EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000014829 (Gene tree)
Gene ID: 102956501
Gene Symbol: APEX1
Alias: -
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 4772 bases
Position: chrKE721961.1:1347968-1352739
Accession: 102956501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000015862	Exo_endo_phos	PF03372.23	3.4e-22	1	1
ENSPTIP00000015869	Exo_endo_phos	PF03372.23	3.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000020017	-	3798	XM_007091368	ENSPTIP00000015862	318 (aa)	XP_007091430	W6FFD4
ENSPTIT00000020024	-	3491	XM_007091367	ENSPTIP00000015869	318 (aa)	XP_007091429	W6FFD4

Gene Model

Click here to download ENSPTIG00000014829's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000014829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000014829	APEX1	100	96.226	ENSG00000100823	APEX1	100	96.226	Homo_sapiens
ENSPTIG00000014829	APEX1	88	69.892	ENSAPOG00000017002	apex1	94	68.858	Acanthochromis_polyacanthus
ENSPTIG00000014829	APEX1	100	98.428	ENSAMEG00000005418	APEX1	100	98.428	Ailuropoda_melanoleuca
ENSPTIG00000014829	APEX1	87	71.223	ENSACIG00000010653	apex1	97	70.242	Amphilophus_citrinellus
ENSPTIG00000014829	APEX1	88	69.534	ENSAOCG00000009649	apex1	93	68.512	Amphiprion_ocellaris
ENSPTIG00000014829	APEX1	88	69.534	ENSAPEG00000021453	apex1	93	68.512	Amphiprion_percula
ENSPTIG00000014829	APEX1	99	67.405	ENSATEG00000002883	apex1	97	67.722	Anabas_testudineus
ENSPTIG00000014829	APEX1	100	71.118	ENSACAG00000008099	APEX1	100	71.118	Anolis_carolinensis
ENSPTIG00000014829	APEX1	100	96.541	ENSANAG00000030117	APEX1	100	96.541	Aotus_nancymaae
ENSPTIG00000014829	APEX1	87	71.739	ENSACLG00000018441	apex1	99	66.772	Astatotilapia_calliptera
ENSPTIG00000014829	APEX1	100	66.250	ENSAMXG00000034699	apex1	100	66.250	Astyanax_mexicanus
ENSPTIG00000014829	APEX1	100	95.912	ENSBTAG00000002745	APEX1	100	95.912	Bos_taurus
ENSPTIG00000014829	APEX1	80	45.312	WBGene00001372	exo-3	88	45.312	Caenorhabditis_elegans
ENSPTIG00000014829	APEX1	100	97.170	ENSCJAG00000009726	APEX1	100	97.170	Callithrix_jacchus
ENSPTIG00000014829	APEX1	100	95.912	ENSCAFG00000032033	APEX1	100	95.912	Canis_familiaris
ENSPTIG00000014829	APEX1	100	95.912	ENSCAFG00020014377	-	100	95.912	Canis_lupus_dingo
ENSPTIG00000014829	APEX1	54	93.023	ENSCAFG00020023002	-	96	93.023	Canis_lupus_dingo
ENSPTIG00000014829	APEX1	98	76.282	ENSCHIG00000014537	-	99	76.282	Capra_hircus
ENSPTIG00000014829	APEX1	100	95.283	ENSCHIG00000007298	-	100	95.283	Capra_hircus
ENSPTIG00000014829	APEX1	100	95.912	ENSTSYG00000034813	APEX1	100	95.912	Carlito_syrichta
ENSPTIG00000014829	APEX1	85	89.299	ENSCAPG00000016235	APEX1	91	97.881	Cavia_aperea
ENSPTIG00000014829	APEX1	100	96.226	ENSCPOG00000030909	APEX1	100	96.226	Cavia_porcellus
ENSPTIG00000014829	APEX1	100	83.333	ENSCCAG00000031931	-	100	83.333	Cebus_capucinus
