EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000014214 (Gene tree)
Gene ID: 102965229
Gene Symbol: SND1
Alias: -
Full Name: staphylococcal nuclease and tudor domain containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 422879 bases
Position: chrKE721913.1:2329351-2752229
Accession: 102965229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000014961	TUDOR	PF00567.24	3e-27	1	1
ENSPTIP00000014971	TUDOR	PF00567.24	3.1e-27	1	1
ENSPTIP00000014971	SNase	PF00565.17	1.2e-69	1	5
ENSPTIP00000014971	SNase	PF00565.17	1.2e-69	2	5
ENSPTIP00000014971	SNase	PF00565.17	1.2e-69	3	5
ENSPTIP00000014971	SNase	PF00565.17	1.2e-69	4	5
ENSPTIP00000014971	SNase	PF00565.17	1.2e-69	5	5
ENSPTIP00000014961	SNase	PF00565.17	4.2e-67	1	4
ENSPTIP00000014961	SNase	PF00565.17	4.2e-67	2	4
ENSPTIP00000014961	SNase	PF00565.17	4.2e-67	3	4
ENSPTIP00000014961	SNase	PF00565.17	4.2e-67	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000019092	SND1-202	3485	XM_007089922	ENSPTIP00000014971	910 (aa)	XP_007089984	UPI00042BE9E1
ENSPTIT00000019082	SND1-201	3748	-	ENSPTIP00000014961	905 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000014214's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000014214's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000014214	SND1	100	98.901	ENSG00000197157	SND1	100	98.901	Homo_sapiens
ENSPTIG00000014214	SND1	100	83.772	ENSAPOG00000017599	snd1	100	83.772	Acanthochromis_polyacanthus
ENSPTIG00000014214	SND1	100	99.013	ENSAMEG00000004664	SND1	94	99.013	Ailuropoda_melanoleuca
ENSPTIG00000014214	SND1	98	81.971	ENSACIG00000003551	snd1	100	81.010	Amphilophus_citrinellus
ENSPTIG00000014214	SND1	100	83.553	ENSAOCG00000014166	snd1	100	83.553	Amphiprion_ocellaris
ENSPTIG00000014214	SND1	100	83.553	ENSAPEG00000007067	snd1	100	83.553	Amphiprion_percula
ENSPTIG00000014214	SND1	99	83.110	ENSATEG00000018475	snd1	89	83.110	Anabas_testudineus
ENSPTIG00000014214	SND1	100	99.121	ENSANAG00000034463	SND1	100	99.121	Aotus_nancymaae
ENSPTIG00000014214	SND1	100	83.224	ENSACLG00000022897	snd1	100	83.224	Astatotilapia_calliptera
ENSPTIG00000014214	SND1	99	84.488	ENSAMXG00000016318	snd1	99	84.488	Astyanax_mexicanus
ENSPTIG00000014214	SND1	100	98.681	ENSBTAG00000010692	SND1	100	98.681	Bos_taurus
ENSPTIG00000014214	SND1	98	47.091	WBGene00006626	tsn-1	98	47.530	Caenorhabditis_elegans
ENSPTIG00000014214	SND1	100	98.901	ENSCJAG00000017668	SND1	100	98.901	Callithrix_jacchus
ENSPTIG00000014214	SND1	100	99.341	ENSCAFG00000001700	SND1	100	99.341	Canis_familiaris
ENSPTIG00000014214	SND1	100	99.341	ENSCAFG00020021639	SND1	100	99.341	Canis_lupus_dingo
ENSPTIG00000014214	SND1	100	99.011	ENSCHIG00000023390	SND1	100	99.011	Capra_hircus
