EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000014530 (Gene tree)
Gene ID: 102958384
Gene Symbol: SF3B4
Alias: -
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 4553 bases
Position: chrKE721871.1:262204-266756
Accession: 102958384
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000015462	RRM_1	PF00076.22	2.8e-39	1	2
ENSPTIP00000015462	RRM_1	PF00076.22	2.8e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000019598	SF3B4-201	1275	XM_007088039	ENSPTIP00000015462	424 (aa)	XP_007088101	UPI00042BB56D

Gene Model

Click here to download ENSPTIG00000014530's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000014530's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000014530	SF3B4	56	40.526	ENSPTIG00000010106	PABPC4L	99	40.526
ENSPTIG00000014530	SF3B4	54	36.508	ENSPTIG00000006524	PABPC1L	60	36.508
ENSPTIG00000014530	SF3B4	70	40.310	ENSPTIG00000021083	PABPC1	62	40.310

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000014530	SF3B4	100	99.292	ENSG00000143368	SF3B4	100	100.000	Homo_sapiens
ENSPTIG00000014530	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	80.564	Acanthochromis_polyacanthus
ENSPTIG00000014530	SF3B4	100	99.528	ENSAMEG00000010073	SF3B4	100	99.528	Ailuropoda_melanoleuca
ENSPTIG00000014530	SF3B4	57	96.667	ENSAOCG00000019801	sf3b4	77	80.564	Amphiprion_ocellaris
ENSPTIG00000014530	SF3B4	57	96.667	ENSAPEG00000010365	sf3b4	77	80.564	Amphiprion_percula
ENSPTIG00000014530	SF3B4	57	96.250	ENSATEG00000012844	sf3b4	60	96.250	Anabas_testudineus
ENSPTIG00000014530	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	90.078	Anolis_carolinensis
ENSPTIG00000014530	SF3B4	100	99.292	ENSANAG00000031025	SF3B4	100	99.292	Aotus_nancymaae
ENSPTIG00000014530	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSPTIG00000014530	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSPTIG00000014530	SF3B4	90	96.859	ENSBTAG00000012793	-	94	96.859	Bos_taurus
ENSPTIG00000014530	SF3B4	100	99.528	ENSBTAG00000012495	SF3B4	100	99.528	Bos_taurus
ENSPTIG00000014530	SF3B4	90	82.131	ENSCJAG00000042351	SF3B4	87	82.131	Callithrix_jacchus
ENSPTIG00000014530	SF3B4	100	99.057	ENSCAFG00000011617	SF3B4	100	99.057	Canis_familiaris
ENSPTIG00000014530	SF3B4	100	99.057	ENSCAFG00020019775	SF3B4	100	99.057	Canis_lupus_dingo
ENSPTIG00000014530	SF3B4	100	99.528	ENSCHIG00000025663	-	100	99.528	Capra_hircus
ENSPTIG00000014530	SF3B4	100	99.292	ENSTSYG00000009295	SF3B4	100	99.292	Carlito_syrichta
ENSPTIG00000014530	SF3B4	100	99.292	ENSCPOG00000008267	SF3B4	100	99.292	Cavia_porcellus
ENSPTIG00000014530	SF3B4	100	86.551	ENSCCAG00000021751	-	69	92.901	Cebus_capucinus
ENSPTIG00000014530	SF3B4	95	85.323	ENSCCAG00000019823	-	71	91.362	Cebus_capucinus
ENSPTIG00000014530	SF3B4	100	99.292	ENSCATG00000033114	SF3B4	100	99.292	Cercocebus_atys
ENSPTIG00000014530	SF3B4	100	99.292	ENSCLAG00000015851	SF3B4	100	99.292	Chinchilla_lanigera
ENSPTIG00000014530	SF3B4	100	99.292	ENSCSAG00000018129	SF3B4	100	99.292	Chlorocebus_sabaeus
ENSPTIG00000014530	SF3B4	99	85.849	ENSCPBG00000008041	SF3B4	91	90.885	Chrysemys_picta_bellii
ENSPTIG00000014530	SF3B4	51	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSPTIG00000014530	SF3B4	100	99.292	ENSCANG00000035579	SF3B4	100	99.292	Colobus_angolensis_palliatus