ENSPTIG00000014829	APEX1	100	97.170	ENSCCAG00000033056	-	100	97.170	Cebus_capucinus
ENSPTIG00000014829	APEX1	100	95.912	ENSCATG00000015580	APEX1	100	95.912	Cercocebus_atys
ENSPTIG00000014829	APEX1	100	97.170	ENSCLAG00000001002	APEX1	100	97.170	Chinchilla_lanigera
ENSPTIG00000014829	APEX1	100	95.597	ENSCSAG00000016685	-	100	95.597	Chlorocebus_sabaeus
ENSPTIG00000014829	APEX1	100	95.597	ENSCSAG00000016670	-	100	95.597	Chlorocebus_sabaeus
ENSPTIG00000014829	APEX1	100	71.473	ENSCPBG00000009567	APEX1	100	71.473	Chrysemys_picta_bellii
ENSPTIG00000014829	APEX1	93	53.465	ENSCING00000008137	-	96	53.465	Ciona_intestinalis
ENSPTIG00000014829	APEX1	83	51.698	ENSCSAVG00000007144	-	100	52.510	Ciona_savignyi
ENSPTIG00000014829	APEX1	100	96.226	ENSCANG00000030726	APEX1	100	96.226	Colobus_angolensis_palliatus
ENSPTIG00000014829	APEX1	100	92.453	ENSCGRG00001017046	Apex1	100	92.453	Cricetulus_griseus_chok1gshd
ENSPTIG00000014829	APEX1	100	92.453	ENSCGRG00000008984	Apex1	100	92.453	Cricetulus_griseus_crigri
ENSPTIG00000014829	APEX1	99	65.409	ENSCSEG00000017499	apex1	99	65.409	Cynoglossus_semilaevis
ENSPTIG00000014829	APEX1	88	72.043	ENSCVAG00000022075	apex1	99	67.089	Cyprinodon_variegatus
ENSPTIG00000014829	APEX1	100	66.352	ENSDARG00000045843	apex1	100	66.667	Danio_rerio
ENSPTIG00000014829	APEX1	100	91.195	ENSDNOG00000042234	APEX1	95	91.195	Dasypus_novemcinctus
ENSPTIG00000014829	APEX1	100	96.541	ENSDORG00000001616	Apex1	100	96.541	Dipodomys_ordii
ENSPTIG00000014829	APEX1	100	94.969	ENSETEG00000004855	-	100	94.969	Echinops_telfairi
ENSPTIG00000014829	APEX1	75	64.854	ENSEBUG00000000622	-	92	64.854	Eptatretus_burgeri
ENSPTIG00000014829	APEX1	100	98.113	ENSEASG00005017489	APEX1	74	98.113	Equus_asinus_asinus
ENSPTIG00000014829	APEX1	100	98.113	ENSECAG00000022325	APEX1	82	98.113	Equus_caballus
ENSPTIG00000014829	APEX1	91	94.444	ENSEEUG00000012569	APEX1	100	94.444	Erinaceus_europaeus
ENSPTIG00000014829	APEX1	100	65.094	ENSELUG00000021706	apex1	100	66.038	Esox_lucius
ENSPTIG00000014829	APEX1	100	100.000	ENSFCAG00000030869	APEX1	100	100.000	Felis_catus
ENSPTIG00000014829	APEX1	100	96.226	ENSFDAG00000006120	APEX1	100	96.226	Fukomys_damarensis
ENSPTIG00000014829	APEX1	99	68.354	ENSFHEG00000009031	apex1	83	68.354	Fundulus_heteroclitus
ENSPTIG00000014829	APEX1	99	61.950	ENSGMOG00000007943	apex1	99	61.950	Gadus_morhua
ENSPTIG00000014829	APEX1	88	72.760	ENSGAFG00000005311	apex1	99	67.722	Gambusia_affinis
ENSPTIG00000014829	APEX1	99	65.506	ENSGACG00000019497	apex1	99	69.925	Gasterosteus_aculeatus
ENSPTIG00000014829	APEX1	100	71.160	ENSGAGG00000014999	APEX1	100	71.160	Gopherus_agassizii
ENSPTIG00000014829	APEX1	100	96.541	ENSGGOG00000002128	APEX1	100	96.541	Gorilla_gorilla
ENSPTIG00000014829	APEX1	99	66.139	ENSHBUG00000005894	apex1	99	66.456	Haplochromis_burtoni
ENSPTIG00000014829	APEX1	100	97.170	ENSHGLG00000002848	APEX1	100	97.170	Heterocephalus_glaber_female
