EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000015162 (Gene tree)
Gene ID: -
Gene Symbol: SRL
Alias: -
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 46381 bases
Position: chrKE721566.1:913587-959967
Accession: 102958859
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000016356	MMR_HSR1	PF01926.23	7.5e-09	1	1
ENSPTIP00000016361	MMR_HSR1	PF01926.23	8.7e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000020522	SRL-201	5132	-	ENSPTIP00000016356	431 (aa)	-	-
ENSPTIT00000020527	SRL-202	1422	XM_007073352	ENSPTIP00000016361	473 (aa)	XP_007073414	UPI0009053DC5

Gene Model

Click here to download ENSPTIG00000015162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015162's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000015162	SRL	90	32.564	ENSPTIG00000018608	EHD2	68	32.727
ENSPTIG00000015162	SRL	86	32.708	ENSPTIG00000013343	EHD3	67	33.875
ENSPTIG00000015162	SRL	69	35.906	ENSPTIG00000021127	EHD4	56	35.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015162	SRL	100	97.680	ENSG00000185739	SRL	100	97.680	Homo_sapiens
ENSPTIG00000015162	SRL	99	76.047	ENSAPOG00000012432	SRL	98	74.720	Acanthochromis_polyacanthus
ENSPTIG00000015162	SRL	99	83.256	ENSAPOG00000018093	srl	99	82.766	Acanthochromis_polyacanthus
ENSPTIG00000015162	SRL	100	99.536	ENSAMEG00000010862	SRL	52	97.840	Ailuropoda_melanoleuca
ENSPTIG00000015162	SRL	99	83.488	ENSACIG00000015799	srl	98	83.032	Amphilophus_citrinellus
ENSPTIG00000015162	SRL	99	75.814	ENSACIG00000015419	SRL	98	75.339	Amphilophus_citrinellus
ENSPTIG00000015162	SRL	99	75.638	ENSAOCG00000017049	SRL	96	75.847	Amphiprion_ocellaris
ENSPTIG00000015162	SRL	99	83.488	ENSAOCG00000007574	srl	100	83.180	Amphiprion_ocellaris
ENSPTIG00000015162	SRL	99	83.488	ENSAPEG00000006911	srl	100	79.704	Amphiprion_percula
ENSPTIG00000015162	SRL	99	71.628	ENSAPEG00000006533	SRL	96	71.946	Amphiprion_percula
ENSPTIG00000015162	SRL	98	74.253	ENSATEG00000009643	SRL	52	71.868	Anabas_testudineus
ENSPTIG00000015162	SRL	99	83.256	ENSATEG00000024315	srl	100	79.281	Anabas_testudineus
ENSPTIG00000015162	SRL	99	90.950	ENSACAG00000016380	SRL	89	86.680	Anolis_carolinensis
ENSPTIG00000015162	SRL	98	84.360	ENSACLG00000027685	srl	97	82.579	Astatotilapia_calliptera
ENSPTIG00000015162	SRL	99	72.893	ENSACLG00000024674	SRL	55	72.794	Astatotilapia_calliptera
ENSPTIG00000015162	SRL	94	77.667	ENSAMXG00000038693	SRL	100	73.068	Astyanax_mexicanus
ENSPTIG00000015162	SRL	98	85.036	ENSAMXG00000018789	srl	92	79.747	Astyanax_mexicanus
ENSPTIG00000015162	SRL	99	98.140	ENSBTAG00000001078	SRL	58	97.143	Bos_taurus
