EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000013502 (Gene tree)
Gene ID: 102949935
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 15171 bases
Position: chrKE721563.1:5210634-5225804
Accession: 102949935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000013931	zf-U11-48K	PF05253.12	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000018007	SNRNP48-201	1460	XM_015534743	ENSPTIP00000013931	287 (aa)	XP_015390229	-

Gene Model

Click here to download ENSPTIG00000013502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000013502's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000013502	SNRNP48	99	95.053	ENSG00000168566	SNRNP48	85	94.774	Homo_sapiens
ENSPTIG00000013502	SNRNP48	77	50.862	ENSAPOG00000021430	snrnp48	69	50.420	Acanthochromis_polyacanthus
ENSPTIG00000013502	SNRNP48	99	92.881	ENSAMEG00000017349	SNRNP48	85	92.881	Ailuropoda_melanoleuca
ENSPTIG00000013502	SNRNP48	79	50.435	ENSACIG00000002032	snrnp48	68	50.435	Amphilophus_citrinellus
ENSPTIG00000013502	SNRNP48	77	50.862	ENSAOCG00000010562	snrnp48	69	50.420	Amphiprion_ocellaris
ENSPTIG00000013502	SNRNP48	77	51.754	ENSAPEG00000003231	snrnp48	68	51.282	Amphiprion_percula
ENSPTIG00000013502	SNRNP48	77	51.082	ENSATEG00000020210	snrnp48	71	50.628	Anabas_testudineus
ENSPTIG00000013502	SNRNP48	98	64.726	ENSACAG00000002811	SNRNP48	90	64.726	Anolis_carolinensis
ENSPTIG00000013502	SNRNP48	99	93.993	ENSANAG00000033538	SNRNP48	85	93.728	Aotus_nancymaae
ENSPTIG00000013502	SNRNP48	92	46.886	ENSAMXG00000015309	snrnp48	72	50.000	Astyanax_mexicanus
ENSPTIG00000013502	SNRNP48	99	90.813	ENSBTAG00000001123	SNRNP48	84	90.244	Bos_taurus
ENSPTIG00000013502	SNRNP48	99	94.700	ENSCJAG00000021330	SNRNP48	85	94.425	Callithrix_jacchus
ENSPTIG00000013502	SNRNP48	100	95.819	ENSCAFG00000009574	SNRNP48	71	95.819	Canis_familiaris
ENSPTIG00000013502	SNRNP48	100	96.167	ENSCAFG00020013203	SNRNP48	84	96.167	Canis_lupus_dingo
ENSPTIG00000013502	SNRNP48	99	92.226	ENSCHIG00000015216	SNRNP48	84	91.638	Capra_hircus
ENSPTIG00000013502	SNRNP48	99	92.982	ENSTSYG00000000698	SNRNP48	85	92.334	Carlito_syrichta
ENSPTIG00000013502	SNRNP48	99	89.510	ENSCAPG00000006768	SNRNP48	93	89.510	Cavia_aperea
ENSPTIG00000013502	SNRNP48	99	89.753	ENSCPOG00000007910	SNRNP48	84	89.510	Cavia_porcellus
ENSPTIG00000013502	SNRNP48	99	93.286	ENSCCAG00000035652	SNRNP48	85	93.031	Cebus_capucinus
ENSPTIG00000013502	SNRNP48	99	93.640	ENSCATG00000033947	SNRNP48	85	93.380	Cercocebus_atys
ENSPTIG00000013502	SNRNP48	99	90.459	ENSCLAG00000003765	SNRNP48	84	90.210	Chinchilla_lanigera
ENSPTIG00000013502	SNRNP48	100	94.425	ENSCSAG00000007409	SNRNP48	85	94.425	Chlorocebus_sabaeus
ENSPTIG00000013502	SNRNP48	98	66.443	ENSCPBG00000019146	SNRNP48	90	66.443	Chrysemys_picta_bellii
ENSPTIG00000013502	SNRNP48	98	32.192	ENSCING00000004121	-	87	32.107	Ciona_intestinalis
ENSPTIG00000013502	SNRNP48	99	94.346	ENSCANG00000030017	SNRNP48	85	94.077	Colobus_angolensis_palliatus
ENSPTIG00000013502	SNRNP48	99	71.378	ENSCGRG00001008805	-	82	70.671	Cricetulus_griseus_chok1gshd
