EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015420 (Gene tree)
Gene ID: 102959341
Gene Symbol: SYMPK
Alias: -
Full Name: symplekin
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 32428 bases
Position: chrKE722160.1:302161-334588
Accession: 102959341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000016843	Symplekin_C	PF12295.8	4.1e-74	1	1
ENSPTIP00000016860	Symplekin_C	PF12295.8	4.4e-74	1	1
ENSPTIP00000016869	Symplekin_C	PF12295.8	8.4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021027	SYMPK-201	3774	-	ENSPTIP00000016843	1190 (aa)	-	-
ENSPTIT00000021043	SYMPK-202	3750	XM_015543486	ENSPTIP00000016860	1249 (aa)	XP_015398972	-
ENSPTIT00000021053	SYMPK-203	3111	-	ENSPTIP00000016869	1036 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000015420's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03015	mRNA surveillance pathway	KEGG
ptg04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015420's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015420	SYMPK	100	94.898	ENSG00000125755	SYMPK	100	97.887	Homo_sapiens
ENSPTIG00000015420	SYMPK	93	74.110	ENSAPOG00000015934	sympk	97	74.067	Acanthochromis_polyacanthus
ENSPTIG00000015420	SYMPK	100	96.226	ENSAMEG00000000680	SYMPK	100	96.226	Ailuropoda_melanoleuca
ENSPTIG00000015420	SYMPK	91	75.276	ENSACIG00000006357	sympk	92	75.298	Amphilophus_citrinellus
ENSPTIG00000015420	SYMPK	91	75.184	ENSAOCG00000024124	sympk	92	75.092	Amphiprion_ocellaris
ENSPTIG00000015420	SYMPK	91	75.184	ENSAPEG00000003465	sympk	90	74.705	Amphiprion_percula
ENSPTIG00000015420	SYMPK	92	74.977	ENSATEG00000008472	sympk	90	74.977	Anabas_testudineus
ENSPTIG00000015420	SYMPK	85	86.166	ENSACAG00000004126	SYMPK	99	77.376	Anolis_carolinensis
ENSPTIG00000015420	SYMPK	100	95.130	ENSANAG00000021087	SYMPK	99	99.151	Aotus_nancymaae
ENSPTIG00000015420	SYMPK	93	74.887	ENSACLG00000001813	sympk	90	75.159	Astatotilapia_calliptera
ENSPTIG00000015420	SYMPK	93	74.087	ENSAMXG00000013677	sympk	91	74.398	Astyanax_mexicanus
ENSPTIG00000015420	SYMPK	100	94.973	ENSBTAG00000012101	SYMPK	100	95.287	Bos_taurus
ENSPTIG00000015420	SYMPK	86	30.647	WBGene00017797	symk-1	80	30.647	Caenorhabditis_elegans
ENSPTIG00000015420	SYMPK	94	98.927	ENSCJAG00000012172	SYMPK	99	97.084	Callithrix_jacchus
ENSPTIG00000015420	SYMPK	100	96.552	ENSCAFG00000004376	SYMPK	100	96.552	Canis_familiaris
ENSPTIG00000015420	SYMPK	100	96.552	ENSCAFG00020001815	SYMPK	100	96.552	Canis_lupus_dingo
ENSPTIG00000015420	SYMPK	100	95.287	ENSCHIG00000026784	SYMPK	100	95.287	Capra_hircus