ENSPTIG00000014530	SF3B4	100	99.292	ENSCGRG00001003590	Sf3b4	100	99.292	Cricetulus_griseus_chok1gshd
ENSPTIG00000014530	SF3B4	100	99.292	ENSCGRG00000016914	Sf3b4	100	99.292	Cricetulus_griseus_crigri
ENSPTIG00000014530	SF3B4	56	94.093	ENSCVAG00000005536	sf3b4	54	100.000	Cyprinodon_variegatus
ENSPTIG00000014530	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	79.310	Danio_rerio
ENSPTIG00000014530	SF3B4	98	96.635	ENSDNOG00000048908	-	99	96.635	Dasypus_novemcinctus
ENSPTIG00000014530	SF3B4	97	80.872	ENSDNOG00000037231	-	76	82.109	Dasypus_novemcinctus
ENSPTIG00000014530	SF3B4	100	99.528	ENSDORG00000016366	Sf3b4	100	99.528	Dipodomys_ordii
ENSPTIG00000014530	SF3B4	76	92.901	ENSETEG00000008963	SF3B4	76	92.901	Echinops_telfairi
ENSPTIG00000014530	SF3B4	100	99.528	ENSEASG00005001477	SF3B4	100	99.528	Equus_asinus_asinus
ENSPTIG00000014530	SF3B4	100	99.528	ENSECAG00000024737	SF3B4	100	99.528	Equus_caballus
ENSPTIG00000014530	SF3B4	100	99.528	ENSFCAG00000010106	SF3B4	100	99.528	Felis_catus
ENSPTIG00000014530	SF3B4	100	99.292	ENSFDAG00000009286	SF3B4	100	99.292	Fukomys_damarensis
ENSPTIG00000014530	SF3B4	54	96.957	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSPTIG00000014530	SF3B4	99	89.125	ENSGALG00000013352	SF3B4	90	89.817	Gallus_gallus
ENSPTIG00000014530	SF3B4	63	92.453	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSPTIG00000014530	SF3B4	99	85.613	ENSGAGG00000025055	SF3B4	79	90.625	Gopherus_agassizii
ENSPTIG00000014530	SF3B4	100	99.292	ENSGGOG00000004761	SF3B4	100	99.292	Gorilla_gorilla
ENSPTIG00000014530	SF3B4	100	73.349	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSPTIG00000014530	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSPTIG00000014530	SF3B4	100	99.292	ENSHGLG00000012360	SF3B4	100	99.292	Heterocephalus_glaber_female
ENSPTIG00000014530	SF3B4	100	98.113	ENSHGLG00100008533	SF3B4	100	98.113	Heterocephalus_glaber_male
ENSPTIG00000014530	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	77	79.688	Ictalurus_punctatus
ENSPTIG00000014530	SF3B4	100	99.528	ENSSTOG00000000684	-	100	99.528	Ictidomys_tridecemlineatus
ENSPTIG00000014530	SF3B4	76	84.483	ENSJJAG00000022500	Sf3b4	95	84.848	Jaculus_jaculus
ENSPTIG00000014530	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSPTIG00000014530	SF3B4	55	97.425	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSPTIG00000014530	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	87	85.625	Latimeria_chalumnae
ENSPTIG00000014530	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.580	Lepisosteus_oculatus
ENSPTIG00000014530	SF3B4	100	99.059	ENSLAFG00000008531	SF3B4	100	99.059	Loxodonta_africana
ENSPTIG00000014530	SF3B4	100	99.292	ENSMFAG00000042395	SF3B4	100	99.292	Macaca_fascicularis
ENSPTIG00000014530	SF3B4	93	70.960	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSPTIG00000014530	SF3B4	100	99.292	ENSMMUG00000007256	SF3B4	100	99.292	Macaca_mulatta
ENSPTIG00000014530	SF3B4	100	99.292	ENSMNEG00000031839	SF3B4	100	99.292	Macaca_nemestrina
ENSPTIG00000014530	SF3B4	93	70.455	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSPTIG00000014530	SF3B4	100	99.292	ENSMLEG00000038667	SF3B4	100	99.292	Mandrillus_leucophaeus