ENSPTIG00000015162	SRL	100	97.680	ENSCJAG00000019750	SRL	100	95.772	Callithrix_jacchus
ENSPTIG00000015162	SRL	100	99.536	ENSCAFG00000019233	SRL	84	98.678	Canis_familiaris
ENSPTIG00000015162	SRL	100	99.536	ENSCAFG00020025024	SRL	56	98.249	Canis_lupus_dingo
ENSPTIG00000015162	SRL	99	98.140	ENSCHIG00000017927	SRL	56	97.566	Capra_hircus
ENSPTIG00000015162	SRL	100	98.376	ENSTSYG00000007919	SRL	100	98.376	Carlito_syrichta
ENSPTIG00000015162	SRL	100	98.144	ENSCPOG00000012643	SRL	100	96.829	Cavia_porcellus
ENSPTIG00000015162	SRL	100	91.183	ENSCCAG00000032646	SRL	100	97.625	Cebus_capucinus
ENSPTIG00000015162	SRL	100	97.680	ENSCATG00000032227	-	100	95.772	Cercocebus_atys
ENSPTIG00000015162	SRL	100	97.912	ENSCLAG00000016242	SRL	100	96.617	Chinchilla_lanigera
ENSPTIG00000015162	SRL	89	96.623	ENSCHOG00000001618	SRL	52	96.623	Choloepus_hoffmanni
ENSPTIG00000015162	SRL	99	94.041	ENSCPBG00000026371	SRL	99	88.430	Chrysemys_picta_bellii
ENSPTIG00000015162	SRL	91	62.087	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSPTIG00000015162	SRL	100	97.680	ENSCANG00000035872	SRL	100	97.680	Colobus_angolensis_palliatus
ENSPTIG00000015162	SRL	100	97.216	ENSCGRG00001016630	Srl	100	94.715	Cricetulus_griseus_chok1gshd
ENSPTIG00000015162	SRL	100	97.216	ENSCGRG00000005458	Srl	100	94.715	Cricetulus_griseus_crigri
ENSPTIG00000015162	SRL	98	73.286	ENSCSEG00000011866	SRL	89	72.235	Cynoglossus_semilaevis
ENSPTIG00000015162	SRL	99	83.721	ENSCSEG00000016151	srl	100	80.127	Cynoglossus_semilaevis
ENSPTIG00000015162	SRL	98	76.389	ENSCVAG00000022465	SRL	60	73.289	Cyprinodon_variegatus
ENSPTIG00000015162	SRL	99	83.721	ENSCVAG00000003513	srl	100	80.127	Cyprinodon_variegatus
ENSPTIG00000015162	SRL	99	85.116	ENSDARG00000104587	srl	100	81.818	Danio_rerio
ENSPTIG00000015162	SRL	88	77.083	ENSDARG00000112959	CABZ01072309.1	90	83.140	Danio_rerio
ENSPTIG00000015162	SRL	100	96.984	ENSDNOG00000011643	SRL	55	96.053	Dasypus_novemcinctus
ENSPTIG00000015162	SRL	100	97.216	ENSDORG00000014807	Srl	100	94.503	Dipodomys_ordii
ENSPTIG00000015162	SRL	85	65.508	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSPTIG00000015162	SRL	99	97.907	ENSEASG00005000942	SRL	55	96.923	Equus_asinus_asinus
ENSPTIG00000015162	SRL	99	97.907	ENSECAG00000024219	SRL	99	97.246	Equus_caballus
ENSPTIG00000015162	SRL	97	84.286	ENSELUG00000015616	srl	100	77.413	Esox_lucius
ENSPTIG00000015162	SRL	100	99.789	ENSFCAG00000022075	SRL	100	99.789	Felis_catus
ENSPTIG00000015162	SRL	99	93.007	ENSFALG00000004328	SRL	63	92.500	Ficedula_albicollis