ENSPTIG00000015420	SYMPK	100	94.292	ENSTSYG00000006268	SYMPK	98	96.774	Carlito_syrichta
ENSPTIG00000015420	SYMPK	91	97.149	ENSCAPG00000005112	SYMPK	96	95.497	Cavia_aperea
ENSPTIG00000015420	SYMPK	94	98.390	ENSCPOG00000010434	SYMPK	100	90.431	Cavia_porcellus
ENSPTIG00000015420	SYMPK	100	95.130	ENSCCAG00000036309	SYMPK	99	99.252	Cebus_capucinus
ENSPTIG00000015420	SYMPK	100	94.898	ENSCATG00000045107	SYMPK	99	98.970	Cercocebus_atys
ENSPTIG00000015420	SYMPK	100	93.559	ENSCLAG00000001206	SYMPK	100	93.873	Chinchilla_lanigera
ENSPTIG00000015420	SYMPK	100	94.898	ENSCSAG00000003115	SYMPK	100	94.976	Chlorocebus_sabaeus
ENSPTIG00000015420	SYMPK	74	100.000	ENSCHOG00000012456	SYMPK	81	100.000	Choloepus_hoffmanni
ENSPTIG00000015420	SYMPK	93	88.136	ENSCPBG00000007170	SYMPK	98	83.239	Chrysemys_picta_bellii
ENSPTIG00000015420	SYMPK	88	49.200	ENSCING00000021232	-	96	49.200	Ciona_intestinalis
ENSPTIG00000015420	SYMPK	87	47.793	ENSCSAVG00000005154	-	100	47.981	Ciona_savignyi
ENSPTIG00000015420	SYMPK	100	92.807	ENSCANG00000040907	SYMPK	99	94.737	Colobus_angolensis_palliatus
ENSPTIG00000015420	SYMPK	92	90.884	ENSCGRG00001010086	Sympk	100	90.884	Cricetulus_griseus_chok1gshd
ENSPTIG00000015420	SYMPK	94	73.929	ENSCSEG00000016802	sympk	91	73.929	Cynoglossus_semilaevis
ENSPTIG00000015420	SYMPK	96	71.306	ENSDARG00000059553	sympk	92	71.306	Danio_rerio
ENSPTIG00000015420	SYMPK	99	93.207	ENSDNOG00000016149	SYMPK	98	93.128	Dasypus_novemcinctus
ENSPTIG00000015420	SYMPK	92	36.988	FBgn0037371	Sym	95	37.044	Drosophila_melanogaster
ENSPTIG00000015420	SYMPK	71	62.327	ENSEBUG00000000387	sympk	89	62.327	Eptatretus_burgeri
ENSPTIG00000015420	SYMPK	100	95.840	ENSEASG00005014227	SYMPK	100	95.840	Equus_asinus_asinus
ENSPTIG00000015420	SYMPK	100	95.840	ENSECAG00000008163	SYMPK	100	95.840	Equus_caballus
ENSPTIG00000015420	SYMPK	74	94.667	ENSEEUG00000000270	-	81	94.667	Erinaceus_europaeus
ENSPTIG00000015420	SYMPK	93	75.380	ENSELUG00000000850	sympk	92	73.431	Esox_lucius
ENSPTIG00000015420	SYMPK	99	99.911	ENSFCAG00000007337	SYMPK	100	97.329	Felis_catus
ENSPTIG00000015420	SYMPK	100	93.721	ENSFDAG00000011272	SYMPK	100	93.878	Fukomys_damarensis
ENSPTIG00000015420	SYMPK	92	75.296	ENSFHEG00000010274	sympk	92	74.396	Fundulus_heteroclitus
ENSPTIG00000015420	SYMPK	91	73.088	ENSGMOG00000002357	sympk	100	73.088	Gadus_morhua
ENSPTIG00000015420	SYMPK	93	75.068	ENSGAFG00000010976	sympk	92	74.710	Gambusia_affinis
ENSPTIG00000015420	SYMPK	95	72.568	ENSGACG00000002735	sympk	98	74.839	Gasterosteus_aculeatus
ENSPTIG00000015420	SYMPK	58	85.429	ENSGAGG00000012538	-	88	85.191	Gopherus_agassizii
