EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000013331 (Gene tree)
Gene ID: 102963479
Gene Symbol: PRDM10
Alias: -
Full Name: PR/SET domain 10
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 65262 bases
Position: chrKE721767.1:5568136-5633397
Accession: 102963479
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000013855	zf-C2H2	PF00096.26	6.3e-33	1	5
ENSPTIP00000013855	zf-C2H2	PF00096.26	6.3e-33	2	5
ENSPTIP00000013855	zf-C2H2	PF00096.26	6.3e-33	3	5
ENSPTIP00000013855	zf-C2H2	PF00096.26	6.3e-33	4	5
ENSPTIP00000013855	zf-C2H2	PF00096.26	6.3e-33	5	5
ENSPTIP00000013868	zf-C2H2	PF00096.26	6.5e-33	1	5
ENSPTIP00000013868	zf-C2H2	PF00096.26	6.5e-33	2	5
ENSPTIP00000013868	zf-C2H2	PF00096.26	6.5e-33	3	5
ENSPTIP00000013868	zf-C2H2	PF00096.26	6.5e-33	4	5
ENSPTIP00000013868	zf-C2H2	PF00096.26	6.5e-33	5	5
ENSPTIP00000013855	zf-met	PF12874.7	8.5e-06	1	2
ENSPTIP00000013855	zf-met	PF12874.7	8.5e-06	2	2
ENSPTIP00000013868	zf-met	PF12874.7	8.6e-06	1	2
ENSPTIP00000013868	zf-met	PF12874.7	8.6e-06	2	2
ENSPTIP00000013855	zf-C2H2_jaz	PF12171.8	1.8e-16	1	1
ENSPTIP00000013868	zf-C2H2_jaz	PF12171.8	1.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000017942	PRDM10-202	3471	-	ENSPTIP00000013868	1156 (aa)	-	-
ENSPTIT00000017929	PRDM10-201	6352	XM_007082685	ENSPTIP00000013855	1152 (aa)	XP_007082747	UPI00042B9F13

Gene Model

Click here to download ENSPTIG00000013331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000013331's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000013331	PRDM10	50	31.892	ENSPTIG00000010807	PRDM5	73	35.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000013331	PRDM10	100	94.655	ENSG00000170325	PRDM10	100	94.655	Homo_sapiens
ENSPTIG00000013331	PRDM10	100	93.802	ENSAMEG00000002425	PRDM10	100	93.802	Ailuropoda_melanoleuca
ENSPTIG00000013331	PRDM10	100	84.814	ENSAPLG00000004858	PRDM10	100	84.987	Anas_platyrhynchos
ENSPTIG00000013331	PRDM10	100	87.156	ENSANAG00000022064	PRDM10	100	80.739	Aotus_nancymaae
ENSPTIG00000013331	PRDM10	100	94.810	ENSBTAG00000019001	PRDM10	100	94.464	Bos_taurus
ENSPTIG00000013331	PRDM10	100	94.651	ENSCJAG00000009235	PRDM10	100	94.651	Callithrix_jacchus
ENSPTIG00000013331	PRDM10	100	95.573	ENSCAFG00000010164	PRDM10	100	95.573	Canis_familiaris
ENSPTIG00000013331	PRDM10	100	94.373	ENSCAFG00020010152	PRDM10	100	94.373	Canis_lupus_dingo
ENSPTIG00000013331	PRDM10	100	94.878	ENSCHIG00000026530	PRDM10	100	94.531	Capra_hircus
ENSPTIG00000013331	PRDM10	100	95.259	ENSTSYG00000000544	PRDM10	100	95.259	Carlito_syrichta
ENSPTIG00000013331	PRDM10	100	85.763	ENSCAPG00000017296	PRDM10	97	91.379	Cavia_aperea
ENSPTIG00000013331	PRDM10	92	86.296	ENSCPOG00000000389	PRDM10	97	86.296	Cavia_porcellus
ENSPTIG00000013331	PRDM10	100	94.392	ENSCCAG00000024567	PRDM10	100	94.651	Cebus_capucinus
ENSPTIG00000013331	PRDM10	100	95.147	ENSCATG00000040031	PRDM10	100	95.147	Cercocebus_atys
ENSPTIG00000013331	PRDM10	100	90.660	ENSCLAG00000014605	PRDM10	99	97.403	Chinchilla_lanigera