ENSPTIG00000014214	SND1	73	99.472	ENSTSYG00000004979	SND1	96	99.472	Carlito_syrichta
ENSPTIG00000014214	SND1	99	84.667	ENSCAPG00000010677	SND1	98	84.667	Cavia_aperea
ENSPTIG00000014214	SND1	100	97.912	ENSCPOG00000006251	SND1	100	97.912	Cavia_porcellus
ENSPTIG00000014214	SND1	100	99.231	ENSCCAG00000036847	SND1	100	99.231	Cebus_capucinus
ENSPTIG00000014214	SND1	100	99.121	ENSCATG00000035214	SND1	100	99.121	Cercocebus_atys
ENSPTIG00000014214	SND1	100	98.132	ENSCLAG00000011796	SND1	100	98.132	Chinchilla_lanigera
ENSPTIG00000014214	SND1	100	99.121	ENSCSAG00000010182	SND1	100	99.121	Chlorocebus_sabaeus
ENSPTIG00000014214	SND1	78	89.216	ENSCHOG00000002218	SND1	86	89.216	Choloepus_hoffmanni
ENSPTIG00000014214	SND1	100	92.418	ENSCPBG00000018094	SND1	100	92.418	Chrysemys_picta_bellii
ENSPTIG00000014214	SND1	98	57.032	ENSCING00000000524	-	99	56.352	Ciona_intestinalis
ENSPTIG00000014214	SND1	99	57.906	ENSCSAVG00000008807	-	99	57.906	Ciona_savignyi
ENSPTIG00000014214	SND1	100	99.121	ENSCANG00000035119	SND1	100	99.121	Colobus_angolensis_palliatus
ENSPTIG00000014214	SND1	100	97.143	ENSCGRG00001022514	Snd1	100	97.143	Cricetulus_griseus_chok1gshd
ENSPTIG00000014214	SND1	97	97.285	ENSCGRG00000012277	Snd1	99	97.285	Cricetulus_griseus_crigri
ENSPTIG00000014214	SND1	100	82.785	ENSCSEG00000008661	snd1	99	82.785	Cynoglossus_semilaevis
ENSPTIG00000014214	SND1	100	83.882	ENSCVAG00000010316	snd1	100	83.563	Cyprinodon_variegatus
ENSPTIG00000014214	SND1	100	84.447	ENSDARG00000006766	snd1	99	86.140	Danio_rerio
ENSPTIG00000014214	SND1	97	96.167	ENSDNOG00000006795	SND1	100	96.167	Dasypus_novemcinctus
ENSPTIG00000014214	SND1	100	98.571	ENSDORG00000000336	Snd1	100	98.571	Dipodomys_ordii
ENSPTIG00000014214	SND1	98	50.595	FBgn0035121	Tudor-SN	99	50.106	Drosophila_melanogaster
ENSPTIG00000014214	SND1	90	100.000	ENSETEG00000000375	SND1	92	100.000	Echinops_telfairi
ENSPTIG00000014214	SND1	61	67.568	ENSEBUG00000014201	-	84	75.956	Eptatretus_burgeri
ENSPTIG00000014214	SND1	99	99.105	ENSEASG00005008513	SND1	100	97.516	Equus_asinus_asinus
ENSPTIG00000014214	SND1	100	99.121	ENSECAG00000011451	SND1	100	99.121	Equus_caballus
ENSPTIG00000014214	SND1	100	86.813	ENSEEUG00000014737	SND1	100	86.813	Erinaceus_europaeus
ENSPTIG00000014214	SND1	99	82.127	ENSELUG00000001805	snd1	96	82.127	Esox_lucius
ENSPTIG00000014214	SND1	100	99.890	ENSFCAG00000008289	SND1	100	99.890	Felis_catus
ENSPTIG00000014214	SND1	100	98.242	ENSFDAG00000015881	SND1	100	98.242	Fukomys_damarensis
ENSPTIG00000014214	SND1	99	81.985	ENSFHEG00000004093	snd1	99	83.697	Fundulus_heteroclitus
ENSPTIG00000014214	SND1	64	74.011	ENSGMOG00000018932	snd1	66	74.011	Gadus_morhua
