EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000012816 (Gene tree)
Gene ID: 102960304
Gene Symbol: RTCA
Alias: -
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 23605 bases
Position: chrKE722055.1:3825862-3849466
Accession: 102960304
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000012910	RTC	PF01137.21	1.4e-87	1	1
ENSPTIP00000012922	RTC	PF01137.21	5.5e-82	1	1
ENSPTIP00000012922	RTC_insert	PF05189.13	3.9e-25	1	1
ENSPTIP00000012910	RTC_insert	PF05189.13	4.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000016964	RTCA-202	1137	-	ENSPTIP00000012922	378 (aa)	-	-
ENSPTIT00000016952	RTCA-201	1598	XM_007093632	ENSPTIP00000012910	366 (aa)	XP_007093694	UPI00042BE0FE

Gene Model

Click here to download ENSPTIG00000012816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000012816's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000012816	RTCA	100	94.809	ENSG00000137996	RTCA	100	95.918	Homo_sapiens
ENSPTIG00000012816	RTCA	99	72.299	ENSAPOG00000001345	rtca	98	72.299	Acanthochromis_polyacanthus
ENSPTIG00000012816	RTCA	73	97.398	ENSAMEG00000008855	RTCA	100	97.398	Ailuropoda_melanoleuca
ENSPTIG00000012816	RTCA	99	71.823	ENSACIG00000019643	rtca	99	71.823	Amphilophus_citrinellus
ENSPTIG00000012816	RTCA	100	71.585	ENSAOCG00000014979	rtca	99	71.585	Amphiprion_ocellaris
ENSPTIG00000012816	RTCA	100	71.585	ENSAPEG00000006945	rtca	99	71.585	Amphiprion_percula
ENSPTIG00000012816	RTCA	100	69.672	ENSATEG00000006315	rtca	100	69.672	Anabas_testudineus
ENSPTIG00000012816	RTCA	96	79.944	ENSAPLG00000015430	RTCA	100	79.944	Anas_platyrhynchos
ENSPTIG00000012816	RTCA	100	94.262	ENSANAG00000025446	RTCA	100	94.262	Aotus_nancymaae
ENSPTIG00000012816	RTCA	100	70.300	ENSACLG00000020770	rtca	99	70.300	Astatotilapia_calliptera
ENSPTIG00000012816	RTCA	100	72.951	ENSAMXG00000043271	rtca	100	72.951	Astyanax_mexicanus
ENSPTIG00000012816	RTCA	100	96.721	ENSBTAG00000006321	RTCA	100	96.721	Bos_taurus
ENSPTIG00000012816	RTCA	100	94.262	ENSCJAG00000003398	RTCA	100	94.262	Callithrix_jacchus
ENSPTIG00000012816	RTCA	100	98.361	ENSCAFG00000020010	RTCA	68	98.361	Canis_familiaris
ENSPTIG00000012816	RTCA	100	98.361	ENSCAFG00020011528	RTCA	57	98.361	Canis_lupus_dingo
ENSPTIG00000012816	RTCA	100	96.448	ENSCHIG00000018937	RTCA	100	96.448	Capra_hircus
ENSPTIG00000012816	RTCA	100	94.536	ENSTSYG00000011305	RTCA	100	94.536	Carlito_syrichta
ENSPTIG00000012816	RTCA	100	93.989	ENSCCAG00000021844	RTCA	100	93.989	Cebus_capucinus
ENSPTIG00000012816	RTCA	100	91.906	ENSCATG00000019364	RTCA	100	94.822	Cercocebus_atys
ENSPTIG00000012816	RTCA	87	94.637	ENSCLAG00000006125	RTCA	100	94.637	Chinchilla_lanigera