ENSPTIG00000014829	APEX1	100	97.170	ENSHGLG00100017878	APEX1	100	97.170	Heterocephalus_glaber_male
ENSPTIG00000014829	APEX1	99	66.352	ENSHCOG00000009961	apex1	99	66.352	Hippocampus_comes
ENSPTIG00000014829	APEX1	100	68.339	ENSIPUG00000005799	apex1	100	68.339	Ictalurus_punctatus
ENSPTIG00000014829	APEX1	100	95.912	ENSSTOG00000010096	APEX1	100	95.912	Ictidomys_tridecemlineatus
ENSPTIG00000014829	APEX1	100	86.478	ENSJJAG00000003660	-	100	86.478	Jaculus_jaculus
ENSPTIG00000014829	APEX1	100	95.912	ENSJJAG00000012067	-	100	95.912	Jaculus_jaculus
ENSPTIG00000014829	APEX1	100	82.075	ENSJJAG00000020465	-	96	86.242	Jaculus_jaculus
ENSPTIG00000014829	APEX1	88	71.685	ENSKMAG00000021171	apex1	99	66.772	Kryptolebias_marmoratus
ENSPTIG00000014829	APEX1	88	68.459	ENSLBEG00000010248	apex1	99	63.608	Labrus_bergylta
ENSPTIG00000014829	APEX1	100	67.188	ENSLACG00000008617	APEX1	100	67.188	Latimeria_chalumnae
ENSPTIG00000014829	APEX1	100	67.081	ENSLOCG00000015516	apex1	99	67.081	Lepisosteus_oculatus
ENSPTIG00000014829	APEX1	100	94.654	ENSLAFG00000021872	APEX1	100	94.654	Loxodonta_africana
ENSPTIG00000014829	APEX1	100	95.912	ENSMFAG00000002565	APEX1	100	95.912	Macaca_fascicularis
ENSPTIG00000014829	APEX1	100	95.912	ENSMMUG00000048039	APEX1	100	95.912	Macaca_mulatta
ENSPTIG00000014829	APEX1	100	95.912	ENSMNEG00000036944	APEX1	100	95.912	Macaca_nemestrina
ENSPTIG00000014829	APEX1	100	95.912	ENSMLEG00000042125	APEX1	100	95.912	Mandrillus_leucophaeus
ENSPTIG00000014829	APEX1	88	72.043	ENSMAMG00000023526	apex1	99	67.405	Mastacembelus_armatus
ENSPTIG00000014829	APEX1	87	71.739	ENSMZEG00005014187	apex1	99	66.772	Maylandia_zebra
ENSPTIG00000014829	APEX1	100	93.396	ENSMAUG00000013994	Apex1	100	93.396	Mesocricetus_auratus
ENSPTIG00000014829	APEX1	100	97.170	ENSMICG00000043554	APEX1	100	97.170	Microcebus_murinus
ENSPTIG00000014829	APEX1	100	94.025	ENSMOCG00000013721	Apex1	100	94.025	Microtus_ochrogaster
ENSPTIG00000014829	APEX1	88	68.214	ENSMMOG00000010031	apex1	97	63.636	Mola_mola
ENSPTIG00000014829	APEX1	100	83.750	ENSMODG00000007125	APEX1	100	85.404	Monodelphis_domestica
ENSPTIG00000014829	APEX1	88	64.516	ENSMALG00000011699	apex1	79	63.140	Monopterus_albus
ENSPTIG00000014829	APEX1	99	95.584	MGP_CAROLIEiJ_G0019209	Apex1	100	94.944	Mus_caroli
ENSPTIG00000014829	APEX1	100	96.226	ENSMUSG00000035960	Apex1	100	96.226	Mus_musculus
ENSPTIG00000014829	APEX1	100	95.597	MGP_PahariEiJ_G0030232	Apex1	100	95.597	Mus_pahari
ENSPTIG00000014829	APEX1	100	96.226	MGP_SPRETEiJ_G0020101	Apex1	100	96.226	Mus_spretus
ENSPTIG00000014829	APEX1	100	96.875	ENSMLUG00000028957	APEX1	100	96.875	Myotis_lucifugus
ENSPTIG00000014829	APEX1	100	72.013	ENSNGAG00000021748	-	99	72.013	Nannospalax_galili
ENSPTIG00000014829	APEX1	100	95.597	ENSNGAG00000002725	-	100	95.597	Nannospalax_galili
