EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015015 (Gene tree)
Gene ID: 102968814
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 8697 bases
Position: chrKE721675.1:6018549-6027245
Accession: 102968814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000016141	PRP38	PF03371.15	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000020302	PRPF38B-201	2743	XM_015534990	ENSPTIP00000016141	528 (aa)	XP_015390476	-

Gene Model

Click here to download ENSPTIG00000015015's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015015's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015015	PRPF38B	97	99.413	ENSAMEG00000004364	-	93	99.413	Ailuropoda_melanoleuca
ENSPTIG00000015015	PRPF38B	98	99.035	ENSCAFG00000029761	PRPF38B	95	99.035	Canis_familiaris
ENSPTIG00000015015	PRPF38B	98	98.069	ENSEASG00005000210	PRPF38B	95	98.069	Equus_asinus_asinus
ENSPTIG00000015015	PRPF38B	98	99.614	ENSFCAG00000039965	PRPF38B	95	99.614	Felis_catus
ENSPTIG00000015015	PRPF38B	98	97.683	ENSSTOG00000025032	PRPF38B	94	97.683	Ictidomys_tridecemlineatus
ENSPTIG00000015015	PRPF38B	98	99.421	ENSMPUG00000002738	PRPF38B	94	99.421	Mustela_putorius_furo
ENSPTIG00000015015	PRPF38B	98	89.961	ENSNGAG00000011476	-	94	91.506	Nannospalax_galili
ENSPTIG00000015015	PRPF38B	98	99.228	ENSVVUG00000000684	-	94	99.228	Vulpes_vulpes