ENSPTIG00000015420	SYMPK	100	94.662	ENSGGOG00000003410	SYMPK	97	98.410	Gorilla_gorilla
ENSPTIG00000015420	SYMPK	93	74.977	ENSHBUG00000023564	sympk	90	75.249	Haplochromis_burtoni
ENSPTIG00000015420	SYMPK	100	89.246	ENSHGLG00000005228	SYMPK	100	89.246	Heterocephalus_glaber_female
ENSPTIG00000015420	SYMPK	100	93.296	ENSHGLG00100018571	SYMPK	100	93.296	Heterocephalus_glaber_male
ENSPTIG00000015420	SYMPK	92	70.155	ENSHCOG00000017400	sympk	91	70.155	Hippocampus_comes
ENSPTIG00000015420	SYMPK	93	74.257	ENSIPUG00000024020	SYMPK	90	74.194	Ictalurus_punctatus
ENSPTIG00000015420	SYMPK	100	95.051	ENSSTOG00000001534	SYMPK	100	95.051	Ictidomys_tridecemlineatus
ENSPTIG00000015420	SYMPK	100	93.109	ENSJJAG00000006633	Sympk	100	93.265	Jaculus_jaculus
ENSPTIG00000015420	SYMPK	92	75.205	ENSKMAG00000016292	sympk	92	73.890	Kryptolebias_marmoratus
ENSPTIG00000015420	SYMPK	92	74.932	ENSLBEG00000027913	sympk	96	71.204	Labrus_bergylta
ENSPTIG00000015420	SYMPK	93	74.345	ENSLACG00000016497	SYMPK	99	71.168	Latimeria_chalumnae
ENSPTIG00000015420	SYMPK	100	94.431	ENSLAFG00000008726	SYMPK	100	94.431	Loxodonta_africana
ENSPTIG00000015420	SYMPK	100	94.898	ENSMMUG00000015428	SYMPK	100	94.976	Macaca_mulatta
ENSPTIG00000015420	SYMPK	100	94.819	ENSMNEG00000019439	SYMPK	99	98.876	Macaca_nemestrina
ENSPTIG00000015420	SYMPK	100	94.898	ENSMLEG00000040508	SYMPK	99	98.970	Mandrillus_leucophaeus
ENSPTIG00000015420	SYMPK	94	73.381	ENSMAMG00000010486	sympk	89	74.931	Mastacembelus_armatus
ENSPTIG00000015420	SYMPK	93	74.887	ENSMZEG00005014146	sympk	90	75.159	Maylandia_zebra
ENSPTIG00000015420	SYMPK	93	97.513	ENSMAUG00000015657	Sympk	100	89.977	Mesocricetus_auratus
ENSPTIG00000015420	SYMPK	100	94.510	ENSMICG00000001871	SYMPK	100	94.824	Microcebus_murinus
ENSPTIG00000015420	SYMPK	94	97.496	ENSMOCG00000008388	Sympk	100	91.270	Microtus_ochrogaster
ENSPTIG00000015420	SYMPK	93	71.681	ENSMMOG00000019227	sympk	96	71.681	Mola_mola
ENSPTIG00000015420	SYMPK	93	93.128	ENSMODG00000021534	SYMPK	97	87.309	Monodelphis_domestica
ENSPTIG00000015420	SYMPK	90	69.713	ENSMALG00000008347	sympk	96	70.032	Monopterus_albus
ENSPTIG00000015420	SYMPK	94	97.764	MGP_CAROLIEiJ_G0029267	Sympk	100	91.504	Mus_caroli
ENSPTIG00000015420	SYMPK	94	97.585	ENSMUSG00000023118	Sympk	100	90.705	Mus_musculus
ENSPTIG00000015420	SYMPK	100	91.790	MGP_PahariEiJ_G0021127	Sympk	100	91.712	Mus_pahari
ENSPTIG00000015420	SYMPK	94	97.674	MGP_SPRETEiJ_G0030351	-	100	91.193	Mus_spretus
ENSPTIG00000015420	SYMPK	100	94.510	ENSMPUG00000005505	SYMPK	100	94.510	Mustela_putorius_furo
