EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000013539 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 5978 bases
Position: chrKE722261.1:3007348-3013325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000013981	zf-C2H2	PF00096.26	5.2e-32	1	5
ENSPTIP00000013981	zf-C2H2	PF00096.26	5.2e-32	2	5
ENSPTIP00000013981	zf-C2H2	PF00096.26	5.2e-32	3	5
ENSPTIP00000013981	zf-C2H2	PF00096.26	5.2e-32	4	5
ENSPTIP00000013981	zf-C2H2	PF00096.26	5.2e-32	5	5
ENSPTIP00000013981	zf-met	PF12874.7	3.8e-24	1	5
ENSPTIP00000013981	zf-met	PF12874.7	3.8e-24	2	5
ENSPTIP00000013981	zf-met	PF12874.7	3.8e-24	3	5
ENSPTIP00000013981	zf-met	PF12874.7	3.8e-24	4	5
ENSPTIP00000013981	zf-met	PF12874.7	3.8e-24	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000018059	-	3159	-	ENSPTIP00000013981	1052 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000013539's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000013539's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000013539	-	51	42.553	ENSPTIG00000008348	ZNF423	61	42.553
ENSPTIG00000013539	-	60	46.512	ENSPTIG00000009517	-	98	46.512
ENSPTIG00000013539	-	66	53.061	ENSPTIG00000011566	ZNF236	69	53.061
ENSPTIG00000013539	-	60	46.512	ENSPTIG00000009156	ZNF770	98	46.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000013539	-	96	96.000	ENSG00000103449	SALL1	88	96.000	Homo_sapiens
ENSPTIG00000013539	-	94	71.887	ENSAPOG00000022764	sall1a	87	72.180	Acanthochromis_polyacanthus
ENSPTIG00000013539	-	96	96.571	ENSAMEG00000006817	SALL1	83	96.571	Ailuropoda_melanoleuca
ENSPTIG00000013539	-	94	68.807	ENSACIG00000004231	sall1a	87	68.921	Amphilophus_citrinellus
ENSPTIG00000013539	-	94	72.264	ENSAOCG00000002800	sall1a	87	72.556	Amphiprion_ocellaris
ENSPTIG00000013539	-	94	72.264	ENSAPEG00000010179	sall1a	87	72.556	Amphiprion_percula
ENSPTIG00000013539	-	96	57.895	ENSATEG00000003006	sall1a	89	56.799	Anabas_testudineus
ENSPTIG00000013539	-	95	90.613	ENSAPLG00000003356	SALL1	88	72.711	Anas_platyrhynchos
ENSPTIG00000013539	-	95	86.616	ENSACAG00000014399	SALL1	79	86.616	Anolis_carolinensis
ENSPTIG00000013539	-	96	96.571	ENSANAG00000027238	SALL1	83	96.571	Aotus_nancymaae
ENSPTIG00000013539	-	94	68.991	ENSACLG00000017148	sall1a	89	69.646	Astatotilapia_calliptera
ENSPTIG00000013539	-	94	63.462	ENSAMXG00000017702	sall1b	74	66.854	Astyanax_mexicanus
ENSPTIG00000013539	-	96	63.462	ENSAMXG00000018599	sall1a	87	63.462	Astyanax_mexicanus
ENSPTIG00000013539	-	96	95.810	ENSBTAG00000008544	SALL1	83	95.810	Bos_taurus
ENSPTIG00000013539	-	96	88.718	ENSCJAG00000001740	SALL1	87	88.718	Callithrix_jacchus
ENSPTIG00000013539	-	95	95.714	ENSCAFG00000009755	SALL1	83	97.143	Canis_familiaris
ENSPTIG00000013539	-	84	97.143	ENSCAFG00020002842	SALL1	83	97.143	Canis_lupus_dingo