ENSPTIG00000012816	RTCA	100	95.082	ENSCSAG00000001509	RTCA	100	95.082	Chlorocebus_sabaeus
ENSPTIG00000012816	RTCA	99	94.780	ENSCHOG00000005211	RTCA	99	94.780	Choloepus_hoffmanni
ENSPTIG00000012816	RTCA	100	83.880	ENSCPBG00000026658	RTCA	100	83.880	Chrysemys_picta_bellii
ENSPTIG00000012816	RTCA	98	55.833	ENSCING00000007875	-	98	55.833	Ciona_intestinalis
ENSPTIG00000012816	RTCA	98	54.444	ENSCSAVG00000007269	-	98	54.444	Ciona_savignyi
ENSPTIG00000012816	RTCA	100	94.809	ENSCANG00000040106	RTCA	100	94.809	Colobus_angolensis_palliatus
ENSPTIG00000012816	RTCA	73	91.822	ENSCGRG00001013163	Rtca	85	91.822	Cricetulus_griseus_chok1gshd
ENSPTIG00000012816	RTCA	98	69.444	ENSCSEG00000000530	rtca	96	69.444	Cynoglossus_semilaevis
ENSPTIG00000012816	RTCA	100	59.563	ENSCVAG00000021809	rtca	100	59.563	Cyprinodon_variegatus
ENSPTIG00000012816	RTCA	100	73.497	ENSDARG00000002215	rtca	100	73.497	Danio_rerio
ENSPTIG00000012816	RTCA	99	95.330	ENSDNOG00000000456	RTCA	99	95.330	Dasypus_novemcinctus
ENSPTIG00000012816	RTCA	100	93.716	ENSDORG00000005448	Rtca	100	93.716	Dipodomys_ordii
ENSPTIG00000012816	RTCA	99	38.398	FBgn0025630	Rtca	99	38.398	Drosophila_melanogaster
ENSPTIG00000012816	RTCA	95	54.802	ENSEBUG00000008556	rtca	97	54.802	Eptatretus_burgeri
ENSPTIG00000012816	RTCA	100	95.902	ENSEASG00005015926	RTCA	100	95.902	Equus_asinus_asinus
ENSPTIG00000012816	RTCA	100	95.902	ENSECAG00000019831	RTCA	100	95.902	Equus_caballus
ENSPTIG00000012816	RTCA	91	84.393	ENSEEUG00000001165	RTCA	100	84.393	Erinaceus_europaeus
ENSPTIG00000012816	RTCA	99	71.745	ENSELUG00000003741	rtca	99	71.745	Esox_lucius
ENSPTIG00000012816	RTCA	100	99.735	ENSFCAG00000024460	RTCA	100	99.735	Felis_catus
ENSPTIG00000012816	RTCA	93	81.765	ENSFALG00000002443	RTCA	91	81.765	Ficedula_albicollis
ENSPTIG00000012816	RTCA	100	94.809	ENSFDAG00000012070	-	100	94.809	Fukomys_damarensis
ENSPTIG00000012816	RTCA	98	73.481	ENSFDAG00000016084	-	100	73.481	Fukomys_damarensis
ENSPTIG00000012816	RTCA	70	62.109	ENSFHEG00000002868	rtca	90	72.115	Fundulus_heteroclitus
ENSPTIG00000012816	RTCA	100	68.852	ENSGMOG00000013264	rtca	100	68.852	Gadus_morhua
ENSPTIG00000012816	RTCA	100	82.787	ENSGALG00000005277	RTCA	100	82.787	Gallus_gallus
ENSPTIG00000012816	RTCA	100	71.311	ENSGAFG00000011853	rtca	99	71.311	Gambusia_affinis
ENSPTIG00000012816	RTCA	100	69.399	ENSGACG00000013497	rtca	100	69.399	Gasterosteus_aculeatus
ENSPTIG00000012816	RTCA	80	84.642	ENSGAGG00000023306	RTCA	100	84.642	Gopherus_agassizii
ENSPTIG00000012816	RTCA	100	93.989	ENSGGOG00000044018	-	100	93.989	Gorilla_gorilla
ENSPTIG00000012816	RTCA	100	94.809	ENSGGOG00000009546	-	100	94.809	Gorilla_gorilla
ENSPTIG00000012816	RTCA	100	69.945	ENSHBUG00000002114	rtca	99	69.945	Haplochromis_burtoni
