela_putorius_furo
ENSPTIG00000012676	CPSF4L	84	76.642	ENSMLUG00000009617	CPSF4L	77	76.642	Myotis_lucifugus
ENSPTIG00000012676	CPSF4L	84	83.942	ENSNGAG00000009325	-	80	83.942	Nannospalax_galili
ENSPTIG00000012676	CPSF4L	100	72.727	ENSNLEG00000001420	CPSF4L	94	75.740	Nomascus_leucogenys
ENSPTIG00000012676	CPSF4L	66	76.238	ENSMEUG00000004051	-	99	76.238	Notamacropus_eugenii
ENSPTIG00000012676	CPSF4L	93	66.901	ENSOPRG00000007484	-	93	66.901	Ochotona_princeps
ENSPTIG00000012676	CPSF4L	84	80.292	ENSOCUG00000026495	CPSF4L	61	80.292	Oryctolagus_cuniculus
ENSPTIG00000012676	CPSF4L	100	71.429	ENSPPAG00000037000	-	97	71.429	Pan_paniscus
ENSPTIG00000012676	CPSF4L	100	100.000	ENSPPRG00000001058	CPSF4L	100	100.000	Panthera_pardus
ENSPTIG00000012676	CPSF4L	100	71.429	ENSPTRG00000009598	CPSF4L	94	75.148	Pan_troglodytes
ENSPTIG00000012676	CPSF4L	84	88.321	ENSPANG00000020331	CPSF4L	97	70.779	Papio_anubis
ENSPTIG00000012676	CPSF4L	84	81.022	ENSPEMG00000011680	Cpsf4l	67	75.728	Peromyscus_maniculatus_bairdii
ENSPTIG00000012676	CPSF4L	93	66.463	ENSPCIG00000001889	CPSF4L	96	66.463	Phascolarctos_cinereus
ENSPTIG00000012676	CPSF4L	100	71.429	ENSPPYG00000008589	-	97	71.429	Pongo_abelii
ENSPTIG00000012676	CPSF4L	84	88.321	ENSPCOG00000021801	CPSF4L	78	88.321	Propithecus_coquereli
ENSPTIG00000012676	CPSF4L	100	69.872	ENSPVAG00000006736	CPSF4L	99	69.872	Pteropus_vampyrus
ENSPTIG00000012676	CPSF4L	84	86.861	ENSRBIG00000029048	CPSF4L	99	68.519	Rhinopithecus_bieti
ENSPTIG00000012676	CPSF4L	82	88.060	ENSRROG00000037051	CPSF4L	75	88.060	Rhinopithecus_roxellana
ENSPTIG00000012676	CPSF4L	53	82.759	ENSTBEG00000012716	-	97	82.759	Tupaia_belangeri
ENSPTIG00000012676	CPSF4L	100	76.623	ENSTTRG00000005243	CPSF4L	98	76.623	Tursiops_truncatus
ENSPTIG00000012676	CPSF4L	91	85.714	ENSUAMG00000007728	CPSF4L	98	85.714	Ursus_americanus
ENSPTIG00000012676	CPSF4L	83	94.118	ENSUMAG00000007869	CPSF4L	87	94.118	Ursus_maritimus