ENSPTIG00000014829	APEX1	87	71.377	ENSNBRG00000005334	apex1	91	66.456	Neolamprologus_brichardi
ENSPTIG00000014829	APEX1	100	96.226	ENSNLEG00000010839	APEX1	100	96.226	Nomascus_leucogenys
ENSPTIG00000014829	APEX1	100	86.792	ENSMEUG00000014519	APEX1	100	86.792	Notamacropus_eugenii
ENSPTIG00000014829	APEX1	100	94.654	ENSOPRG00000014029	APEX1	100	94.654	Ochotona_princeps
ENSPTIG00000014829	APEX1	100	97.484	ENSODEG00000001703	-	100	97.484	Octodon_degus
ENSPTIG00000014829	APEX1	100	73.765	ENSODEG00000006583	-	100	73.765	Octodon_degus
ENSPTIG00000014829	APEX1	97	77.670	ENSODEG00000004777	-	99	77.670	Octodon_degus
ENSPTIG00000014829	APEX1	87	71.942	ENSONIG00000012089	apex1	99	67.089	Oreochromis_niloticus
ENSPTIG00000014829	APEX1	90	82.807	ENSOANG00000008836	APEX1	80	79.321	Ornithorhynchus_anatinus
ENSPTIG00000014829	APEX1	100	95.597	ENSOCUG00000005022	APEX1	100	95.597	Oryctolagus_cuniculus
ENSPTIG00000014829	APEX1	99	67.296	ENSORLG00000012378	apex1	99	67.296	Oryzias_latipes
ENSPTIG00000014829	APEX1	99	67.296	ENSORLG00020021371	apex1	99	67.296	Oryzias_latipes_hni
ENSPTIG00000014829	APEX1	99	67.296	ENSORLG00015020089	apex1	99	67.296	Oryzias_latipes_hsok
ENSPTIG00000014829	APEX1	99	67.296	ENSOMEG00000018876	apex1	99	67.610	Oryzias_melastigma
ENSPTIG00000014829	APEX1	98	85.577	ENSOGAG00000029355	-	100	85.577	Otolemur_garnettii
ENSPTIG00000014829	APEX1	100	96.226	ENSOGAG00000013335	-	100	96.226	Otolemur_garnettii
ENSPTIG00000014829	APEX1	99	80.380	ENSOARG00000014424	-	100	80.380	Ovis_aries
ENSPTIG00000014829	APEX1	97	91.558	ENSOARG00000001876	-	100	91.558	Ovis_aries
ENSPTIG00000014829	APEX1	100	94.340	ENSOARG00000019740	-	100	94.340	Ovis_aries
ENSPTIG00000014829	APEX1	100	96.541	ENSPPAG00000038760	APEX1	100	96.541	Pan_paniscus
ENSPTIG00000014829	APEX1	100	99.686	ENSPPRG00000011794	APEX1	100	99.686	Panthera_pardus
ENSPTIG00000014829	APEX1	100	96.541	ENSPTRG00000006093	APEX1	100	96.541	Pan_troglodytes
ENSPTIG00000014829	APEX1	100	95.912	ENSPANG00000022757	APEX1	100	95.912	Papio_anubis
ENSPTIG00000014829	APEX1	87	68.953	ENSPKIG00000003504	apex1	100	64.907	Paramormyrops_kingsleyae
ENSPTIG00000014829	APEX1	76	66.667	ENSPMGG00000016596	apex1	73	66.667	Periophthalmus_magnuspinnatus
ENSPTIG00000014829	APEX1	100	95.597	ENSPEMG00000019097	Apex1	100	95.597	Peromyscus_maniculatus_bairdii
ENSPTIG00000014829	APEX1	94	66.000	ENSPMAG00000007275	-	99	66.000	Petromyzon_marinus
ENSPTIG00000014829	APEX1	100	83.699	ENSPCIG00000023274	APEX1	100	85.670	Phascolarctos_cinereus
ENSPTIG00000014829	APEX1	88	73.118	ENSPFOG00000004178	apex1	99	68.454	Poecilia_formosa
ENSPTIG00000014829	APEX1	88	72.760	ENSPLAG00000012779	apex1	99	68.454	Poecilia_latipinna
ENSPTIG00000014829	APEX1	88	73.118	ENSPMEG00000019623	apex1	99	68.454	Poecilia_mexicana
ENSPTIG00000014829	APEX1	88	72.760	ENSPREG00000014298	apex1	99	68.139	Poecilia_reticulata