ENSPTIG00000013331	PRDM10	100	95.061	ENSCSAG00000002202	PRDM10	100	95.494	Chlorocebus_sabaeus
ENSPTIG00000013331	PRDM10	100	82.793	ENSCPBG00000026880	PRDM10	99	82.627	Chrysemys_picta_bellii
ENSPTIG00000013331	PRDM10	100	94.737	ENSCANG00000032669	PRDM10	100	94.996	Colobus_angolensis_palliatus
ENSPTIG00000013331	PRDM10	100	91.609	ENSCGRG00001021647	Prdm10	98	91.609	Cricetulus_griseus_chok1gshd
ENSPTIG00000013331	PRDM10	100	91.609	ENSCGRG00000006562	Prdm10	98	91.609	Cricetulus_griseus_crigri
ENSPTIG00000013331	PRDM10	82	94.515	ENSDNOG00000001366	PRDM10	95	94.515	Dasypus_novemcinctus
ENSPTIG00000013331	PRDM10	100	93.322	ENSDORG00000014292	Prdm10	100	93.322	Dipodomys_ordii
ENSPTIG00000013331	PRDM10	100	96.354	ENSEASG00005022914	PRDM10	100	96.354	Equus_asinus_asinus
ENSPTIG00000013331	PRDM10	100	96.267	ENSECAG00000011499	PRDM10	100	96.267	Equus_caballus
ENSPTIG00000013331	PRDM10	98	99.823	ENSFCAG00000004111	PRDM10	96	99.823	Felis_catus
ENSPTIG00000013331	PRDM10	100	81.537	ENSFALG00000004873	PRDM10	100	80.952	Ficedula_albicollis
ENSPTIG00000013331	PRDM10	100	90.017	ENSFDAG00000017311	PRDM10	97	93.671	Fukomys_damarensis
ENSPTIG00000013331	PRDM10	100	82.068	ENSGALG00000033660	PRDM10	99	85.637	Gallus_gallus
ENSPTIG00000013331	PRDM10	92	66.667	ENSGACG00000012293	prdm10	99	66.667	Gasterosteus_aculeatus
ENSPTIG00000013331	PRDM10	100	84.450	ENSGAGG00000012523	PRDM10	99	84.278	Gopherus_agassizii
ENSPTIG00000013331	PRDM10	100	94.918	ENSGGOG00000015359	PRDM10	100	94.918	Gorilla_gorilla
ENSPTIG00000013331	PRDM10	100	90.460	ENSHGLG00000001106	PRDM10	100	90.630	Heterocephalus_glaber_female
ENSPTIG00000013331	PRDM10	100	90.870	ENSHGLG00100002350	PRDM10	100	90.785	Heterocephalus_glaber_male
ENSPTIG00000013331	PRDM10	100	94.372	ENSSTOG00000002015	PRDM10	100	94.632	Ictidomys_tridecemlineatus
ENSPTIG00000013331	PRDM10	82	92.235	ENSJJAG00000021493	Prdm10	90	91.667	Jaculus_jaculus
ENSPTIG00000013331	PRDM10	100	91.144	ENSLAFG00000031867	PRDM10	100	91.144	Loxodonta_africana
ENSPTIG00000013331	PRDM10	100	95.078	ENSMFAG00000031008	PRDM10	100	95.078	Macaca_fascicularis
ENSPTIG00000013331	PRDM10	100	95.078	ENSMMUG00000017555	PRDM10	100	95.078	Macaca_mulatta
ENSPTIG00000013331	PRDM10	100	94.991	ENSMNEG00000036493	PRDM10	100	94.991	Macaca_nemestrina
ENSPTIG00000013331	PRDM10	94	96.078	ENSMLEG00000042028	PRDM10	99	97.468	Mandrillus_leucophaeus
ENSPTIG00000013331	PRDM10	100	82.274	ENSMGAG00000001112	PRDM10	100	82.274	Meleagris_gallopavo
ENSPTIG00000013331	PRDM10	100	94.991	ENSMICG00000013888	PRDM10	100	94.991	Microcebus_murinus
ENSPTIG00000013331	PRDM10	100	90.347	ENSMOCG00000021853	Prdm10	99	95.890	Microtus_ochrogaster
ENSPTIG00000013331	PRDM10	75	87.287	ENSMODG00000004979	PRDM10	99	88.435	Monodelphis_domestica
ENSPTIG00000013331	PRDM10	100	89.924	ENSMUSG00000042496	Prdm10	100	89.924	Mus_musculus
ENSPTIG00000013331	PRDM10	100	91.803	MGP_SPRETEiJ_G0033061	-	100	91.803	Mus_spretus
ENSPTIG00000013331	PRDM10	100	97.222	ENSMPUG00000008711	PRDM10	99	97.222	Mustela_putorius_furo