ENSPTIG00000015162	SRL	100	98.144	ENSFDAG00000006199	SRL	100	95.137	Fukomys_damarensis
ENSPTIG00000015162	SRL	99	75.814	ENSFHEG00000011854	SRL	98	75.113	Fundulus_heteroclitus
ENSPTIG00000015162	SRL	99	82.558	ENSFHEG00000011239	srl	100	78.858	Fundulus_heteroclitus
ENSPTIG00000015162	SRL	99	81.406	ENSGMOG00000014954	srl	99	80.795	Gadus_morhua
ENSPTIG00000015162	SRL	99	92.774	ENSGALG00000038884	SRL	99	89.407	Gallus_gallus
ENSPTIG00000015162	SRL	99	76.744	ENSGAFG00000016984	SRL	98	75.339	Gambusia_affinis
ENSPTIG00000015162	SRL	99	83.256	ENSGAFG00000000010	srl	100	79.493	Gambusia_affinis
ENSPTIG00000015162	SRL	99	80.726	ENSGACG00000011332	srl	99	80.353	Gasterosteus_aculeatus
ENSPTIG00000015162	SRL	100	97.680	ENSGGOG00000011312	-	100	95.349	Gorilla_gorilla
ENSPTIG00000015162	SRL	99	72.235	ENSHBUG00000015710	SRL	58	70.638	Haplochromis_burtoni
ENSPTIG00000015162	SRL	98	84.360	ENSHBUG00000007581	srl	97	82.579	Haplochromis_burtoni
ENSPTIG00000015162	SRL	100	98.376	ENSHGLG00000015271	SRL	100	97.040	Heterocephalus_glaber_female
ENSPTIG00000015162	SRL	100	98.376	ENSHGLG00100019378	SRL	100	97.040	Heterocephalus_glaber_male
ENSPTIG00000015162	SRL	98	84.834	ENSHCOG00000008687	srl	98	82.805	Hippocampus_comes
ENSPTIG00000015162	SRL	99	72.082	ENSHCOG00000001012	SRL	50	70.640	Hippocampus_comes
ENSPTIG00000015162	SRL	97	70.644	ENSIPUG00000011609	SRL	95	69.037	Ictalurus_punctatus
ENSPTIG00000015162	SRL	99	82.093	ENSIPUG00000012513	srl	100	78.858	Ictalurus_punctatus
ENSPTIG00000015162	SRL	100	98.376	ENSSTOG00000021151	-	100	96.829	Ictidomys_tridecemlineatus
ENSPTIG00000015162	SRL	100	98.144	ENSJJAG00000016400	Srl	100	94.715	Jaculus_jaculus
ENSPTIG00000015162	SRL	99	76.047	ENSKMAG00000019537	SRL	100	75.964	Kryptolebias_marmoratus
ENSPTIG00000015162	SRL	98	84.798	ENSKMAG00000014115	srl	93	84.798	Kryptolebias_marmoratus
ENSPTIG00000015162	SRL	99	82.791	ENSLBEG00000026643	srl	100	79.281	Labrus_bergylta
ENSPTIG00000015162	SRL	99	75.638	ENSLBEG00000013811	SRL	95	75.566	Labrus_bergylta
ENSPTIG00000015162	SRL	99	87.209	ENSLACG00000002825	SRL	98	86.682	Latimeria_chalumnae
ENSPTIG00000015162	SRL	99	85.814	ENSLOCG00000002644	srl	99	82.766	Lepisosteus_oculatus
ENSPTIG00000015162	SRL	100	97.912	ENSLAFG00000006329	SRL	52	97.792	Loxodonta_africana
ENSPTIG00000015162	SRL	100	97.680	ENSMFAG00000037383	SRL	100	97.680	Macaca_fascicularis
ENSPTIG00000015162	SRL	100	97.680	ENSMNEG00000019236	-	100	93.658	Macaca_nemestrina
ENSPTIG00000015162	SRL	100	89.095	ENSMLEG00000032156	SRL	100	87.949	Mandrillus_leucophaeus