ENSPTIG00000013539	-	96	93.692	ENSCHIG00000026074	SALL1	85	93.692	Capra_hircus
ENSPTIG00000013539	-	96	96.374	ENSTSYG00000029464	SALL1	83	96.374	Carlito_syrichta
ENSPTIG00000013539	-	95	95.429	ENSCPOG00000006564	SALL1	84	95.429	Cavia_porcellus
ENSPTIG00000013539	-	96	95.810	ENSCCAG00000001639	SALL1	83	95.810	Cebus_capucinus
ENSPTIG00000013539	-	96	96.190	ENSCATG00000004982	SALL1	83	96.190	Cercocebus_atys
ENSPTIG00000013539	-	96	95.238	ENSCLAG00000006380	SALL1	83	95.238	Chinchilla_lanigera
ENSPTIG00000013539	-	96	95.810	ENSCSAG00000005319	SALL1	81	95.810	Chlorocebus_sabaeus
ENSPTIG00000013539	-	72	91.700	ENSCHOG00000000800	-	67	91.700	Choloepus_hoffmanni
ENSPTIG00000013539	-	95	71.856	ENSCPBG00000015924	SALL1	93	71.919	Chrysemys_picta_bellii
ENSPTIG00000013539	-	96	96.190	ENSCANG00000036664	SALL1	88	88.547	Colobus_angolensis_palliatus
ENSPTIG00000013539	-	96	94.636	ENSCGRG00001023314	-	83	94.636	Cricetulus_griseus_chok1gshd
ENSPTIG00000013539	-	95	94.636	ENSCGRG00000009496	Sall1	85	94.636	Cricetulus_griseus_crigri
ENSPTIG00000013539	-	94	70.169	ENSCSEG00000009349	sall1a	81	81.143	Cynoglossus_semilaevis
ENSPTIG00000013539	-	94	71.078	ENSCVAG00000020513	sall1a	88	71.053	Cyprinodon_variegatus
ENSPTIG00000013539	-	94	72.575	ENSDARG00000074319	sall1a	89	79.429	Danio_rerio
ENSPTIG00000013539	-	94	52.308	ENSDARG00000075891	sall1b	83	65.385	Danio_rerio
ENSPTIG00000013539	-	96	92.897	ENSDNOG00000016413	SALL1	83	92.897	Dasypus_novemcinctus
ENSPTIG00000013539	-	95	93.714	ENSETEG00000015150	SALL1	84	93.714	Echinops_telfairi
ENSPTIG00000013539	-	61	65.957	ENSEBUG00000008798	SALL1	58	65.957	Eptatretus_burgeri
ENSPTIG00000013539	-	77	65.306	ENSEBUG00000011732	SALL1	85	65.306	Eptatretus_burgeri
ENSPTIG00000013539	-	96	96.190	ENSEASG00005014602	SALL1	83	96.190	Equus_asinus_asinus
ENSPTIG00000013539	-	97	95.149	ENSECAG00000011334	SALL1	91	95.149	Equus_caballus
ENSPTIG00000013539	-	95	95.038	ENSEEUG00000002014	SALL1	84	95.038	Erinaceus_europaeus
ENSPTIG00000013539	-	94	67.179	ENSELUG00000006159	sall1a	67	66.838	Esox_lucius
ENSPTIG00000013539	-	94	64.151	ENSELUG00000017774	-	75	74.713	Esox_lucius
ENSPTIG00000013539	-	96	97.579	ENSFCAG00000024654	SALL1	84	97.579	Felis_catus
ENSPTIG00000013539	-	95	89.464	ENSFALG00000000074	SALL1	88	71.743	Ficedula_albicollis
ENSPTIG00000013539	-	94	71.078	ENSFHEG00000012579	sall1a	80	71.053	Fundulus_heteroclitus
ENSPTIG00000013539	-	86	74.096	ENSFHEG00000008424	-	72	74.251	Fundulus_heteroclitus
ENSPTIG00000013539	-	94	70.037	ENSGMOG00000006103	sall1a	81	80.571	Gadus_morhua
ENSPTIG00000013539	-	94	65.957	ENSGMOG00000013383	-	74	69.714	Gadus_morhua
ENSPTIG00000013539	-	95	72.120	ENSGALG00000039238	SALL1	88	72.183	Gallus_gallus