ENSPTIG00000013502	SNRNP48	100	88.850	ENSCGRG00001001076	-	85	88.502	Cricetulus_griseus_chok1gshd
ENSPTIG00000013502	SNRNP48	100	88.850	ENSCGRG00000007781	Snrnp48	85	88.502	Cricetulus_griseus_crigri
ENSPTIG00000013502	SNRNP48	75	50.463	ENSCSEG00000000722	snrnp48	66	48.927	Cynoglossus_semilaevis
ENSPTIG00000013502	SNRNP48	85	47.638	ENSCVAG00000019829	snrnp48	52	51.942	Cyprinodon_variegatus
ENSPTIG00000013502	SNRNP48	79	48.936	ENSDARG00000039989	snrnp48	68	48.936	Danio_rerio
ENSPTIG00000013502	SNRNP48	100	93.380	ENSDNOG00000014978	SNRNP48	84	93.380	Dasypus_novemcinctus
ENSPTIG00000013502	SNRNP48	99	88.811	ENSDORG00000015140	Snrnp48	84	88.502	Dipodomys_ordii
ENSPTIG00000013502	SNRNP48	99	95.804	ENSEASG00005012021	SNRNP48	85	95.470	Equus_asinus_asinus
ENSPTIG00000013502	SNRNP48	100	96.167	ENSECAG00000026937	SNRNP48	85	96.167	Equus_caballus
ENSPTIG00000013502	SNRNP48	100	68.403	ENSEEUG00000015437	SNRNP48	84	68.056	Erinaceus_europaeus
ENSPTIG00000013502	SNRNP48	87	49.027	ENSELUG00000009766	snrnp48	65	50.638	Esox_lucius
ENSPTIG00000013502	SNRNP48	100	99.652	ENSFCAG00000018853	SNRNP48	85	99.652	Felis_catus
ENSPTIG00000013502	SNRNP48	98	65.411	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSPTIG00000013502	SNRNP48	99	89.474	ENSFDAG00000009231	SNRNP48	84	89.161	Fukomys_damarensis
ENSPTIG00000013502	SNRNP48	70	54.455	ENSFHEG00000014647	snrnp48	97	44.781	Fundulus_heteroclitus
ENSPTIG00000013502	SNRNP48	70	52.451	ENSGMOG00000018599	-	71	51.570	Gadus_morhua
ENSPTIG00000013502	SNRNP48	91	66.421	ENSGALG00000013005	SNRNP48	83	67.206	Gallus_gallus
ENSPTIG00000013502	SNRNP48	81	49.573	ENSGAFG00000021639	snrnp48	69	44.128	Gambusia_affinis
ENSPTIG00000013502	SNRNP48	69	52.970	ENSGACG00000017756	-	74	48.810	Gasterosteus_aculeatus
ENSPTIG00000013502	SNRNP48	98	65.436	ENSGAGG00000000865	SNRNP48	96	65.436	Gopherus_agassizii
ENSPTIG00000013502	SNRNP48	99	94.700	ENSGGOG00000013220	SNRNP48	85	94.425	Gorilla_gorilla
ENSPTIG00000013502	SNRNP48	96	44.912	ENSHBUG00000017066	snrnp48	81	42.424	Haplochromis_burtoni
ENSPTIG00000013502	SNRNP48	99	91.228	ENSHGLG00000015241	SNRNP48	84	90.909	Heterocephalus_glaber_female
ENSPTIG00000013502	SNRNP48	99	91.228	ENSHGLG00100010027	SNRNP48	84	90.909	Heterocephalus_glaber_male
ENSPTIG00000013502	SNRNP48	70	50.000	ENSHCOG00000014066	snrnp48	70	47.131	Hippocampus_comes
ENSPTIG00000013502	SNRNP48	100	94.077	ENSSTOG00000014635	SNRNP48	85	94.077	Ictidomys_tridecemlineatus
ENSPTIG00000013502	SNRNP48	100	85.366	ENSJJAG00000011495	Snrnp48	85	85.366	Jaculus_jaculus
ENSPTIG00000013502	SNRNP48	89	45.525	ENSKMAG00000016514	snrnp48	67	48.485	Kryptolebias_marmoratus
ENSPTIG00000013502	SNRNP48	72	52.336	ENSLBEG00000026249	snrnp48	69	50.638	Labrus_bergylta
ENSPTIG00000013502	SNRNP48	100	55.137	ENSLACG00000003958	SNRNP48	85	55.137	Latimeria_chalumnae
ENSPTIG00000013502	SNRNP48	82	52.066	ENSLOCG00000004187	snrnp48	82	49.310	Lepisosteus_oculatus
ENSPTIG00000013502	SNRNP48	99	89.399	ENSLAFG00000011152	SNRNP48	85	89.199	Loxodonta_africana
ENSPTIG00000013502	SNRNP48	99	94.700	ENSMFAG00000045216	SNRNP48	85	94.425	Macaca_fascicularis