ENSPTIG00000015162	SRL	99	83.023	ENSMAMG00000023322	srl	94	82.579	Mastacembelus_armatus
ENSPTIG00000015162	SRL	98	74.023	ENSMAMG00000013756	SRL	53	73.128	Mastacembelus_armatus
ENSPTIG00000015162	SRL	99	72.893	ENSMZEG00005004010	SRL	59	69.787	Maylandia_zebra
ENSPTIG00000015162	SRL	98	84.360	ENSMZEG00005004548	srl	97	82.579	Maylandia_zebra
ENSPTIG00000015162	SRL	99	92.774	ENSMGAG00000009342	SRL	92	93.973	Meleagris_gallopavo
ENSPTIG00000015162	SRL	100	97.448	ENSMICG00000032307	SRL	100	95.772	Microcebus_murinus
ENSPTIG00000015162	SRL	100	96.984	ENSMOCG00000008208	Srl	100	94.715	Microtus_ochrogaster
ENSPTIG00000015162	SRL	99	83.256	ENSMMOG00000013970	srl	98	82.805	Mola_mola
ENSPTIG00000015162	SRL	99	73.516	ENSMMOG00000021572	SRL	99	72.527	Mola_mola
ENSPTIG00000015162	SRL	99	97.209	ENSMODG00000016380	-	51	94.737	Monodelphis_domestica
ENSPTIG00000015162	SRL	99	82.791	ENSMALG00000005039	srl	98	82.127	Monopterus_albus
ENSPTIG00000015162	SRL	97	76.202	ENSMALG00000000670	SRL	97	75.240	Monopterus_albus
ENSPTIG00000015162	SRL	100	97.912	MGP_CAROLIEiJ_G0020400	Srl	100	94.926	Mus_caroli
ENSPTIG00000015162	SRL	100	97.912	ENSMUSG00000022519	Srl	100	94.926	Mus_musculus
ENSPTIG00000015162	SRL	100	97.912	MGP_SPRETEiJ_G0021294	Srl	100	94.926	Mus_spretus
ENSPTIG00000015162	SRL	100	99.304	ENSMPUG00000015025	SRL	55	98.246	Mustela_putorius_furo
ENSPTIG00000015162	SRL	100	97.680	ENSMLUG00000030733	SRL	58	96.095	Myotis_lucifugus
ENSPTIG00000015162	SRL	100	97.680	ENSNGAG00000019741	Srl	100	94.715	Nannospalax_galili
ENSPTIG00000015162	SRL	98	73.333	ENSNBRG00000002422	SRL	56	72.622	Neolamprologus_brichardi
ENSPTIG00000015162	SRL	98	84.360	ENSNBRG00000023775	srl	99	80.000	Neolamprologus_brichardi
ENSPTIG00000015162	SRL	100	90.487	ENSNLEG00000029051	SRL	100	88.795	Nomascus_leucogenys
ENSPTIG00000015162	SRL	100	91.183	ENSOPRG00000000477	-	52	91.422	Ochotona_princeps
ENSPTIG00000015162	SRL	100	97.216	ENSODEG00000013256	SRL	100	94.503	Octodon_degus
ENSPTIG00000015162	SRL	99	82.791	ENSONIG00000005192	srl	99	77.987	Oreochromis_niloticus
ENSPTIG00000015162	SRL	100	98.144	ENSOCUG00000025140	SRL	50	98.013	Oryctolagus_cuniculus
ENSPTIG00000015162	SRL	99	76.056	ENSORLG00000015064	SRL	97	75.113	Oryzias_latipes
ENSPTIG00000015162	SRL	99	82.791	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSPTIG00000015162	SRL	99	82.558	ENSORLG00020019784	srl	85	78.647	Oryzias_latipes_hni
ENSPTIG00000015162	SRL	99	76.291	ENSORLG00020018173	SRL	97	75.339	Oryzias_latipes_hni
ENSPTIG00000015162	SRL	99	76.526	ENSORLG00015019063	SRL	97	75.566	Oryzias_latipes_hsok
ENSPTIG00000015162	SRL	99	82.093	ENSORLG00015009342	srl	97	78.224	Oryzias_latipes_hsok
ENSPTIG00000015162	SRL	99	82.326	ENSOMEG00000010006	srl	98	81.818	Oryzias_melastigma
ENSPTIG00000015162	SRL	99	74.032	ENSOMEG00000005682	SRL	53	73.187	Oryzias_melastigma
ENSPTIG00000015162	SRL	100	97.216	ENSOGAG00000029266	SRL	55	96.468	Otolemur_garnettii
ENSPTIG00000015162	SRL	99	98.140	ENSOARG00000003074	SRL	58	95.923	Ovis_aries
ENSPTIG00000015162	SRL	100	97.680	ENSPPAG00000024919	-	100	97.680	Pan_paniscus
ENSPTIG00000015162	SRL	100	100.000	ENSPPRG00000010274	SRL	100	100.000	Panthera_pardus
ENSPTIG00000015162	SRL	100	97.680	ENSPTRG00000007712	SRL	100	97.680	Pan_troglodytes
ENSPTIG00000015162	SRL	100	97.680	ENSPANG00000013804	SRL	98	96.696	Papio_anubis
ENSPTIG00000015162	SRL	99	76.815	ENSPKIG00000024974	SRL	94	73.362	Paramormyrops_kingsleyae
ENSPTIG00000015162	SRL	99	84.419	ENSPKIG00000006405	srl	100	80.761	Paramormyrops_kingsleyae
ENSPTIG00000015162	SRL	99	72.326	ENSPMGG00000023505	-	99	71.910	Periophthalmus_magnuspinnatus
ENSPTIG00000015162	SRL	98	85.308	ENSPMGG00000021081	srl	95	83.521	Periophthalmus_magnuspinnatus
ENSPTIG00000015162	SRL	100	97.680	ENSPEMG00000015842	Srl	100	94.926	Peromyscus_maniculatus_bairdii
ENSPTIG00000015162	SRL	97	67.661	ENSPMAG00000004786	srl	99	67.431	Petromyzon_marinus
ENSPTIG00000015162	SRL	99	97.209	ENSPCIG00000012128	SRL	97	96.833	Phascolarctos_cinereus
ENSPTIG00000015162	SRL	99	81.179	ENSPFOG00000011408	srl	93	80.795	Poecilia_formosa
ENSPTIG00000015162	SRL	99	83.023	ENSPLAG00000008017	srl	96	82.579	Poecilia_latipinna
ENSPTIG00000015162	SRL	99	75.349	ENSPLAG00000002932	SRL	98	74.887	Poecilia_latipinna
ENSPTIG00000015162	SRL	99	73.804	ENSPMEG00000005890	SRL	59	72.527	Poecilia_mexicana
ENSPTIG00000015162	SRL	99	83.023	ENSPMEG00000006745	srl	96	82.579	Poecilia_mexicana
ENSPTIG00000015162	SRL	99	76.279	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSPTIG00000015162	SRL	99	82.791	ENSPREG00000007751	srl	98	82.353	Poecilia_reticulata
ENSPTIG00000015162	SRL	97	97.852	ENSPPYG00000007053	SRL	98	97.852	Pongo_abelii
ENSPTIG00000015162	SRL	99	95.814	ENSPCAG00000003378	-	50	95.701	Procavia_capensis
ENSPTIG00000015162	SRL	100	97.216	ENSPCOG00000023135	SRL	100	97.216	Propithecus_coquereli
ENSPTIG00000015162	SRL	100	98.608	ENSPVAG00000006586	SRL	56	98.013	Pteropus_vampyrus
ENSPTIG00000015162	SRL	99	72.460	ENSPNYG00000003423	SRL	58	69.787	Pundamilia_nyererei
ENSPTIG00000015162	SRL	98	84.360	ENSPNYG00000001200	srl	97	82.579	Pundamilia_nyererei
ENSPTIG00000015162	SRL	99	82.093	ENSPNAG00000023106	srl	100	79.070	Pygocentrus_nattereri