ENSPTIG00000012816	RTCA	100	93.716	ENSHGLG00000002617	RTCA	100	93.716	Heterocephalus_glaber_female
ENSPTIG00000012816	RTCA	100	93.716	ENSHGLG00100006056	RTCA	100	93.716	Heterocephalus_glaber_male
ENSPTIG00000012816	RTCA	100	63.661	ENSHCOG00000020628	rtca	88	64.266	Hippocampus_comes
ENSPTIG00000012816	RTCA	100	73.224	ENSIPUG00000024803	rtca	100	73.224	Ictalurus_punctatus
ENSPTIG00000012816	RTCA	100	87.978	ENSSTOG00000013528	-	100	87.978	Ictidomys_tridecemlineatus
ENSPTIG00000012816	RTCA	100	83.651	ENSSTOG00000033099	-	100	83.651	Ictidomys_tridecemlineatus
ENSPTIG00000012816	RTCA	100	66.667	ENSJJAG00000016178	Rtca	100	66.667	Jaculus_jaculus
ENSPTIG00000012816	RTCA	99	72.022	ENSKMAG00000006651	rtca	98	72.022	Kryptolebias_marmoratus
ENSPTIG00000012816	RTCA	99	69.529	ENSLBEG00000028971	rtca	99	69.529	Labrus_bergylta
ENSPTIG00000012816	RTCA	88	69.159	ENSLBEG00000002448	-	99	69.159	Labrus_bergylta
ENSPTIG00000012816	RTCA	100	77.869	ENSLACG00000013666	RTCA	100	77.869	Latimeria_chalumnae
ENSPTIG00000012816	RTCA	100	72.951	ENSLOCG00000000093	rtca	99	72.951	Lepisosteus_oculatus
ENSPTIG00000012816	RTCA	100	94.262	ENSLAFG00000001473	RTCA	100	94.262	Loxodonta_africana
ENSPTIG00000012816	RTCA	100	95.082	ENSMFAG00000034132	RTCA	100	95.082	Macaca_fascicularis
ENSPTIG00000012816	RTCA	100	94.536	ENSMMUG00000019105	RTCA	100	94.536	Macaca_mulatta
ENSPTIG00000012816	RTCA	84	94.822	ENSMNEG00000037163	RTCA	100	94.822	Macaca_nemestrina
ENSPTIG00000012816	RTCA	100	78.415	ENSMLEG00000042151	RTCA	100	78.415	Mandrillus_leucophaeus
ENSPTIG00000012816	RTCA	100	73.224	ENSMAMG00000016536	rtca	100	73.224	Mastacembelus_armatus
ENSPTIG00000012816	RTCA	100	70.300	ENSMZEG00005017945	rtca	99	70.300	Maylandia_zebra
ENSPTIG00000012816	RTCA	87	81.191	ENSMGAG00000006892	RTCA	99	81.191	Meleagris_gallopavo
ENSPTIG00000012816	RTCA	100	91.803	ENSMAUG00000008488	Rtca	100	91.803	Mesocricetus_auratus
ENSPTIG00000012816	RTCA	84	95.793	ENSMICG00000008643	RTCA	100	95.793	Microcebus_murinus
ENSPTIG00000012816	RTCA	100	92.623	ENSMOCG00000016660	Rtca	100	92.623	Microtus_ochrogaster
ENSPTIG00000012816	RTCA	84	71.845	ENSMMOG00000007750	rtca	100	71.845	Mola_mola
ENSPTIG00000012816	RTCA	100	91.803	ENSMODG00000003557	RTCA	100	91.803	Monodelphis_domestica
ENSPTIG00000012816	RTCA	100	72.678	ENSMALG00000020844	rtca	100	72.678	Monopterus_albus
ENSPTIG00000012816	RTCA	100	91.803	MGP_CAROLIEiJ_G0025565	Rtca	100	91.803	Mus_caroli
ENSPTIG00000012816	RTCA	100	91.257	ENSMUSG00000000339	Rtca	100	91.257	Mus_musculus
ENSPTIG00000012816	RTCA	100	91.530	MGP_PahariEiJ_G0027011	Rtca	100	91.530	Mus_pahari