ENSPTIG00000014530	SF3B4	57	97.083	ENSMAMG00000014692	sf3b4	60	97.083	Mastacembelus_armatus
ENSPTIG00000014530	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSPTIG00000014530	SF3B4	99	87.707	ENSMGAG00000000653	SF3B4	91	89.556	Meleagris_gallopavo
ENSPTIG00000014530	SF3B4	100	99.292	ENSMAUG00000015266	Sf3b4	100	99.292	Mesocricetus_auratus
ENSPTIG00000014530	SF3B4	100	99.528	ENSMICG00000044961	SF3B4	100	99.528	Microcebus_murinus
ENSPTIG00000014530	SF3B4	98	94.217	ENSMOCG00000014155	-	100	94.217	Microtus_ochrogaster
ENSPTIG00000014530	SF3B4	100	99.292	ENSMOCG00000013658	-	100	99.292	Microtus_ochrogaster
ENSPTIG00000014530	SF3B4	54	97.826	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSPTIG00000014530	SF3B4	100	99.292	ENSMODG00000018767	SF3B4	100	99.292	Monodelphis_domestica
ENSPTIG00000014530	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSPTIG00000014530	SF3B4	100	99.057	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.057	Mus_caroli
ENSPTIG00000014530	SF3B4	100	99.292	ENSMUSG00000068856	Sf3b4	100	99.292	Mus_musculus
ENSPTIG00000014530	SF3B4	100	99.292	MGP_PahariEiJ_G0026809	Sf3b4	100	99.292	Mus_pahari
ENSPTIG00000014530	SF3B4	100	99.292	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.292	Mus_spretus
ENSPTIG00000014530	SF3B4	100	99.528	ENSMPUG00000005563	SF3B4	100	99.528	Mustela_putorius_furo
ENSPTIG00000014530	SF3B4	100	99.292	ENSMLUG00000010789	SF3B4	100	99.292	Myotis_lucifugus
ENSPTIG00000014530	SF3B4	100	99.057	ENSNGAG00000016337	Sf3b4	100	99.057	Nannospalax_galili
ENSPTIG00000014530	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSPTIG00000014530	SF3B4	100	69.626	ENSNLEG00000009693	-	100	69.626	Nomascus_leucogenys
ENSPTIG00000014530	SF3B4	100	76.415	ENSNLEG00000000537	-	82	84.877	Nomascus_leucogenys
ENSPTIG00000014530	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSPTIG00000014530	SF3B4	99	96.912	ENSOPRG00000010808	SF3B4	99	96.912	Ochotona_princeps
ENSPTIG00000014530	SF3B4	75	87.066	ENSODEG00000003597	-	79	87.066	Octodon_degus
ENSPTIG00000014530	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSPTIG00000014530	SF3B4	98	58.255	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSPTIG00000014530	SF3B4	100	99.528	ENSOCUG00000004614	SF3B4	100	99.528	Oryctolagus_cuniculus
ENSPTIG00000014530	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSPTIG00000014530	SF3B4	100	99.528	ENSOGAG00000006265	SF3B4	100	99.528	Otolemur_garnettii
ENSPTIG00000014530	SF3B4	86	78.846	ENSOARG00000007368	-	77	79.688	Ovis_aries
ENSPTIG00000014530	SF3B4	100	99.528	ENSOARG00000020718	-	100	99.528	Ovis_aries
ENSPTIG00000014530	SF3B4	100	81.604	ENSPPAG00000030024	-	78	82.716	Pan_paniscus
ENSPTIG00000014530	SF3B4	100	99.292	ENSPPAG00000040904	SF3B4	100	99.292	Pan_paniscus
ENSPTIG00000014530	SF3B4	100	99.528	ENSPPRG00000007384	SF3B4	100	99.528	Panthera_pardus
ENSPTIG00000014530	SF3B4	100	99.292	ENSPTRG00000001243	SF3B4	100	99.292	Pan_troglodytes
ENSPTIG00000014530	SF3B4	100	79.245	ENSPTRG00000049727	-	59	90.254	Pan_troglodytes
ENSPTIG00000014530	SF3B4	100	99.292	ENSPANG00000005126	SF3B4	100	99.292	Papio_anubis
ENSPTIG00000014530	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSPTIG00000014530	SF3B4	66	75.714	ENSPSIG00000009565	SF3B4	68	98.378	Pelodiscus_sinensis