ENSPTIG00000014214	SND1	100	84.211	ENSGAFG00000008421	snd1	100	84.211	Gambusia_affinis
ENSPTIG00000014214	SND1	100	53.855	ENSGACG00000019793	snd1	100	53.855	Gasterosteus_aculeatus
ENSPTIG00000014214	SND1	100	99.121	ENSGGOG00000009614	SND1	100	99.121	Gorilla_gorilla
ENSPTIG00000014214	SND1	99	83.260	ENSHBUG00000019135	snd1	99	83.260	Haplochromis_burtoni
ENSPTIG00000014214	SND1	100	97.912	ENSHGLG00000003618	SND1	100	97.912	Heterocephalus_glaber_female
ENSPTIG00000014214	SND1	99	97.459	ENSHGLG00100012449	SND1	100	97.459	Heterocephalus_glaber_male
ENSPTIG00000014214	SND1	100	82.675	ENSHCOG00000005266	snd1	100	82.675	Hippocampus_comes
ENSPTIG00000014214	SND1	100	82.932	ENSIPUG00000013279	snd1	100	82.932	Ictalurus_punctatus
ENSPTIG00000014214	SND1	100	98.571	ENSSTOG00000002140	SND1	100	98.571	Ictidomys_tridecemlineatus
ENSPTIG00000014214	SND1	100	98.791	ENSJJAG00000009561	Snd1	100	98.791	Jaculus_jaculus
ENSPTIG00000014214	SND1	100	83.991	ENSKMAG00000016997	snd1	100	83.991	Kryptolebias_marmoratus
ENSPTIG00000014214	SND1	100	84.899	ENSLBEG00000013563	snd1	100	82.456	Labrus_bergylta
ENSPTIG00000014214	SND1	99	85.336	ENSLOCG00000015537	snd1	100	84.582	Lepisosteus_oculatus
ENSPTIG00000014214	SND1	100	98.132	ENSLAFG00000009696	SND1	100	98.132	Loxodonta_africana
ENSPTIG00000014214	SND1	100	99.121	ENSMFAG00000038114	SND1	100	99.121	Macaca_fascicularis
ENSPTIG00000014214	SND1	100	99.121	ENSMMUG00000015432	SND1	100	99.121	Macaca_mulatta
ENSPTIG00000014214	SND1	100	99.121	ENSMNEG00000039808	SND1	100	99.209	Macaca_nemestrina
ENSPTIG00000014214	SND1	100	99.011	ENSMLEG00000029040	SND1	100	99.096	Mandrillus_leucophaeus
ENSPTIG00000014214	SND1	100	83.333	ENSMAMG00000011739	snd1	100	83.333	Mastacembelus_armatus
ENSPTIG00000014214	SND1	100	83.224	ENSMZEG00005005681	snd1	100	83.224	Maylandia_zebra
ENSPTIG00000014214	SND1	100	98.901	ENSMICG00000000097	SND1	100	98.901	Microcebus_murinus
ENSPTIG00000014214	SND1	100	98.022	ENSMOCG00000005040	Snd1	100	98.022	Microtus_ochrogaster
ENSPTIG00000014214	SND1	100	83.333	ENSMMOG00000001795	snd1	100	83.333	Mola_mola
ENSPTIG00000014214	SND1	99	95.875	ENSMODG00000015182	SND1	100	95.824	Monodelphis_domestica
ENSPTIG00000014214	SND1	100	83.224	ENSMALG00000012071	snd1	100	83.224	Monopterus_albus
ENSPTIG00000014214	SND1	100	97.582	MGP_CAROLIEiJ_G0028159	Snd1	100	97.582	Mus_caroli
ENSPTIG00000014214	SND1	100	97.363	ENSMUSG00000001424	Snd1	100	97.363	Mus_musculus
ENSPTIG00000014214	SND1	100	97.582	MGP_PahariEiJ_G0021917	Snd1	100	98.314	Mus_pahari
ENSPTIG00000014214	SND1	100	97.582	MGP_SPRETEiJ_G0029159	Snd1	100	97.582	Mus_spretus