ENSPTIG00000012816	RTCA	100	91.530	MGP_SPRETEiJ_G0026515	Rtca	100	91.530	Mus_spretus
ENSPTIG00000012816	RTCA	100	98.634	ENSMPUG00000012119	RTCA	100	98.634	Mustela_putorius_furo
ENSPTIG00000012816	RTCA	100	88.283	ENSMLUG00000009922	RTCA	100	88.283	Myotis_lucifugus
ENSPTIG00000012816	RTCA	100	92.077	ENSNGAG00000011540	Rtca	99	92.077	Nannospalax_galili
ENSPTIG00000012816	RTCA	100	70.219	ENSNBRG00000003062	rtca	99	70.219	Neolamprologus_brichardi
ENSPTIG00000012816	RTCA	100	94.809	ENSNLEG00000031426	RTCA	100	94.809	Nomascus_leucogenys
ENSPTIG00000012816	RTCA	59	95.122	ENSMEUG00000010030	-	77	78.788	Notamacropus_eugenii
ENSPTIG00000012816	RTCA	73	89.219	ENSOPRG00000012092	RTCA	71	89.219	Ochotona_princeps
ENSPTIG00000012816	RTCA	95	94.253	ENSODEG00000006990	RTCA	96	94.302	Octodon_degus
ENSPTIG00000012816	RTCA	100	70.027	ENSONIG00000007753	rtca	99	70.027	Oreochromis_niloticus
ENSPTIG00000012816	RTCA	87	88.013	ENSOANG00000012055	RTCA	99	87.539	Ornithorhynchus_anatinus
ENSPTIG00000012816	RTCA	100	96.448	ENSOCUG00000014247	RTCA	100	96.448	Oryctolagus_cuniculus
ENSPTIG00000012816	RTCA	100	70.492	ENSORLG00000013605	rtca	100	70.492	Oryzias_latipes
ENSPTIG00000012816	RTCA	100	70.492	ENSORLG00020001904	rtca	100	70.492	Oryzias_latipes_hni
ENSPTIG00000012816	RTCA	100	70.492	ENSORLG00015021064	rtca	100	70.492	Oryzias_latipes_hsok
ENSPTIG00000012816	RTCA	100	71.038	ENSOMEG00000000756	rtca	100	71.038	Oryzias_melastigma
ENSPTIG00000012816	RTCA	100	85.792	ENSOGAG00000005627	RTCA	100	85.792	Otolemur_garnettii
ENSPTIG00000012816	RTCA	87	95.597	ENSOARG00000018122	RTCA	100	95.597	Ovis_aries
ENSPTIG00000012816	RTCA	100	91.384	ENSPPAG00000035119	RTCA	100	94.498	Pan_paniscus
ENSPTIG00000012816	RTCA	100	99.471	ENSPPRG00000000350	RTCA	100	99.471	Panthera_pardus
ENSPTIG00000012816	RTCA	100	91.384	ENSPTRG00000001004	RTCA	100	94.498	Pan_troglodytes
ENSPTIG00000012816	RTCA	100	94.809	ENSPANG00000000346	RTCA	100	94.809	Papio_anubis
ENSPTIG00000012816	RTCA	100	74.317	ENSPKIG00000001653	rtca	100	74.317	Paramormyrops_kingsleyae
ENSPTIG00000012816	RTCA	100	84.153	ENSPSIG00000011408	RTCA	100	84.153	Pelodiscus_sinensis
ENSPTIG00000012816	RTCA	100	92.350	ENSPEMG00000018582	Rtca	100	92.350	Peromyscus_maniculatus_bairdii
ENSPTIG00000012816	RTCA	99	58.011	ENSPMAG00000009110	rtca	99	57.534	Petromyzon_marinus
ENSPTIG00000012816	RTCA	100	92.077	ENSPCIG00000007684	RTCA	100	92.077	Phascolarctos_cinereus
ENSPTIG00000012816	RTCA	100	71.662	ENSPFOG00000004824	rtca	100	71.662	Poecilia_formosa
ENSPTIG00000012816	RTCA	100	71.858	ENSPLAG00000011753	rtca	99	71.858	Poecilia_latipinna
ENSPTIG00000012816	RTCA	100	71.858	ENSPMEG00000020469	rtca	99	71.858	Poecilia_mexicana