ENSPTIG00000013539	-	94	71.267	ENSGAFG00000009964	sall1a	80	71.241	Gambusia_affinis
ENSPTIG00000013539	-	94	69.811	ENSGACG00000016702	sall1a	80	69.794	Gasterosteus_aculeatus
ENSPTIG00000013539	-	96	71.266	ENSGAGG00000013979	SALL1	89	71.134	Gopherus_agassizii
ENSPTIG00000013539	-	96	96.190	ENSGGOG00000000663	SALL1	83	96.190	Gorilla_gorilla
ENSPTIG00000013539	-	94	69.174	ENSHBUG00000022005	sall1a	89	69.832	Haplochromis_burtoni
ENSPTIG00000013539	-	96	95.048	ENSHGLG00000004288	-	83	95.048	Heterocephalus_glaber_female
ENSPTIG00000013539	-	96	95.048	ENSHGLG00100017496	SALL1	83	95.048	Heterocephalus_glaber_male
ENSPTIG00000013539	-	94	70.377	ENSHCOG00000000974	sall1a	84	75.258	Hippocampus_comes
ENSPTIG00000013539	-	95	61.702	ENSIPUG00000022928	sall1b	68	69.591	Ictalurus_punctatus
ENSPTIG00000013539	-	94	57.918	ENSIPUG00000016265	SALL1	87	75.000	Ictalurus_punctatus
ENSPTIG00000013539	-	96	94.837	ENSSTOG00000020885	SALL1	83	94.487	Ictidomys_tridecemlineatus
ENSPTIG00000013539	-	94	71.834	ENSKMAG00000016681	sall1a	87	71.617	Kryptolebias_marmoratus
ENSPTIG00000013539	-	94	71.053	ENSLBEG00000012207	sall1a	85	68.609	Labrus_bergylta
ENSPTIG00000013539	-	94	61.538	ENSLACG00000014018	-	79	61.538	Latimeria_chalumnae
ENSPTIG00000013539	-	95	84.291	ENSLACG00000003556	SALL1	80	84.291	Latimeria_chalumnae
ENSPTIG00000013539	-	95	78.195	ENSLOCG00000007283	sall1b	54	84.571	Lepisosteus_oculatus
ENSPTIG00000013539	-	95	94.667	ENSLAFG00000015251	SALL1	84	94.667	Loxodonta_africana
ENSPTIG00000013539	-	96	96.000	ENSMFAG00000003298	SALL1	83	96.000	Macaca_fascicularis
ENSPTIG00000013539	-	89	96.000	ENSMMUG00000017200	SALL1	83	96.000	Macaca_mulatta
ENSPTIG00000013539	-	89	96.000	ENSMNEG00000034770	SALL1	83	96.000	Macaca_nemestrina
ENSPTIG00000013539	-	96	96.190	ENSMLEG00000036406	SALL1	83	96.190	Mandrillus_leucophaeus
ENSPTIG00000013539	-	94	70.865	ENSMAMG00000004164	sall1a	66	81.714	Mastacembelus_armatus
ENSPTIG00000013539	-	94	68.991	ENSMZEG00005006479	sall1a	89	69.646	Maylandia_zebra
ENSPTIG00000013539	-	95	72.296	ENSMGAG00000004704	SALL1	89	72.359	Meleagris_gallopavo
ENSPTIG00000013539	-	96	93.487	ENSMAUG00000019093	Sall1	86	93.487	Mesocricetus_auratus
ENSPTIG00000013539	-	96	96.000	ENSMICG00000036486	SALL1	83	96.000	Microcebus_murinus
ENSPTIG00000013539	-	94	71.456	ENSMMOG00000016400	sall1a	87	71.429	Mola_mola
ENSPTIG00000013539	-	95	86.783	ENSMODG00000013114	SALL1	86	86.783	Monodelphis_domestica
ENSPTIG00000013539	-	96	71.267	ENSMALG00000013400	sall1a	89	71.429	Monopterus_albus
ENSPTIG00000013539	-	96	95.619	MGP_CAROLIEiJ_G0031362	Sall1	84	95.619	Mus_caroli
ENSPTIG00000013539	-	96	95.429	ENSMUSG00000031665	Sall1	84	95.429	Mus_musculus
ENSPTIG00000013539	-	96	94.667	MGP_PahariEiJ_G0022961	Sall1	84	94.667	Mus_pahari