ENSPTIG00000015420	SYMPK	75	94.737	ENSMLUG00000001359	SYMPK	100	90.348	Myotis_lucifugus
ENSPTIG00000015420	SYMPK	100	93.344	ENSNGAG00000000820	Sympk	100	93.344	Nannospalax_galili
ENSPTIG00000015420	SYMPK	91	74.338	ENSNBRG00000018101	sympk	91	75.872	Neolamprologus_brichardi
ENSPTIG00000015420	SYMPK	100	81.690	ENSNLEG00000002369	SYMPK	100	81.690	Nomascus_leucogenys
ENSPTIG00000015420	SYMPK	80	91.228	ENSMEUG00000003866	SYMPK	82	91.228	Notamacropus_eugenii
ENSPTIG00000015420	SYMPK	100	91.080	ENSOPRG00000009967	SYMPK	100	91.236	Ochotona_princeps
ENSPTIG00000015420	SYMPK	99	94.108	ENSODEG00000007519	SYMPK	99	94.108	Octodon_degus
ENSPTIG00000015420	SYMPK	92	74.706	ENSONIG00000016802	sympk	96	74.706	Oreochromis_niloticus
ENSPTIG00000015420	SYMPK	95	96.158	ENSOCUG00000005511	SYMPK	92	96.158	Oryctolagus_cuniculus
ENSPTIG00000015420	SYMPK	93	74.797	ENSORLG00000015338	sympk	96	74.446	Oryzias_latipes
ENSPTIG00000015420	SYMPK	93	74.707	ENSORLG00020004402	sympk	91	74.864	Oryzias_latipes_hni
ENSPTIG00000015420	SYMPK	93	74.797	ENSORLG00015005712	sympk	90	75.641	Oryzias_latipes_hsok
ENSPTIG00000015420	SYMPK	92	74.478	ENSOMEG00000022561	sympk	91	74.478	Oryzias_melastigma
ENSPTIG00000015420	SYMPK	100	94.976	ENSOGAG00000013483	SYMPK	100	94.976	Otolemur_garnettii
ENSPTIG00000015420	SYMPK	100	89.852	ENSOARG00000010349	SYMPK	100	90.219	Ovis_aries
ENSPTIG00000015420	SYMPK	100	94.976	ENSPPAG00000043204	SYMPK	100	94.976	Pan_paniscus
ENSPTIG00000015420	SYMPK	100	97.408	ENSPPRG00000004282	SYMPK	100	97.408	Panthera_pardus
ENSPTIG00000015420	SYMPK	100	94.976	ENSPTRG00000011169	SYMPK	100	94.976	Pan_troglodytes
ENSPTIG00000015420	SYMPK	100	94.898	ENSPANG00000019930	SYMPK	99	98.970	Papio_anubis
ENSPTIG00000015420	SYMPK	93	76.139	ENSPKIG00000017132	sympk	96	72.775	Paramormyrops_kingsleyae
ENSPTIG00000015420	SYMPK	94	97.764	ENSPEMG00000007564	Sympk	100	91.732	Peromyscus_maniculatus_bairdii
ENSPTIG00000015420	SYMPK	86	65.774	ENSPMAG00000004936	sympk	100	65.870	Petromyzon_marinus
ENSPTIG00000015420	SYMPK	95	92.145	ENSPCIG00000024476	SYMPK	99	86.180	Phascolarctos_cinereus
ENSPTIG00000015420	SYMPK	92	75.705	ENSPFOG00000001194	sympk	92	74.555	Poecilia_formosa
ENSPTIG00000015420	SYMPK	92	75.614	ENSPLAG00000012995	sympk	92	74.466	Poecilia_latipinna
ENSPTIG00000015420	SYMPK	92	75.614	ENSPMEG00000008099	sympk	92	74.466	Poecilia_mexicana
ENSPTIG00000015420	SYMPK	92	75.521	ENSPREG00000006176	sympk	92	74.763	Poecilia_reticulata
ENSPTIG00000015420	SYMPK	93	98.756	ENSPPYG00000010135	SYMPK	99	98.201	Pongo_abelii