ENSPTIG00000012816	RTCA	100	72.678	ENSPREG00000001365	rtca	99	72.678	Poecilia_reticulata
ENSPTIG00000012816	RTCA	100	94.809	ENSPPYG00000001115	RTCA	100	94.809	Pongo_abelii
ENSPTIG00000012816	RTCA	100	91.530	ENSPCAG00000005076	RTCA	100	91.530	Procavia_capensis
ENSPTIG00000012816	RTCA	100	96.995	ENSPCOG00000005603	RTCA	100	96.995	Propithecus_coquereli
ENSPTIG00000012816	RTCA	100	92.428	ENSPVAG00000009478	RTCA	100	92.428	Pteropus_vampyrus
ENSPTIG00000012816	RTCA	100	70.300	ENSPNYG00000004722	rtca	99	70.300	Pundamilia_nyererei
ENSPTIG00000012816	RTCA	100	72.951	ENSPNAG00000022270	rtca	100	72.951	Pygocentrus_nattereri
ENSPTIG00000012816	RTCA	100	92.077	ENSRNOG00000014575	Rtca	100	92.077	Rattus_norvegicus
ENSPTIG00000012816	RTCA	100	91.384	ENSRBIG00000041180	RTCA	100	94.175	Rhinopithecus_bieti
ENSPTIG00000012816	RTCA	100	94.536	ENSRROG00000024929	RTCA	100	94.536	Rhinopithecus_roxellana
ENSPTIG00000012816	RTCA	100	93.443	ENSSBOG00000028626	RTCA	100	93.443	Saimiri_boliviensis_boliviensis
ENSPTIG00000012816	RTCA	100	92.350	ENSSHAG00000001758	RTCA	100	92.350	Sarcophilus_harrisii
ENSPTIG00000012816	RTCA	98	69.444	ENSSMAG00000014680	rtca	97	69.444	Scophthalmus_maximus
ENSPTIG00000012816	RTCA	98	71.667	ENSSDUG00000015585	rtca	97	71.667	Seriola_dumerili
ENSPTIG00000012816	RTCA	96	72.080	ENSSLDG00000018985	rtca	95	72.080	Seriola_lalandi_dorsalis
ENSPTIG00000012816	RTCA	87	86.120	ENSSARG00000013993	RTCA	100	86.120	Sorex_araneus
ENSPTIG00000012816	RTCA	100	70.219	ENSSPAG00000011938	rtca	99	70.219	Stegastes_partitus
ENSPTIG00000012816	RTCA	100	96.721	ENSSSCG00000006865	RTCA	100	96.721	Sus_scrofa
ENSPTIG00000012816	RTCA	100	82.787	ENSTGUG00000005154	RTCA	100	82.787	Taeniopygia_guttata
ENSPTIG00000012816	RTCA	100	70.765	ENSTRUG00000008799	rtca	100	70.765	Takifugu_rubripes
ENSPTIG00000012816	RTCA	100	72.131	ENSTNIG00000004725	rtca	100	72.131	Tetraodon_nigroviridis
ENSPTIG00000012816	RTCA	60	85.088	ENSTBEG00000000943	RTCA	82	66.387	Tupaia_belangeri
ENSPTIG00000012816	RTCA	100	92.950	ENSTTRG00000015327	RTCA	100	92.950	Tursiops_truncatus
ENSPTIG00000012816	RTCA	94	95.335	ENSUAMG00000017265	RTCA	96	95.335	Ursus_americanus
ENSPTIG00000012816	RTCA	100	97.541	ENSUMAG00000007881	RTCA	100	97.541	Ursus_maritimus
ENSPTIG00000012816	RTCA	87	86.120	ENSVPAG00000001039	RTCA	84	86.120	Vicugna_pacos
ENSPTIG00000012816	RTCA	100	98.087	ENSVVUG00000022041	RTCA	68	98.087	Vulpes_vulpes
ENSPTIG00000012816	RTCA	99	65.479	ENSXETG00000031661	RTCA	99	65.479	Xenopus_tropicalis
ENSPTIG00000012816	RTCA	100	62.295	ENSXCOG00000008002	rtca	100	62.295	Xiphophorus_couchianus
ENSPTIG00000012816	RTCA	100	71.585	ENSXMAG00000005482	rtca	99	71.585	Xiphophorus_maculatus