EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSPTIG00000015468 (Gene tree)
Gene ID
102952126
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Panthera_tigris_altaica
Status
putative
Strand
Plus strand
Length
38883 bases
Position
chrKE721675.1:643684-682566
Accession
102952126
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPTIP00000016839CSDPF00313.224e-8515
ENSPTIP00000016839CSDPF00313.224e-8525
ENSPTIP00000016839CSDPF00313.224e-8535
ENSPTIP00000016839CSDPF00313.224e-8545
ENSPTIP00000016839CSDPF00313.224e-8555
ENSPTIP00000016868CSDPF00313.225.8e-8515
ENSPTIP00000016868CSDPF00313.225.8e-8525
ENSPTIP00000016868CSDPF00313.225.8e-8535
ENSPTIP00000016868CSDPF00313.225.8e-8545
ENSPTIP00000016868CSDPF00313.225.8e-8555
ENSPTIP00000016859CSDPF00313.227.2e-8515
ENSPTIP00000016859CSDPF00313.227.2e-8525
ENSPTIP00000016859CSDPF00313.227.2e-8535
ENSPTIP00000016859CSDPF00313.227.2e-8545
ENSPTIP00000016859CSDPF00313.227.2e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPTIT00000021044CSDE1-2024313XM_007076337ENSPTIP00000016859844 (aa)XP_007076399UPI00042C137C
ENSPTIT00000021052CSDE1-2034220XM_007076339ENSPTIP00000016868813 (aa)XP_007076401UPI00042C1463
ENSPTIT00000021023CSDE1-2014232XM_007076340ENSPTIP00000016839798 (aa)XP_007076402UPI0003444700
Gene Model
Click here to download ENSPTIG00000015468's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015468's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPTIG00000015468CSDE110099.373ENSG00000009307CSDE1100100.000Homo_sapiens
ENSPTIG00000015468CSDE110075.732ENSAPOG00000015538csde110077.922Acanthochromis_polyacanthus
ENSPTIG00000015468CSDE110098.526ENSAMEG00000017129CSDE110098.526Ailuropoda_melanoleuca
ENSPTIG00000015468CSDE19177.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSPTIG00000015468CSDE110075.854ENSAOCG00000011510csde110078.052Amphiprion_ocellaris
ENSPTIG00000015468CSDE110077.653ENSAPEG00000007194csde110078.052Amphiprion_percula
ENSPTIG00000015468CSDE110074.657ENSATEG00000003864csde110077.662Anabas_testudineus
ENSPTIG00000015468CSDE110088.346ENSAPLG00000008797CSDE110091.917Anas_platyrhynchos
ENSPTIG00000015468CSDE110092.105ENSACAG00000003120CSDE110092.105Anolis_carolinensis
ENSPTIG00000015468CSDE110098.997ENSANAG00000024665CSDE110098.934Aotus_nancymaae
ENSPTIG00000015468CSDE18773.050ENSANAG00000028396-9173.810Aotus_nancymaae
ENSPTIG00000015468CSDE110077.250ENSACLG00000013296csde110077.633Astatotilapia_calliptera
ENSPTIG00000015468CSDE110074.314ENSAMXG00000007436csde110077.302Astyanax_mexicanus
ENSPTIG00000015468CSDE110099.052ENSBTAG00000000678CSDE110099.052Bos_taurus
ENSPTIG00000015468CSDE110099.123ENSCJAG00000012565CSDE110099.052Callithrix_jacchus
ENSPTIG00000015468CSDE19899.749ENSCAFG00000009618CSDE110099.749Canis_familiaris
ENSPTIG00000015468CSDE110095.865ENSCAFG00020000481CSDE110099.739Canis_lupus_dingo
ENSPTIG00000015468CSDE110098.997ENSCHIG00000017250CSDE110098.957Capra_hircus
ENSPTIG00000015468CSDE110098.747ENSTSYG00000003747CSDE110098.747Carlito_syrichta
ENSPTIG00000015468CSDE110091.813ENSCAPG00000015128CSDE110091.813Cavia_aperea
ENSPTIG00000015468CSDE110093.734ENSCPOG00000040388CSDE110093.734Cavia_porcellus
ENSPTIG00000015468CSDE110099.123ENSCCAG00000036794CSDE110099.123Cebus_capucinus
ENSPTIG00000015468CSDE19576.733ENSCCAG00000033677-9976.247Cebus_capucinus
ENSPTIG00000015468CSDE19773.942ENSCCAG00000030878-9173.942Cebus_capucinus
ENSPTIG00000015468CSDE110099.373ENSCATG00000036962CSDE110099.289Cercocebus_atys
ENSPTIG00000015468CSDE110099.123ENSCLAG00000006618CSDE110099.123Chinchilla_lanigera
ENSPTIG00000015468CSDE110099.373ENSCSAG00000001658CSDE110099.289Chlorocebus_sabaeus
ENSPTIG00000015468CSDE110099.080ENSCHOG00000000918CSDE19199.080Choloepus_hoffmanni
ENSPTIG00000015468CSDE110092.607ENSCPBG00000016547CSDE110092.607Chrysemys_picta_bellii
ENSPTIG00000015468CSDE19743.276ENSCING00000014465-9643.276Ciona_intestinalis
