EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000015467 (Gene tree)
Gene ID: 102957787
Gene Symbol: ZNF408
Alias: -
Full Name: zinc finger protein 408
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 5261 bases
Position: chrKE721762.1:1142257-1147517
Accession: 102957787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	1	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	2	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	3	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	4	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	5	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	6	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	7	8
ENSPTIP00000016838	zf-C2H2	PF00096.26	1.9e-40	8	8
ENSPTIP00000016838	zf-met	PF12874.7	4.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021022	ZNF408-201	3015	XM_007082124	ENSPTIP00000016838	725 (aa)	XP_007082186	UPI00042BF419

Gene Model

Click here to download ENSPTIG00000015467's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015467's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000015467	ZNF408	50	41.700	ENSPTIG00000012277	-	88	40.647
ENSPTIG00000015467	ZNF408	79	36.653	ENSPTIG00000010807	PRDM5	72	36.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015467	ZNF408	99	81.704	ENSG00000175213	ZNF408	100	81.543	Homo_sapiens
ENSPTIG00000015467	ZNF408	100	87.034	ENSAMEG00000006904	ZNF408	100	87.034	Ailuropoda_melanoleuca
ENSPTIG00000015467	ZNF408	98	76.224	ENSANAG00000036294	ZNF408	94	82.876	Aotus_nancymaae
ENSPTIG00000015467	ZNF408	93	40.293	ENSAMXG00000032642	znf408	54	54.026	Astyanax_mexicanus
ENSPTIG00000015467	ZNF408	99	80.726	ENSCJAG00000019859	ZNF408	100	80.579	Callithrix_jacchus
ENSPTIG00000015467	ZNF408	100	88.752	ENSCAFG00000009143	ZNF408	97	88.752	Canis_familiaris
ENSPTIG00000015467	ZNF408	100	88.615	ENSCAFG00020019155	ZNF408	97	88.615	Canis_lupus_dingo
ENSPTIG00000015467	ZNF408	82	80.537	ENSCHIG00000025346	ZNF408	97	80.872	Capra_hircus
ENSPTIG00000015467	ZNF408	100	78.069	ENSTSYG00000025443	ZNF408	100	77.931	Carlito_syrichta
ENSPTIG00000015467	ZNF408	99	80.307	ENSCCAG00000029472	ZNF408	100	80.165	Cebus_capucinus
ENSPTIG00000015467	ZNF408	55	96.897	ENSCHOG00000009909	ZNF408	75	96.897	Choloepus_hoffmanni
ENSPTIG00000015467	ZNF408	100	70.564	ENSCGRG00001023588	Zfp408	100	70.014	Cricetulus_griseus_chok1gshd
ENSPTIG00000015467	ZNF408	100	70.564	ENSCGRG00000017618	Zfp408	100	70.014	Cricetulus_griseus_crigri
ENSPTIG00000015467	ZNF408	100	76.966	ENSDNOG00000047669	ZNF408	100	77.103	Dasypus_novemcinctus
ENSPTIG00000015467	ZNF408	99	71.170	ENSDORG00000000387	Zfp408	99	71.031	Dipodomys_ordii
ENSPTIG00000015467	ZNF408	89	64.248	ENSETEG00000017621	-	100	64.198	Echinops_telfairi
ENSPTIG00000015467	ZNF408	100	82.759	ENSEASG00005015461	ZNF408	100	82.759	Equus_asinus_asinus
ENSPTIG00000015467	ZNF408	100	82.897	ENSECAG00000010878	ZNF408	100	82.897	Equus_caballus
ENSPTIG00000015467	ZNF408	94	70.657	ENSEEUG00000010466	ZNF408	94	70.219	Erinaceus_europaeus