ENSPTIG00000013539	-	96	95.238	MGP_SPRETEiJ_G0032480	Sall1	84	95.238	Mus_spretus
ENSPTIG00000013539	-	95	96.762	ENSMPUG00000003265	SALL1	80	96.762	Mustela_putorius_furo
ENSPTIG00000013539	-	96	89.905	ENSMLUG00000015541	SALL1	84	89.642	Myotis_lucifugus
ENSPTIG00000013539	-	94	69.174	ENSNBRG00000009307	sall1a	89	69.832	Neolamprologus_brichardi
ENSPTIG00000013539	-	96	100.000	ENSNLEG00000001008	SALL1	83	100.000	Nomascus_leucogenys
ENSPTIG00000013539	-	95	91.028	ENSMEUG00000012206	SALL1	83	91.028	Notamacropus_eugenii
ENSPTIG00000013539	-	83	93.117	ENSOPRG00000005645	SALL1	62	93.117	Ochotona_princeps
ENSPTIG00000013539	-	96	95.429	ENSODEG00000003685	SALL1	83	95.429	Octodon_degus
ENSPTIG00000013539	-	94	69.835	ENSONIG00000002831	sall1a	96	69.818	Oreochromis_niloticus
ENSPTIG00000013539	-	85	85.000	ENSOANG00000013399	SALL1	84	85.000	Ornithorhynchus_anatinus
ENSPTIG00000013539	-	94	71.078	ENSORLG00000013827	sall1a	84	71.053	Oryzias_latipes
ENSPTIG00000013539	-	94	70.888	ENSORLG00020020570	sall1a	87	63.462	Oryzias_latipes_hni
ENSPTIG00000013539	-	94	70.888	ENSORLG00015018830	sall1a	87	70.677	Oryzias_latipes_hsok
ENSPTIG00000013539	-	94	71.078	ENSOMEG00000016043	sall1a	89	71.053	Oryzias_melastigma
ENSPTIG00000013539	-	96	91.681	ENSOGAG00000027316	SALL1	86	91.681	Otolemur_garnettii
ENSPTIG00000013539	-	96	74.977	ENSOARG00000017583	SALL1	84	75.484	Ovis_aries
ENSPTIG00000013539	-	95	61.167	ENSPPAG00000035136	-	88	61.167	Pan_paniscus
ENSPTIG00000013539	-	96	96.000	ENSPPAG00000035657	SALL1	84	96.000	Pan_paniscus
ENSPTIG00000013539	-	96	97.952	ENSPPRG00000023283	SALL1	84	97.952	Panthera_pardus
ENSPTIG00000013539	-	95	61.426	ENSPTRG00000045256	-	89	61.258	Pan_troglodytes
ENSPTIG00000013539	-	96	96.000	ENSPTRG00000008108	SALL1	83	96.000	Pan_troglodytes
ENSPTIG00000013539	-	96	96.190	ENSPANG00000024176	SALL1	83	96.190	Papio_anubis
ENSPTIG00000013539	-	94	71.863	ENSPKIG00000022251	sall1a	66	72.053	Paramormyrops_kingsleyae
ENSPTIG00000013539	-	94	72.917	ENSPKIG00000005383	-	73	76.571	Paramormyrops_kingsleyae
ENSPTIG00000013539	-	95	72.159	ENSPSIG00000008582	SALL1	88	71.982	Pelodiscus_sinensis
ENSPTIG00000013539	-	94	71.321	ENSPMGG00000021788	sall1a	81	81.356	Periophthalmus_magnuspinnatus
ENSPTIG00000013539	-	94	65.957	ENSPMAG00000008148	sall1b	71	73.684	Petromyzon_marinus
ENSPTIG00000013539	-	95	91.402	ENSPCIG00000017840	SALL1	83	91.402	Phascolarctos_cinereus
ENSPTIG00000013539	-	94	71.078	ENSPFOG00000015799	sall1a	78	71.241	Poecilia_formosa
ENSPTIG00000013539	-	94	71.078	ENSPLAG00000022539	sall1a	80	71.241	Poecilia_latipinna
ENSPTIG00000013539	-	94	71.456	ENSPMEG00000020894	sall1a	80	71.429	Poecilia_mexicana
ENSPTIG00000013539	-	94	58.084	ENSPREG00000006802	sall1a	89	63.171	Poecilia_reticulata