ENSPTIG00000014214	SND1	100	98.791	ENSMPUG00000006545	SND1	100	98.791	Mustela_putorius_furo
ENSPTIG00000014214	SND1	97	97.318	ENSMLUG00000017130	SND1	99	97.318	Myotis_lucifugus
ENSPTIG00000014214	SND1	100	97.912	ENSNGAG00000011186	Snd1	100	97.912	Nannospalax_galili
ENSPTIG00000014214	SND1	100	83.114	ENSNBRG00000006681	snd1	100	83.114	Neolamprologus_brichardi
ENSPTIG00000014214	SND1	100	99.011	ENSNLEG00000012263	SND1	100	99.209	Nomascus_leucogenys
ENSPTIG00000014214	SND1	91	100.000	ENSOPRG00000013405	SND1	92	100.000	Ochotona_princeps
ENSPTIG00000014214	SND1	100	98.352	ENSODEG00000011502	SND1	100	98.352	Octodon_degus
ENSPTIG00000014214	SND1	100	83.114	ENSONIG00000011481	snd1	97	83.114	Oreochromis_niloticus
ENSPTIG00000014214	SND1	98	94.595	ENSOANG00000000817	SND1	99	93.392	Ornithorhynchus_anatinus
ENSPTIG00000014214	SND1	100	97.473	ENSOCUG00000001620	SND1	100	97.473	Oryctolagus_cuniculus
ENSPTIG00000014214	SND1	98	83.799	ENSORLG00000015201	snd1	100	82.785	Oryzias_latipes
ENSPTIG00000014214	SND1	98	83.911	ENSORLG00020013991	snd1	100	82.895	Oryzias_latipes_hni
ENSPTIG00000014214	SND1	98	83.911	ENSORLG00015012436	snd1	100	82.895	Oryzias_latipes_hsok
ENSPTIG00000014214	SND1	100	83.004	ENSOMEG00000006406	snd1	99	83.004	Oryzias_melastigma
ENSPTIG00000014214	SND1	100	98.684	ENSOGAG00000013356	SND1	94	98.684	Otolemur_garnettii
ENSPTIG00000014214	SND1	97	96.158	ENSOARG00000002149	SND1	100	96.158	Ovis_aries
ENSPTIG00000014214	SND1	100	99.011	ENSPPAG00000042947	SND1	100	99.011	Pan_paniscus
ENSPTIG00000014214	SND1	100	99.890	ENSPPRG00000004494	SND1	100	99.890	Panthera_pardus
ENSPTIG00000014214	SND1	100	99.011	ENSPTRG00000023911	SND1	100	99.011	Pan_troglodytes
ENSPTIG00000014214	SND1	97	99.208	ENSPANG00000011997	SND1	99	99.208	Papio_anubis
ENSPTIG00000014214	SND1	99	81.477	ENSPKIG00000023494	snd1	100	80.740	Paramormyrops_kingsleyae
ENSPTIG00000014214	SND1	92	82.874	ENSPMGG00000003629	snd1	100	82.874	Periophthalmus_magnuspinnatus
ENSPTIG00000014214	SND1	100	97.912	ENSPEMG00000010240	Snd1	100	97.912	Peromyscus_maniculatus_bairdii
ENSPTIG00000014214	SND1	97	73.446	ENSPMAG00000007915	-	99	73.446	Petromyzon_marinus
ENSPTIG00000014214	SND1	100	96.264	ENSPCIG00000011561	SND1	100	96.264	Phascolarctos_cinereus
ENSPTIG00000014214	SND1	100	83.662	ENSPFOG00000001557	snd1	100	83.662	Poecilia_formosa
ENSPTIG00000014214	SND1	100	83.662	ENSPLAG00000018459	snd1	97	83.662	Poecilia_latipinna
ENSPTIG00000014214	SND1	100	84.101	ENSPMEG00000006803	snd1	100	84.101	Poecilia_mexicana
ENSPTIG00000014214	SND1	100	83.991	ENSPREG00000002189	snd1	100	83.991	Poecilia_reticulata
ENSPTIG00000014214	SND1	93	98.883	ENSPPYG00000017972	SND1	100	98.883	Pongo_abelii