ENSPTIG00000014829	APEX1	100	96.226	ENSPPYG00000005565	APEX1	100	96.226	Pongo_abelii
ENSPTIG00000014829	APEX1	100	92.138	ENSPCAG00000010376	APEX1	100	92.138	Procavia_capensis
ENSPTIG00000014829	APEX1	100	97.170	ENSPCOG00000021564	APEX1	100	97.170	Propithecus_coquereli
ENSPTIG00000014829	APEX1	100	96.875	ENSPVAG00000010736	APEX1	100	96.875	Pteropus_vampyrus
ENSPTIG00000014829	APEX1	87	71.739	ENSPNYG00000023940	apex1	99	66.772	Pundamilia_nyererei
ENSPTIG00000014829	APEX1	93	66.216	ENSPNAG00000020897	apex1	96	66.102	Pygocentrus_nattereri
ENSPTIG00000014829	APEX1	100	95.283	ENSRNOG00000009663	Apex1	100	95.283	Rattus_norvegicus
ENSPTIG00000014829	APEX1	100	95.912	ENSRBIG00000038325	APEX1	99	95.912	Rhinopithecus_bieti
ENSPTIG00000014829	APEX1	100	81.761	ENSSBOG00000031372	-	100	81.761	Saimiri_boliviensis_boliviensis
ENSPTIG00000014829	APEX1	100	96.855	ENSSBOG00000018921	-	100	96.855	Saimiri_boliviensis_boliviensis
ENSPTIG00000014829	APEX1	100	82.716	ENSSHAG00000013524	APEX1	100	84.049	Sarcophilus_harrisii
ENSPTIG00000014829	APEX1	100	62.893	ENSSFOG00015001948	apex1	100	62.579	Scleropages_formosus
ENSPTIG00000014829	APEX1	87	70.144	ENSSMAG00000013348	apex1	99	66.246	Scophthalmus_maximus
ENSPTIG00000014829	APEX1	99	65.506	ENSSDUG00000016377	apex1	99	65.506	Seriola_dumerili
ENSPTIG00000014829	APEX1	99	66.139	ENSSLDG00000023005	apex1	99	66.139	Seriola_lalandi_dorsalis
ENSPTIG00000014829	APEX1	90	73.333	ENSSPUG00000000531	APEX1	95	73.333	Sphenodon_punctatus
ENSPTIG00000014829	APEX1	88	70.609	ENSSPAG00000000458	apex1	96	68.601	Stegastes_partitus
ENSPTIG00000014829	APEX1	100	96.226	ENSSSCG00000040060	-	100	96.226	Sus_scrofa
ENSPTIG00000014829	APEX1	96	56.774	ENSSSCG00000039705	-	99	58.609	Sus_scrofa
ENSPTIG00000014829	APEX1	74	60.593	ENSTGUG00000014378	APEX1	100	60.593	Taeniopygia_guttata
ENSPTIG00000014829	APEX1	87	68.345	ENSTRUG00000004268	apex1	95	63.924	Takifugu_rubripes
ENSPTIG00000014829	APEX1	99	64.241	ENSTNIG00000005778	apex1	99	64.241	Tetraodon_nigroviridis
ENSPTIG00000014829	APEX1	100	92.767	ENSTBEG00000006405	APEX1	100	92.767	Tupaia_belangeri
ENSPTIG00000014829	APEX1	74	95.763	ENSTTRG00000007860	APEX1	100	95.763	Tursiops_truncatus
ENSPTIG00000014829	APEX1	100	98.113	ENSUAMG00000010457	APEX1	100	98.113	Ursus_americanus
ENSPTIG00000014829	APEX1	100	98.113	ENSUMAG00000009178	APEX1	100	98.113	Ursus_maritimus
ENSPTIG00000014829	APEX1	74	90.254	ENSVPAG00000005083	APEX1	100	90.254	Vicugna_pacos
ENSPTIG00000014829	APEX1	100	95.283	ENSVVUG00000009010	APEX1	100	95.283	Vulpes_vulpes
ENSPTIG00000014829	APEX1	100	65.015	ENSXETG00000024773	apex1	100	67.290	Xenopus_tropicalis
ENSPTIG00000014829	APEX1	88	72.760	ENSXCOG00000015233	apex1	99	68.038	Xiphophorus_couchianus
ENSPTIG00000014829	APEX1	93	68.404	ENSXMAG00000006195	apex1	99	68.038	Xiphophorus_maculatus