ENSPTIG00000015420	SYMPK	94	91.252	ENSPCAG00000005182	SYMPK	94	91.252	Procavia_capensis
ENSPTIG00000015420	SYMPK	100	95.294	ENSPCOG00000023740	SYMPK	99	98.969	Propithecus_coquereli
ENSPTIG00000015420	SYMPK	97	94.507	ENSPVAG00000001355	SYMPK	100	94.507	Pteropus_vampyrus
ENSPTIG00000015420	SYMPK	93	74.887	ENSPNYG00000011455	sympk	90	74.887	Pundamilia_nyererei
ENSPTIG00000015420	SYMPK	93	75.291	ENSPNAG00000016505	sympk	89	75.291	Pygocentrus_nattereri
ENSPTIG00000015420	SYMPK	94	97.406	ENSRNOG00000014353	Sympk	100	91.348	Rattus_norvegicus
ENSPTIG00000015420	SYMPK	100	94.597	ENSRBIG00000040963	SYMPK	99	98.959	Rhinopithecus_bieti
ENSPTIG00000015420	SYMPK	100	94.819	ENSRROG00000024834	SYMPK	97	98.930	Rhinopithecus_roxellana
ENSPTIG00000015420	SYMPK	100	95.130	ENSSBOG00000034497	SYMPK	100	95.130	Saimiri_boliviensis_boliviensis
ENSPTIG00000015420	SYMPK	94	91.882	ENSSHAG00000003139	SYMPK	97	92.039	Sarcophilus_harrisii
ENSPTIG00000015420	SYMPK	93	76.271	ENSSFOG00015006974	sympk	90	76.271	Scleropages_formosus
ENSPTIG00000015420	SYMPK	92	74.635	ENSSMAG00000018130	sympk	71	75.116	Scophthalmus_maximus
ENSPTIG00000015420	SYMPK	92	74.729	ENSSDUG00000007092	sympk	90	74.774	Seriola_dumerili
ENSPTIG00000015420	SYMPK	92	74.729	ENSSLDG00000014774	sympk	96	72.269	Seriola_lalandi_dorsalis
ENSPTIG00000015420	SYMPK	61	100.000	ENSSARG00000004274	-	66	100.000	Sorex_araneus
ENSPTIG00000015420	SYMPK	95	86.307	ENSSPUG00000002789	SYMPK	97	80.564	Sphenodon_punctatus
ENSPTIG00000015420	SYMPK	93	74.441	ENSSPAG00000000854	sympk	91	74.441	Stegastes_partitus
ENSPTIG00000015420	SYMPK	100	95.991	ENSSSCG00000003093	SYMPK	100	95.991	Sus_scrofa
ENSPTIG00000015420	SYMPK	92	74.751	ENSTRUG00000010202	sympk	91	74.751	Takifugu_rubripes
ENSPTIG00000015420	SYMPK	91	74.771	ENSTNIG00000017855	sympk	99	73.333	Tetraodon_nigroviridis
ENSPTIG00000015420	SYMPK	89	94.805	ENSTBEG00000000454	SYMPK	87	94.805	Tupaia_belangeri
ENSPTIG00000015420	SYMPK	100	87.529	ENSTTRG00000014311	SYMPK	100	87.529	Tursiops_truncatus
ENSPTIG00000015420	SYMPK	100	94.409	ENSUAMG00000022272	SYMPK	100	94.256	Ursus_americanus
ENSPTIG00000015420	SYMPK	100	96.462	ENSUMAG00000023698	SYMPK	100	96.462	Ursus_maritimus
ENSPTIG00000015420	SYMPK	96	97.389	ENSVVUG00000003024	SYMPK	100	97.389	Vulpes_vulpes
ENSPTIG00000015420	SYMPK	92	74.480	ENSXETG00000024453	sympk	91	74.570	Xenopus_tropicalis
ENSPTIG00000015420	SYMPK	90	74.561	ENSXCOG00000015368	sympk	100	74.561	Xiphophorus_couchianus
ENSPTIG00000015420	SYMPK	92	75.568	ENSXMAG00000005737	sympk	93	73.114	Xiphophorus_maculatus