ENSPTIG00000013502	SNRNP48	99	94.700	ENSMMUG00000014785	SNRNP48	85	94.425	Macaca_mulatta
ENSPTIG00000013502	SNRNP48	99	94.346	ENSMNEG00000042269	SNRNP48	85	94.077	Macaca_nemestrina
ENSPTIG00000013502	SNRNP48	99	94.700	ENSMLEG00000034004	SNRNP48	85	94.425	Mandrillus_leucophaeus
ENSPTIG00000013502	SNRNP48	71	52.657	ENSMAMG00000018673	snrnp48	60	50.862	Mastacembelus_armatus
ENSPTIG00000013502	SNRNP48	98	65.306	ENSMGAG00000006037	SNRNP48	99	64.726	Meleagris_gallopavo
ENSPTIG00000013502	SNRNP48	100	88.850	ENSMAUG00000011944	Snrnp48	85	88.502	Mesocricetus_auratus
ENSPTIG00000013502	SNRNP48	99	91.166	ENSMICG00000012497	SNRNP48	85	90.941	Microcebus_murinus
ENSPTIG00000013502	SNRNP48	100	88.153	ENSMOCG00000015555	Snrnp48	85	87.805	Microtus_ochrogaster
ENSPTIG00000013502	SNRNP48	64	52.688	ENSMMOG00000003072	-	58	52.688	Mola_mola
ENSPTIG00000013502	SNRNP48	99	72.789	ENSMODG00000009996	SNRNP48	80	72.789	Monodelphis_domestica
ENSPTIG00000013502	SNRNP48	70	55.122	ENSMALG00000005725	snrnp48	68	51.724	Monopterus_albus
ENSPTIG00000013502	SNRNP48	100	87.456	MGP_CAROLIEiJ_G0018441	Snrnp48	85	87.456	Mus_caroli
ENSPTIG00000013502	SNRNP48	100	87.108	ENSMUSG00000021431	Snrnp48	85	87.108	Mus_musculus
ENSPTIG00000013502	SNRNP48	100	86.760	MGP_PahariEiJ_G0019509	Snrnp48	85	86.760	Mus_pahari
ENSPTIG00000013502	SNRNP48	100	86.411	MGP_SPRETEiJ_G0019321	Snrnp48	85	86.411	Mus_spretus
ENSPTIG00000013502	SNRNP48	99	87.063	ENSNGAG00000004849	Snrnp48	84	87.063	Nannospalax_galili
ENSPTIG00000013502	SNRNP48	70	51.724	ENSNBRG00000012127	snrnp48	68	48.729	Neolamprologus_brichardi
ENSPTIG00000013502	SNRNP48	99	95.053	ENSNLEG00000011667	SNRNP48	85	94.774	Nomascus_leucogenys
ENSPTIG00000013502	SNRNP48	94	79.705	ENSOPRG00000015471	SNRNP48	84	79.705	Ochotona_princeps
ENSPTIG00000013502	SNRNP48	70	52.217	ENSONIG00000001520	snrnp48	68	49.153	Oreochromis_niloticus
ENSPTIG00000013502	SNRNP48	50	72.917	ENSOANG00000019888	-	70	72.603	Ornithorhynchus_anatinus
ENSPTIG00000013502	SNRNP48	87	90.400	ENSOCUG00000005168	SNRNP48	83	90.079	Oryctolagus_cuniculus
ENSPTIG00000013502	SNRNP48	86	49.213	ENSORLG00000015654	snrnp48	68	51.271	Oryzias_latipes
ENSPTIG00000013502	SNRNP48	86	48.819	ENSORLG00020015976	snrnp48	58	50.424	Oryzias_latipes_hni
ENSPTIG00000013502	SNRNP48	86	50.000	ENSORLG00015022379	snrnp48	58	51.695	Oryzias_latipes_hsok
ENSPTIG00000013502	SNRNP48	79	50.638	ENSOMEG00000022007	snrnp48	68	51.489	Oryzias_melastigma
ENSPTIG00000013502	SNRNP48	93	93.609	ENSOGAG00000005275	SNRNP48	82	93.750	Otolemur_garnettii
ENSPTIG00000013502	SNRNP48	100	90.244	ENSOARG00000017319	SNRNP48	100	90.244	Ovis_aries
ENSPTIG00000013502	SNRNP48	99	95.053	ENSPPAG00000032873	SNRNP48	85	94.774	Pan_paniscus
ENSPTIG00000013502	SNRNP48	100	100.000	ENSPPRG00000004283	SNRNP48	85	100.000	Panthera_pardus
ENSPTIG00000013502	SNRNP48	99	95.053	ENSPTRG00000017703	SNRNP48	85	94.774	Pan_troglodytes
ENSPTIG00000013502	SNRNP48	99	94.700	ENSPANG00000000771	SNRNP48	85	94.425	Papio_anubis
ENSPTIG00000013502	SNRNP48	98	45.928	ENSPKIG00000013703	snrnp48	52	51.012	Paramormyrops_kingsleyae