ENSPTIG00000013331	PRDM10	100	94.031	ENSMLUG00000013051	PRDM10	100	94.118	Myotis_lucifugus
ENSPTIG00000013331	PRDM10	100	93.755	ENSNGAG00000000580	Prdm10	100	93.755	Nannospalax_galili
ENSPTIG00000013331	PRDM10	100	95.164	ENSNLEG00000007488	PRDM10	100	95.164	Nomascus_leucogenys
ENSPTIG00000013331	PRDM10	100	89.720	ENSODEG00000005309	PRDM10	99	94.805	Octodon_degus
ENSPTIG00000013331	PRDM10	100	80.717	ENSOANG00000000577	-	100	79.693	Ornithorhynchus_anatinus
ENSPTIG00000013331	PRDM10	100	92.541	ENSOCUG00000003736	PRDM10	100	92.541	Oryctolagus_cuniculus
ENSPTIG00000013331	PRDM10	100	93.523	ENSOGAG00000010723	PRDM10	100	93.523	Otolemur_garnettii
ENSPTIG00000013331	PRDM10	100	95.052	ENSOARG00000014507	PRDM10	100	94.705	Ovis_aries
ENSPTIG00000013331	PRDM10	100	94.832	ENSPPAG00000042881	PRDM10	100	94.832	Pan_paniscus
ENSPTIG00000013331	PRDM10	100	99.913	ENSPPRG00000007002	PRDM10	100	99.913	Panthera_pardus
ENSPTIG00000013331	PRDM10	100	94.918	ENSPTRG00000004477	PRDM10	100	94.918	Pan_troglodytes
ENSPTIG00000013331	PRDM10	100	95.078	ENSPANG00000017470	PRDM10	100	95.078	Papio_anubis
ENSPTIG00000013331	PRDM10	100	90.553	ENSPEMG00000014985	Prdm10	100	90.553	Peromyscus_maniculatus_bairdii
ENSPTIG00000013331	PRDM10	100	94.896	ENSPPYG00000004061	PRDM10	100	94.896	Pongo_abelii
ENSPTIG00000013331	PRDM10	92	84.809	ENSPCAG00000014514	PRDM10	100	84.781	Procavia_capensis
ENSPTIG00000013331	PRDM10	100	80.640	ENSPCOG00000023406	PRDM10	100	81.137	Propithecus_coquereli
ENSPTIG00000013331	PRDM10	100	96.280	ENSPVAG00000012764	PRDM10	100	96.280	Pteropus_vampyrus
ENSPTIG00000013331	PRDM10	100	91.688	ENSRNOG00000007853	Prdm10	100	91.688	Rattus_norvegicus
ENSPTIG00000013331	PRDM10	100	94.828	ENSRBIG00000030924	PRDM10	100	94.828	Rhinopithecus_bieti
ENSPTIG00000013331	PRDM10	100	94.828	ENSRROG00000034334	PRDM10	100	94.828	Rhinopithecus_roxellana
ENSPTIG00000013331	PRDM10	100	94.655	ENSSBOG00000008773	PRDM10	100	94.655	Saimiri_boliviensis_boliviensis
ENSPTIG00000013331	PRDM10	99	87.500	ENSSHAG00000004503	PRDM10	99	88.200	Sarcophilus_harrisii
ENSPTIG00000013331	PRDM10	67	100.000	ENSSARG00000013953	-	68	100.000	Sorex_araneus
ENSPTIG00000013331	PRDM10	100	80.981	ENSSPUG00000001178	PRDM10	97	84.977	Sphenodon_punctatus
ENSPTIG00000013331	PRDM10	100	94.118	ENSSSCG00000015243	PRDM10	100	94.472	Sus_scrofa
ENSPTIG00000013331	PRDM10	100	84.079	ENSTGUG00000000530	PRDM10	100	84.079	Taeniopygia_guttata
ENSPTIG00000013331	PRDM10	95	94.027	ENSTBEG00000007221	PRDM10	94	94.027	Tupaia_belangeri
ENSPTIG00000013331	PRDM10	100	92.820	ENSTTRG00000009189	PRDM10	100	92.128	Tursiops_truncatus
ENSPTIG00000013331	PRDM10	91	95.591	ENSUAMG00000018832	PRDM10	97	95.330	Ursus_americanus
ENSPTIG00000013331	PRDM10	100	95.026	ENSUMAG00000003167	PRDM10	99	97.536	Ursus_maritimus
ENSPTIG00000013331	PRDM10	100	96.875	ENSVVUG00000019878	PRDM10	100	96.875	Vulpes_vulpes
ENSPTIG00000013331	PRDM10	100	69.064	ENSXETG00000032173	PRDM10	100	69.064	Xenopus_tropicalis