ENSPTIG00000014530	SF3B4	100	99.292	ENSPEMG00000017568	Sf3b4	100	99.292	Peromyscus_maniculatus_bairdii
ENSPTIG00000014530	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSPTIG00000014530	SF3B4	100	99.292	ENSPCIG00000008765	SF3B4	100	99.292	Phascolarctos_cinereus
ENSPTIG00000014530	SF3B4	64	90.476	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSPTIG00000014530	SF3B4	64	90.476	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSPTIG00000014530	SF3B4	64	90.476	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSPTIG00000014530	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSPTIG00000014530	SF3B4	100	99.528	ENSPCOG00000015399	SF3B4	100	99.528	Propithecus_coquereli
ENSPTIG00000014530	SF3B4	100	99.528	ENSPVAG00000014171	SF3B4	100	99.528	Pteropus_vampyrus
ENSPTIG00000014530	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSPTIG00000014530	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	61	96.667	Pygocentrus_nattereri
ENSPTIG00000014530	SF3B4	100	99.292	ENSRNOG00000021181	Sf3b4	100	99.292	Rattus_norvegicus
ENSPTIG00000014530	SF3B4	100	99.292	ENSRBIG00000043392	SF3B4	100	99.292	Rhinopithecus_bieti
ENSPTIG00000014530	SF3B4	92	71.465	ENSRROG00000028213	-	91	67.647	Rhinopithecus_roxellana
ENSPTIG00000014530	SF3B4	100	99.292	ENSRROG00000029366	SF3B4	100	99.292	Rhinopithecus_roxellana
ENSPTIG00000014530	SF3B4	100	72.642	ENSSBOG00000025174	-	73	79.567	Saimiri_boliviensis_boliviensis
ENSPTIG00000014530	SF3B4	100	99.057	ENSSBOG00000012310	-	100	99.057	Saimiri_boliviensis_boliviensis
ENSPTIG00000014530	SF3B4	100	96.698	ENSSHAG00000004043	SF3B4	100	98.950	Sarcophilus_harrisii
ENSPTIG00000014530	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSPTIG00000014530	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	60	96.667	Scophthalmus_maximus
ENSPTIG00000014530	SF3B4	57	97.083	ENSSDUG00000012064	sf3b4	60	97.083	Seriola_dumerili
ENSPTIG00000014530	SF3B4	57	97.083	ENSSLDG00000014226	sf3b4	60	97.083	Seriola_lalandi_dorsalis
ENSPTIG00000014530	SF3B4	71	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSPTIG00000014530	SF3B4	57	97.500	ENSSPAG00000019219	sf3b4	60	97.500	Stegastes_partitus
ENSPTIG00000014530	SF3B4	85	66.298	ENSSSCG00000039440	-	79	65.741	Sus_scrofa
ENSPTIG00000014530	SF3B4	100	99.292	ENSSSCG00000006665	-	100	99.292	Sus_scrofa
ENSPTIG00000014530	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSPTIG00000014530	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSPTIG00000014530	SF3B4	100	99.528	ENSTTRG00000005217	SF3B4	100	99.528	Tursiops_truncatus
ENSPTIG00000014530	SF3B4	100	99.528	ENSUAMG00000022468	SF3B4	100	99.528	Ursus_americanus
ENSPTIG00000014530	SF3B4	100	98.585	ENSUMAG00000003802	SF3B4	100	98.585	Ursus_maritimus
ENSPTIG00000014530	SF3B4	97	99.515	ENSVPAG00000008152	SF3B4	100	99.515	Vicugna_pacos
ENSPTIG00000014530	SF3B4	99	92.584	ENSVVUG00000007732	-	100	92.584	Vulpes_vulpes
ENSPTIG00000014530	SF3B4	65	96.377	ENSVVUG00000022697	-	58	96.377	Vulpes_vulpes
ENSPTIG00000014530	SF3B4	54	97.391	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSPTIG00000014530	SF3B4	54	97.391	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus