EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000015326 (Gene tree)
Gene ID: 102973023
Gene Symbol: RC3H1
Alias: -
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 41794 bases
Position: chrKE721788.1:2857848-2899641
Accession: 102973023
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000016660	zf-CCCH	PF00642.24	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000020833	RC3H1-201	3414	XM_007084006	ENSPTIP00000016660	1137 (aa)	XP_007084068	-

Gene Model

Click here to download ENSPTIG00000015326's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015326's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000015326	RC3H1	93	53.507	ENSPTIG00000014257	RC3H2	98	53.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015326	RC3H1	100	97.012	ENSG00000135870	RC3H1	100	97.012	Homo_sapiens
ENSPTIG00000015326	RC3H1	100	97.537	ENSAMEG00000015657	RC3H1	100	97.537	Ailuropoda_melanoleuca
ENSPTIG00000015326	RC3H1	100	88.184	ENSAPLG00000005341	RC3H1	100	87.652	Anas_platyrhynchos
ENSPTIG00000015326	RC3H1	100	85.217	ENSACAG00000015271	RC3H1	100	84.843	Anolis_carolinensis
ENSPTIG00000015326	RC3H1	100	97.452	ENSANAG00000036716	RC3H1	100	97.452	Aotus_nancymaae
ENSPTIG00000015326	RC3H1	100	95.782	ENSBTAG00000052708	RC3H1	100	95.782	Bos_taurus
ENSPTIG00000015326	RC3H1	100	97.100	ENSCJAG00000009106	RC3H1	100	97.100	Callithrix_jacchus
ENSPTIG00000015326	RC3H1	100	97.625	ENSCAFG00000014434	RC3H1	100	97.625	Canis_familiaris
ENSPTIG00000015326	RC3H1	100	97.540	ENSCAFG00020017112	RC3H1	100	97.540	Canis_lupus_dingo
ENSPTIG00000015326	RC3H1	100	96.042	ENSCHIG00000002873	RC3H1	100	96.042	Capra_hircus
ENSPTIG00000015326	RC3H1	99	95.515	ENSTSYG00000003913	RC3H1	99	95.075	Carlito_syrichta
ENSPTIG00000015326	RC3H1	100	91.652	ENSCPOG00000004349	RC3H1	100	91.213	Cavia_porcellus
ENSPTIG00000015326	RC3H1	100	94.903	ENSCCAG00000025652	RC3H1	100	94.991	Cebus_capucinus
ENSPTIG00000015326	RC3H1	100	97.188	ENSCATG00000033497	RC3H1	100	97.188	Cercocebus_atys
ENSPTIG00000015326	RC3H1	100	94.903	ENSCLAG00000011267	RC3H1	100	94.903	Chinchilla_lanigera
ENSPTIG00000015326	RC3H1	96	97.159	ENSCSAG00000011823	RC3H1	85	97.159	Chlorocebus_sabaeus
ENSPTIG00000015326	RC3H1	100	89.336	ENSCPBG00000014670	RC3H1	100	88.899	Chrysemys_picta_bellii
ENSPTIG00000015326	RC3H1	100	97.191	ENSCANG00000032120	RC3H1	100	97.191	Colobus_angolensis_palliatus
ENSPTIG00000015326	RC3H1	100	94.459	ENSCGRG00001020812	Rc3h1	100	93.843	Cricetulus_griseus_chok1gshd
ENSPTIG00000015326	RC3H1	100	94.459	ENSCGRG00000011952	Rc3h1	100	93.843	Cricetulus_griseus_crigri
ENSPTIG00000015326	RC3H1	55	94.577	ENSDNOG00000011494	RC3H1	99	94.577	Dasypus_novemcinctus
ENSPTIG00000015326	RC3H1	100	95.339	ENSDORG00000004855	Rc3h1	100	95.339	Dipodomys_ordii
ENSPTIG00000015326	RC3H1	82	96.667	ENSETEG00000012064	RC3H1	87	96.667	Echinops_telfairi
ENSPTIG00000015326	RC3H1	100	95.866	ENSEASG00005017000	RC3H1	100	95.866	Equus_asinus_asinus
ENSPTIG00000015326	RC3H1	100	95.690	ENSECAG00000021208	RC3H1	100	95.690	Equus_caballus
ENSPTIG00000015326	RC3H1	83	96.639	ENSEEUG00000014861	RC3H1	88	87.329	Erinaceus_europaeus
ENSPTIG00000015326	RC3H1	100	99.121	ENSFCAG00000014924	RC3H1	100	99.121	Felis_catus
ENSPTIG00000015326	RC3H1	100	87.260	ENSFALG00000002947	RC3H1	100	86.638	Ficedula_albicollis
ENSPTIG00000015326	RC3H1	100	95.167	ENSFDAG00000013303	RC3H1	100	95.167	Fukomys_damarensis
ENSPTIG00000015326	RC3H1	100	87.336	ENSGALG00000004587	RC3H1	100	86.801	Gallus_gallus
ENSPTIG00000015326	RC3H1	100	87.587	ENSGAGG00000018194	RC3H1	100	87.413	Gopherus_agassizii
ENSPTIG00000015326	RC3H1	100	89.930	ENSGGOG00000005735	RC3H1	100	89.930	Gorilla_gorilla
ENSPTIG00000015326	RC3H1	88	88.844	ENSHGLG00000004183	-	99	89.388	Heterocephalus_glaber_female
ENSPTIG00000015326	RC3H1	100	94.464	ENSHGLG00100008577	RC3H1	100	94.464	Heterocephalus_glaber_male
ENSPTIG00000015326	RC3H1	100	96.309	ENSSTOG00000016033	RC3H1	100	96.309	Ictidomys_tridecemlineatus
ENSPTIG00000015326	RC3H1	100	95.163	ENSJJAG00000018915	Rc3h1	100	94.723	Jaculus_jaculus
ENSPTIG00000015326	RC3H1	100	74.761	ENSLACG00000016186	RC3H1	100	77.244	Latimeria_chalumnae
ENSPTIG00000015326	RC3H1	97	97.096	ENSLAFG00000004367	RC3H1	100	97.096	Loxodonta_africana
ENSPTIG00000015326	RC3H1	100	97.100	ENSMFAG00000033725	RC3H1	100	97.100	Macaca_fascicularis
ENSPTIG00000015326	RC3H1	100	97.188	ENSMMUG00000000630	RC3H1	100	97.188	Macaca_mulatta
ENSPTIG00000015326	RC3H1	100	97.188	ENSMNEG00000035968	RC3H1	100	97.188	Macaca_nemestrina
ENSPTIG00000015326	RC3H1	100	97.100	ENSMLEG00000037455	RC3H1	100	97.100	Mandrillus_leucophaeus
ENSPTIG00000015326	RC3H1	97	94.383	ENSMAUG00000020864	Rc3h1	93	93.681	Mesocricetus_auratus
ENSPTIG00000015326	RC3H1	100	96.922	ENSMICG00000003000	RC3H1	100	96.922	Microcebus_murinus
ENSPTIG00000015326	RC3H1	93	93.113	ENSMOCG00000016587	Rc3h1	98	92.642	Microtus_ochrogaster
ENSPTIG00000015326	RC3H1	100	91.835	ENSMODG00000004289	RC3H1	100	91.659	Monodelphis_domestica
ENSPTIG00000015326	RC3H1	100	93.404	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.052	Mus_caroli
ENSPTIG00000015326	RC3H1	100	93.404	ENSMUSG00000040423	Rc3h1	100	92.876	Mus_musculus
ENSPTIG00000015326	RC3H1	100	93.228	MGP_PahariEiJ_G0027992	Rc3h1	100	92.700	Mus_pahari
ENSPTIG00000015326	RC3H1	100	93.228	MGP_SPRETEiJ_G0015563	Rc3h1	100	92.700	Mus_spretus
ENSPTIG00000015326	RC3H1	100	97.540	ENSMPUG00000004747	RC3H1	100	97.540	Mustela_putorius_furo
ENSPTIG00000015326	RC3H1	100	95.515	ENSMLUG00000011127	RC3H1	100	95.515	Myotis_lucifugus
ENSPTIG00000015326	RC3H1	100	95.866	ENSNGAG00000011135	Rc3h1	100	95.251	Nannospalax_galili
ENSPTIG00000015326	RC3H1	100	96.924	ENSNLEG00000015327	RC3H1	100	96.924	Nomascus_leucogenys
ENSPTIG00000015326	RC3H1	99	83.172	ENSOPRG00000013068	RC3H1	99	83.172	Ochotona_princeps
ENSPTIG00000015326	RC3H1	100	94.728	ENSODEG00000014185	RC3H1	100	94.728	Octodon_degus
ENSPTIG00000015326	RC3H1	100	90.696	ENSOANG00000000924	RC3H1	100	90.522	Ornithorhynchus_anatinus
ENSPTIG00000015326	RC3H1	99	96.075	ENSOCUG00000004930	RC3H1	98	96.075	Oryctolagus_cuniculus
ENSPTIG00000015326	RC3H1	100	89.728	ENSOGAG00000004044	RC3H1	100	89.728	Otolemur_garnettii
ENSPTIG00000015326	RC3H1	100	96.157	ENSOARG00000013011	RC3H1	100	96.157	Ovis_aries
ENSPTIG00000015326	RC3H1	100	97.015	ENSPPAG00000039253	RC3H1	100	97.015	Pan_paniscus
ENSPTIG00000015326	RC3H1	100	98.769	ENSPPRG00000009007	RC3H1	100	98.769	Panthera_pardus
ENSPTIG00000015326	RC3H1	100	97.015	ENSPTRG00000001702	RC3H1	100	97.015	Pan_troglodytes
ENSPTIG00000015326	RC3H1	100	97.100	ENSPANG00000008886	RC3H1	100	97.100	Papio_anubis
ENSPTIG00000015326	RC3H1	100	88.559	ENSPSIG00000016181	RC3H1	100	88.472	Pelodiscus_sinensis
ENSPTIG00000015326	RC3H1	100	94.019	ENSPEMG00000011966	Rc3h1	100	93.404	Peromyscus_maniculatus_bairdii
ENSPTIG00000015326	RC3H1	70	93.711	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSPTIG00000015326	RC3H1	100	93.673	ENSPPYG00000000490	RC3H1	98	96.000	Pongo_abelii
ENSPTIG00000015326	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSPTIG00000015326	RC3H1	83	96.383	ENSPCOG00000021795	RC3H1	96	96.383	Propithecus_coquereli
ENSPTIG00000015326	RC3H1	100	87.951	ENSPVAG00000007593	RC3H1	100	87.951	Pteropus_vampyrus
ENSPTIG00000015326	RC3H1	97	61.087	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSPTIG00000015326	RC3H1	100	97.103	ENSRBIG00000037743	RC3H1	100	97.103	Rhinopithecus_bieti
ENSPTIG00000015326	RC3H1	100	97.012	ENSRROG00000036546	RC3H1	100	97.012	Rhinopithecus_roxellana
ENSPTIG00000015326	RC3H1	93	87.925	ENSSBOG00000010664	RC3H1	100	91.046	Saimiri_boliviensis_boliviensis
ENSPTIG00000015326	RC3H1	100	90.789	ENSSHAG00000007589	RC3H1	100	90.526	Sarcophilus_harrisii
ENSPTIG00000015326	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSPTIG00000015326	RC3H1	100	84.119	ENSSPUG00000018472	RC3H1	100	83.930	Sphenodon_punctatus
ENSPTIG00000015326	RC3H1	100	97.274	ENSSSCG00000015498	RC3H1	100	97.274	Sus_scrofa
ENSPTIG00000015326	RC3H1	100	87.500	ENSTGUG00000004090	RC3H1	100	86.789	Taeniopygia_guttata
ENSPTIG00000015326	RC3H1	88	97.139	ENSTBEG00000005015	RC3H1	89	97.139	Tupaia_belangeri
ENSPTIG00000015326	RC3H1	100	96.842	ENSTTRG00000008572	RC3H1	100	96.842	Tursiops_truncatus
ENSPTIG00000015326	RC3H1	100	96.922	ENSUAMG00000019525	RC3H1	100	96.922	Ursus_americanus
ENSPTIG00000015326	RC3H1	100	97.452	ENSUMAG00000020087	RC3H1	100	97.452	Ursus_maritimus
ENSPTIG00000015326	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSPTIG00000015326	RC3H1	100	97.283	ENSVVUG00000014201	RC3H1	100	97.283	Vulpes_vulpes
ENSPTIG00000015326	RC3H1	100	77.903	ENSXETG00000020030	rc3h1	100	77.344	Xenopus_tropicalis