ENSPTIG00000013539	-	96	95.849	ENSPPYG00000007345	SALL1	87	95.849	Pongo_abelii
ENSPTIG00000013539	-	90	95.038	ENSPCAG00000008162	SALL1	83	95.038	Procavia_capensis
ENSPTIG00000013539	-	96	96.190	ENSPCOG00000028192	SALL1	83	96.190	Propithecus_coquereli
ENSPTIG00000013539	-	61	97.647	ENSPVAG00000015374	SALL1	76	94.667	Pteropus_vampyrus
ENSPTIG00000013539	-	94	69.174	ENSPNYG00000010865	sall1a	89	69.832	Pundamilia_nyererei
ENSPTIG00000013539	-	84	70.968	ENSPNAG00000028248	-	71	72.571	Pygocentrus_nattereri
ENSPTIG00000013539	-	94	63.462	ENSPNAG00000007442	sall1b	74	65.746	Pygocentrus_nattereri
ENSPTIG00000013539	-	94	63.462	ENSPNAG00000023644	sall1a	81	66.882	Pygocentrus_nattereri
ENSPTIG00000013539	-	96	94.697	ENSRNOG00000013907	Sall1	84	94.697	Rattus_norvegicus
ENSPTIG00000013539	-	89	96.190	ENSRBIG00000015707	SALL1	83	96.190	Rhinopithecus_bieti
ENSPTIG00000013539	-	96	96.190	ENSRROG00000035777	SALL1	84	96.190	Rhinopithecus_roxellana
ENSPTIG00000013539	-	96	96.571	ENSSBOG00000032186	SALL1	83	96.571	Saimiri_boliviensis_boliviensis
ENSPTIG00000013539	-	95	92.337	ENSSHAG00000009477	SALL1	84	92.337	Sarcophilus_harrisii
ENSPTIG00000013539	-	95	74.144	ENSSFOG00015001590	sall1a	54	81.143	Scleropages_formosus
ENSPTIG00000013539	-	94	73.004	ENSSFOG00015020020	sall1a	86	81.714	Scleropages_formosus
ENSPTIG00000013539	-	94	63.462	ENSSMAG00000009160	sall1a	87	63.462	Scophthalmus_maximus
ENSPTIG00000013539	-	94	56.250	ENSSDUG00000000748	sall1b	65	56.250	Seriola_dumerili
ENSPTIG00000013539	-	94	72.212	ENSSDUG00000006507	sall1a	89	72.180	Seriola_dumerili
ENSPTIG00000013539	-	58	71.277	ENSSLDG00000014465	-	87	71.277	Seriola_lalandi_dorsalis
ENSPTIG00000013539	-	94	72.401	ENSSLDG00000017721	sall1a	87	72.368	Seriola_lalandi_dorsalis
ENSPTIG00000013539	-	95	95.611	ENSSARG00000000661	SALL1	84	95.611	Sorex_araneus
ENSPTIG00000013539	-	95	70.976	ENSSPUG00000000156	SALL1	88	71.039	Sphenodon_punctatus
ENSPTIG00000013539	-	94	70.577	ENSSPAG00000021615	sall1a	87	70.872	Stegastes_partitus
ENSPTIG00000013539	-	84	95.627	ENSSSCG00000002836	SALL1	89	95.627	Sus_scrofa
ENSPTIG00000013539	-	95	72.208	ENSTGUG00000007514	SALL1	88	72.447	Taeniopygia_guttata
ENSPTIG00000013539	-	96	70.321	ENSTRUG00000008950	sall1a	90	83.429	Takifugu_rubripes
ENSPTIG00000013539	-	96	70.019	ENSTNIG00000004257	sall1a	96	70.000	Tetraodon_nigroviridis
ENSPTIG00000013539	-	96	96.805	ENSUAMG00000023379	-	85	96.805	Ursus_americanus
ENSPTIG00000013539	-	97	96.648	ENSVVUG00000019383	-	78	96.648	Vulpes_vulpes
ENSPTIG00000013539	-	76	60.784	ENSXETG00000017176	sall2	74	60.784	Xenopus_tropicalis
ENSPTIG00000013539	-	96	66.374	ENSXETG00000018417	sall1	86	66.286	Xenopus_tropicalis
ENSPTIG00000013539	-	94	71.078	ENSXMAG00000016273	sall1a	80	71.053	Xiphophorus_maculatus