ENSPTIG00000015162	SRL	99	75.644	ENSPNAG00000007361	-	91	75.113	Pygocentrus_nattereri
ENSPTIG00000015162	SRL	100	98.144	ENSRNOG00000005269	Srl	50	97.792	Rattus_norvegicus
ENSPTIG00000015162	SRL	100	97.680	ENSRBIG00000042358	SRL	50	96.689	Rhinopithecus_bieti
ENSPTIG00000015162	SRL	100	97.680	ENSSBOG00000029273	SRL	100	95.772	Saimiri_boliviensis_boliviensis
ENSPTIG00000015162	SRL	99	97.209	ENSSHAG00000011715	-	50	96.833	Sarcophilus_harrisii
ENSPTIG00000015162	SRL	99	84.419	ENSSFOG00015009773	srl	100	79.175	Scleropages_formosus
ENSPTIG00000015162	SRL	99	73.303	ENSSMAG00000002232	SRL	50	71.868	Scophthalmus_maximus
ENSPTIG00000015162	SRL	99	82.558	ENSSMAG00000016274	srl	97	82.127	Scophthalmus_maximus
ENSPTIG00000015162	SRL	99	83.721	ENSSDUG00000010808	srl	97	83.032	Seriola_dumerili
ENSPTIG00000015162	SRL	99	74.371	ENSSDUG00000009161	SRL	98	74.388	Seriola_dumerili
ENSPTIG00000015162	SRL	99	83.721	ENSSLDG00000022024	srl	100	79.915	Seriola_lalandi_dorsalis
ENSPTIG00000015162	SRL	99	73.815	ENSSLDG00000014601	SRL	99	74.066	Seriola_lalandi_dorsalis
ENSPTIG00000015162	SRL	99	93.023	ENSSPUG00000016859	SRL	97	92.517	Sphenodon_punctatus
ENSPTIG00000015162	SRL	99	75.814	ENSSPAG00000014254	SRL	98	73.991	Stegastes_partitus
ENSPTIG00000015162	SRL	99	83.721	ENSSPAG00000019105	srl	100	80.338	Stegastes_partitus
ENSPTIG00000015162	SRL	99	97.442	ENSSSCG00000007949	SRL	99	97.098	Sus_scrofa
ENSPTIG00000015162	SRL	84	93.094	ENSTGUG00000016121	-	96	93.966	Taeniopygia_guttata
ENSPTIG00000015162	SRL	99	92.774	ENSTGUG00000003951	-	97	92.273	Taeniopygia_guttata
ENSPTIG00000015162	SRL	97	75.000	ENSTRUG00000013310	SRL	55	74.702	Takifugu_rubripes
ENSPTIG00000015162	SRL	98	84.834	ENSTRUG00000006005	srl	100	80.127	Takifugu_rubripes
ENSPTIG00000015162	SRL	98	84.834	ENSTNIG00000009739	srl	100	79.704	Tetraodon_nigroviridis
ENSPTIG00000015162	SRL	100	99.768	ENSUAMG00000005701	SRL	56	98.901	Ursus_americanus
ENSPTIG00000015162	SRL	100	99.536	ENSUMAG00000002574	SRL	56	98.681	Ursus_maritimus
ENSPTIG00000015162	SRL	100	99.536	ENSVVUG00000016331	-	50	98.465	Vulpes_vulpes
ENSPTIG00000015162	SRL	99	90.698	ENSXETG00000017313	srl	98	90.045	Xenopus_tropicalis
ENSPTIG00000015162	SRL	98	84.323	ENSXCOG00000010424	srl	97	84.323	Xiphophorus_couchianus
ENSPTIG00000015162	SRL	99	76.279	ENSXCOG00000014584	SRL	98	74.887	Xiphophorus_couchianus
ENSPTIG00000015162	SRL	99	74.260	ENSXMAG00000027598	SRL	62	73.187	Xiphophorus_maculatus
ENSPTIG00000015162	SRL	99	83.256	ENSXMAG00000004625	srl	95	79.493	Xiphophorus_maculatus