ENSPTIG00000015467	ZNF408	100	98.069	ENSFCAG00000029105	ZNF408	100	98.069	Felis_catus
ENSPTIG00000015467	ZNF408	84	39.158	ENSFHEG00000016754	-	58	59.011	Fundulus_heteroclitus
ENSPTIG00000015467	ZNF408	94	34.748	ENSGAFG00000018557	-	81	37.599	Gambusia_affinis
ENSPTIG00000015467	ZNF408	99	81.425	ENSGGOG00000010152	ZNF408	100	81.267	Gorilla_gorilla
ENSPTIG00000015467	ZNF408	86	82.183	ENSLAFG00000027848	ZNF408	100	82.183	Loxodonta_africana
ENSPTIG00000015467	ZNF408	99	83.636	ENSMICG00000045320	ZNF408	100	83.448	Microcebus_murinus
ENSPTIG00000015467	ZNF408	73	55.270	ENSMODG00000019895	-	83	53.266	Monodelphis_domestica
ENSPTIG00000015467	ZNF408	98	87.237	ENSMPUG00000005490	ZNF408	100	87.172	Mustela_putorius_furo
ENSPTIG00000015467	ZNF408	99	71.369	ENSNGAG00000000309	Zfp408	99	70.816	Nannospalax_galili
ENSPTIG00000015467	ZNF408	100	80.716	ENSNLEG00000014132	ZNF408	100	80.579	Nomascus_leucogenys
ENSPTIG00000015467	ZNF408	99	63.586	ENSOPRG00000009225	ZNF408	99	62.621	Ochotona_princeps
ENSPTIG00000015467	ZNF408	100	76.000	ENSOCUG00000010953	ZNF408	100	76.000	Oryctolagus_cuniculus
ENSPTIG00000015467	ZNF408	86	83.146	ENSOGAG00000034080	ZNF408	100	83.146	Otolemur_garnettii
ENSPTIG00000015467	ZNF408	99	81.564	ENSPPAG00000034993	ZNF408	100	81.405	Pan_paniscus
ENSPTIG00000015467	ZNF408	100	98.897	ENSPPRG00000016866	ZNF408	100	98.897	Panthera_pardus
ENSPTIG00000015467	ZNF408	99	81.844	ENSPTRG00000003551	ZNF408	100	81.680	Pan_troglodytes
ENSPTIG00000015467	ZNF408	77	72.122	ENSPEMG00000016757	Zfp408	99	71.480	Peromyscus_maniculatus_bairdii
ENSPTIG00000015467	ZNF408	94	34.605	ENSPFOG00000001760	-	90	49.602	Poecilia_formosa
ENSPTIG00000015467	ZNF408	52	48.958	ENSPMEG00000021147	-	70	47.804	Poecilia_mexicana
ENSPTIG00000015467	ZNF408	94	34.973	ENSPREG00000017068	-	82	37.380	Poecilia_reticulata
ENSPTIG00000015467	ZNF408	99	79.888	ENSPPYG00000003318	ZNF408	100	80.890	Pongo_abelii
ENSPTIG00000015467	ZNF408	100	75.586	ENSPCAG00000014001	ZNF408	100	76.000	Procavia_capensis
ENSPTIG00000015467	ZNF408	99	84.218	ENSPCOG00000028698	ZNF408	100	84.022	Propithecus_coquereli
ENSPTIG00000015467	ZNF408	100	83.724	ENSPVAG00000015791	ZNF408	100	82.483	Pteropus_vampyrus
ENSPTIG00000015467	ZNF408	99	79.050	ENSSBOG00000033023	ZNF408	100	78.788	Saimiri_boliviensis_boliviensis
ENSPTIG00000015467	ZNF408	100	82.483	ENSSSCG00000023097	ZNF408	97	82.483	Sus_scrofa
ENSPTIG00000015467	ZNF408	75	87.259	ENSTBEG00000004260	ZNF408	77	96.313	Tupaia_belangeri
ENSPTIG00000015467	ZNF408	100	88.138	ENSUAMG00000026154	ZNF408	100	88.138	Ursus_americanus
ENSPTIG00000015467	ZNF408	100	87.862	ENSUMAG00000014405	ZNF408	100	87.862	Ursus_maritimus
ENSPTIG00000015467	ZNF408	100	88.477	ENSVVUG00000026805	ZNF408	97	88.203	Vulpes_vulpes
ENSPTIG00000015467	ZNF408	51	56.201	ENSXETG00000001980	znf408	100	54.881	Xenopus_tropicalis
ENSPTIG00000015467	ZNF408	52	48.947	ENSXCOG00000002869	-	73	48.031	Xiphophorus_couchianus
ENSPTIG00000015467	ZNF408	52	49.215	ENSXMAG00000018347	-	70	49.326	Xiphophorus_maculatus