ENSPTIG00000014214	SND1	100	86.484	ENSPCAG00000011305	SND1	100	86.484	Procavia_capensis
ENSPTIG00000014214	SND1	100	98.901	ENSPCOG00000026791	SND1	100	98.983	Propithecus_coquereli
ENSPTIG00000014214	SND1	100	97.033	ENSPVAG00000013945	SND1	100	97.033	Pteropus_vampyrus
ENSPTIG00000014214	SND1	100	83.224	ENSPNYG00000000932	snd1	100	83.224	Pundamilia_nyererei
ENSPTIG00000014214	SND1	100	83.698	ENSPNAG00000001206	snd1	100	83.698	Pygocentrus_nattereri
ENSPTIG00000014214	SND1	99	97.247	ENSRNOG00000031173	Snd1	99	97.247	Rattus_norvegicus
ENSPTIG00000014214	SND1	73	99.810	ENSRBIG00000027782	-	93	99.810	Rhinopithecus_bieti
ENSPTIG00000014214	SND1	100	99.121	ENSRROG00000033020	SND1	100	99.121	Rhinopithecus_roxellana
ENSPTIG00000014214	SND1	100	99.121	ENSSBOG00000032461	SND1	100	99.121	Saimiri_boliviensis_boliviensis
ENSPTIG00000014214	SND1	98	92.905	ENSSHAG00000015359	SND1	100	92.905	Sarcophilus_harrisii
ENSPTIG00000014214	SND1	100	82.263	ENSSFOG00015001103	snd1	100	82.263	Scleropages_formosus
ENSPTIG00000014214	SND1	98	83.557	ENSSMAG00000001932	snd1	95	82.456	Scophthalmus_maximus
ENSPTIG00000014214	SND1	100	83.553	ENSSDUG00000002699	snd1	94	83.553	Seriola_dumerili
ENSPTIG00000014214	SND1	100	76.316	ENSSLDG00000001950	snd1	100	76.316	Seriola_lalandi_dorsalis
ENSPTIG00000014214	SND1	87	99.057	ENSSARG00000004877	SND1	92	99.057	Sorex_araneus
ENSPTIG00000014214	SND1	73	87.826	ENSSPUG00000017586	SND1	96	87.826	Sphenodon_punctatus
ENSPTIG00000014214	SND1	75	85.110	ENSSPAG00000021398	snd1	99	85.110	Stegastes_partitus
ENSPTIG00000014214	SND1	100	98.901	ENSSSCG00000016590	SND1	100	98.901	Sus_scrofa
ENSPTIG00000014214	SND1	100	82.566	ENSTRUG00000014067	snd1	100	82.566	Takifugu_rubripes
ENSPTIG00000014214	SND1	100	83.333	ENSTNIG00000011019	snd1	98	85.762	Tetraodon_nigroviridis
ENSPTIG00000014214	SND1	94	93.160	ENSTBEG00000003999	SND1	100	93.160	Tupaia_belangeri
ENSPTIG00000014214	SND1	100	94.286	ENSTTRG00000006059	SND1	100	94.286	Tursiops_truncatus
ENSPTIG00000014214	SND1	71	90.649	ENSUAMG00000002820	-	90	90.649	Ursus_americanus
ENSPTIG00000014214	SND1	91	99.049	ENSUAMG00000005604	-	93	99.049	Ursus_americanus
ENSPTIG00000014214	SND1	100	99.231	ENSUMAG00000005960	SND1	100	99.231	Ursus_maritimus
ENSPTIG00000014214	SND1	77	100.000	ENSVPAG00000008302	SND1	74	100.000	Vicugna_pacos
ENSPTIG00000014214	SND1	100	99.121	ENSVVUG00000007226	SND1	100	99.121	Vulpes_vulpes
ENSPTIG00000014214	SND1	96	85.928	ENSXETG00000023043	snd1	100	84.554	Xenopus_tropicalis
ENSPTIG00000014214	SND1	93	81.473	ENSXCOG00000013629	snd1	99	81.473	Xiphophorus_couchianus
ENSPTIG00000014214	SND1	100	84.211	ENSXMAG00000011469	snd1	100	84.211	Xiphophorus_maculatus