ENSPTIG00000013502	SNRNP48	98	64.310	ENSPSIG00000002213	SNRNP48	93	64.310	Pelodiscus_sinensis
ENSPTIG00000013502	SNRNP48	72	50.943	ENSPMGG00000008120	snrnp48	73	50.943	Periophthalmus_magnuspinnatus
ENSPTIG00000013502	SNRNP48	100	88.850	ENSPEMG00000008872	Snrnp48	85	88.502	Peromyscus_maniculatus_bairdii
ENSPTIG00000013502	SNRNP48	71	54.369	ENSPFOG00000003578	snrnp48	69	45.552	Poecilia_formosa
ENSPTIG00000013502	SNRNP48	63	53.804	ENSPLAG00000002290	snrnp48	63	53.804	Poecilia_latipinna
ENSPTIG00000013502	SNRNP48	71	53.398	ENSPMEG00000018033	snrnp48	69	44.840	Poecilia_mexicana
ENSPTIG00000013502	SNRNP48	69	53.731	ENSPREG00000018541	snrnp48	68	50.211	Poecilia_reticulata
ENSPTIG00000013502	SNRNP48	99	93.286	ENSPPYG00000016209	SNRNP48	85	93.031	Pongo_abelii
ENSPTIG00000013502	SNRNP48	74	67.299	ENSPCAG00000011991	SNRNP48	80	67.442	Procavia_capensis
ENSPTIG00000013502	SNRNP48	99	93.993	ENSPVAG00000002854	SNRNP48	85	93.728	Pteropus_vampyrus
ENSPTIG00000013502	SNRNP48	70	52.709	ENSPNYG00000015399	snrnp48	75	49.576	Pundamilia_nyererei
ENSPTIG00000013502	SNRNP48	100	88.502	ENSRNOG00000013756	Snrnp48	85	88.502	Rattus_norvegicus
ENSPTIG00000013502	SNRNP48	89	94.094	ENSRBIG00000043856	SNRNP48	80	94.444	Rhinopithecus_bieti
ENSPTIG00000013502	SNRNP48	99	94.346	ENSRROG00000043229	SNRNP48	85	94.077	Rhinopithecus_roxellana
ENSPTIG00000013502	SNRNP48	99	93.993	ENSSBOG00000019486	SNRNP48	85	93.728	Saimiri_boliviensis_boliviensis
ENSPTIG00000013502	SNRNP48	99	73.720	ENSSHAG00000014483	SNRNP48	84	73.720	Sarcophilus_harrisii
ENSPTIG00000013502	SNRNP48	71	54.146	ENSSFOG00015006610	snrnp48	59	50.806	Scleropages_formosus
ENSPTIG00000013502	SNRNP48	79	50.840	ENSSDUG00000014953	snrnp48	69	50.840	Seriola_dumerili
ENSPTIG00000013502	SNRNP48	79	51.261	ENSSLDG00000005989	snrnp48	68	51.261	Seriola_lalandi_dorsalis
ENSPTIG00000013502	SNRNP48	98	65.646	ENSSPUG00000006257	SNRNP48	84	65.646	Sphenodon_punctatus
ENSPTIG00000013502	SNRNP48	77	51.304	ENSSPAG00000006454	snrnp48	69	50.847	Stegastes_partitus
ENSPTIG00000013502	SNRNP48	98	64.605	ENSTGUG00000007575	SNRNP48	93	64.014	Taeniopygia_guttata
ENSPTIG00000013502	SNRNP48	69	54.726	ENSTRUG00000007031	snrnp48	69	52.155	Takifugu_rubripes
ENSPTIG00000013502	SNRNP48	69	50.746	ENSTNIG00000012977	-	60	50.746	Tetraodon_nigroviridis
ENSPTIG00000013502	SNRNP48	100	72.125	ENSTBEG00000015620	SNRNP48	85	72.125	Tupaia_belangeri
ENSPTIG00000013502	SNRNP48	99	93.640	ENSTTRG00000016715	SNRNP48	85	93.031	Tursiops_truncatus
ENSPTIG00000013502	SNRNP48	100	96.167	ENSUAMG00000003690	SNRNP48	85	96.167	Ursus_americanus
ENSPTIG00000013502	SNRNP48	100	89.895	ENSVPAG00000003557	SNRNP48	100	89.895	Vicugna_pacos
ENSPTIG00000013502	SNRNP48	100	96.167	ENSVVUG00000004996	SNRNP48	84	96.167	Vulpes_vulpes
ENSPTIG00000013502	SNRNP48	87	56.322	ENSXETG00000020447	snrnp48	87	52.824	Xenopus_tropicalis
ENSPTIG00000013502	SNRNP48	64	52.973	ENSXCOG00000004478	snrnp48	58	52.105	Xiphophorus_couchianus
ENSPTIG00000013502	SNRNP48	81	50.855	ENSXMAG00000013595	snrnp48	71	44.755	Xiphophorus_maculatus