ENSPTIG00000015468CSDE19642.627ENSCSAVG00000008100-9842.627Ciona_savignyi
ENSPTIG00000015468CSDE19993.370ENSCANG00000031069-9993.370Colobus_angolensis_palliatus
ENSPTIG00000015468CSDE110099.373ENSCANG00000035096CSDE110099.171Colobus_angolensis_palliatus
ENSPTIG00000015468CSDE110098.747ENSCGRG00001016833-10098.747Cricetulus_griseus_chok1gshd
ENSPTIG00000015468CSDE110078.321ENSCGRG00001014011-10081.486Cricetulus_griseus_chok1gshd
ENSPTIG00000015468CSDE19484.783ENSCGRG00000005831-10084.783Cricetulus_griseus_crigri
ENSPTIG00000015468CSDE19798.664ENSCGRG00000002225-10098.664Cricetulus_griseus_crigri
ENSPTIG00000015468CSDE110074.970ENSCSEG00000002620csde110077.503Cynoglossus_semilaevis
ENSPTIG00000015468CSDE110076.875ENSCVAG00000001344csde110077.013Cyprinodon_variegatus
ENSPTIG00000015468CSDE110077.903ENSDARG00000074758csde110077.903Danio_rerio
ENSPTIG00000015468CSDE17570.722ENSDNOG00000034464-10073.043Dasypus_novemcinctus
ENSPTIG00000015468CSDE110094.869ENSDNOG00000010287-9498.316Dasypus_novemcinctus
ENSPTIG00000015468CSDE110098.246ENSDORG00000011609Csde110098.353Dipodomys_ordii
ENSPTIG00000015468CSDE19549.388FBgn0263352Unr7348.795Drosophila_melanogaster
ENSPTIG00000015468CSDE19974.279ENSETEG00000013678-9977.285Echinops_telfairi
ENSPTIG00000015468CSDE19083.409ENSETEG00000006280-10087.500Echinops_telfairi
ENSPTIG00000015468CSDE17668.543ENSETEG00000007109-9968.543Echinops_telfairi
ENSPTIG00000015468CSDE19498.347ENSETEG00000002491-8098.347Echinops_telfairi
ENSPTIG00000015468CSDE19955.897ENSEBUG00000008647csde19954.167Eptatretus_burgeri
ENSPTIG00000015468CSDE110099.499ENSEASG00005006284CSDE110099.499Equus_asinus_asinus
ENSPTIG00000015468CSDE110099.499ENSECAG00000020885CSDE110099.499Equus_caballus
ENSPTIG00000015468CSDE19399.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSPTIG00000015468CSDE110074.275ENSELUG00000015507csde110076.067Esox_lucius
ENSPTIG00000015468CSDE1100100.000ENSFCAG00000029266CSDE1100100.000Felis_catus
ENSPTIG00000015468CSDE110091.980ENSFALG00000003407CSDE110091.980Ficedula_albicollis
ENSPTIG00000015468CSDE110098.872ENSFDAG00000007882CSDE110098.952Fukomys_damarensis
ENSPTIG00000015468CSDE110077.029ENSFHEG00000010799csde110077.029Fundulus_heteroclitus
ENSPTIG00000015468CSDE19977.096ENSGMOG00000012731csde110077.096Gadus_morhua
ENSPTIG00000015468CSDE19892.199ENSGALG00000002139CSDE19892.199Gallus_gallus
ENSPTIG00000015468CSDE19373.217ENSGAFG00000005241csde19576.677Gambusia_affinis
ENSPTIG00000015468CSDE19977.875ENSGACG00000004544csde110077.875Gasterosteus_aculeatus
ENSPTIG00000015468CSDE110092.231ENSGAGG00000017685CSDE110092.231Gopherus_agassizii
ENSPTIG00000015468CSDE110099.373ENSGGOG00000002164CSDE110099.348Gorilla_gorilla
ENSPTIG00000015468CSDE110076.617ENSHBUG00000020315csde110077.633Haplochromis_burtoni
ENSPTIG00000015468CSDE19980.427ENSHGLG00000000650-9980.427Heterocephalus_glaber_female
ENSPTIG00000015468CSDE110082.456ENSHGLG00000019549-10082.456Heterocephalus_glaber_female
ENSPTIG00000015468CSDE19983.207ENSHGLG00000007471-9885.414Heterocephalus_glaber_female
ENSPTIG00000015468CSDE19989.458ENSHGLG00000008555-10089.521Heterocephalus_glaber_female
ENSPTIG00000015468CSDE110085.965ENSHGLG00000003829-10089.439Heterocephalus_glaber_female
ENSPTIG00000015468CSDE19690.200ENSHGLG00000010039-10090.200Heterocephalus_glaber_female
ENSPTIG00000015468CSDE110089.474ENSHGLG00000009620-10089.724Heterocephalus_glaber_female
ENSPTIG00000015468CSDE110081.454ENSHGLG00100012072-10084.746Heterocephalus_glaber_male
ENSPTIG00000015468CSDE110077.444ENSHGLG00100001846-10080.339Heterocephalus_glaber_male
ENSPTIG00000015468CSDE19480.749ENSHGLG00100004195-10084.240Heterocephalus_glaber_male
ENSPTIG00000015468CSDE19689.978ENSHGLG00100006910-10089.978Heterocephalus_glaber_male
ENSPTIG00000015468CSDE19782.405ENSHGLG00100004833-10082.405Heterocephalus_glaber_male
ENSPTIG00000015468CSDE19980.682ENSHGLG00100007287-9882.786Heterocephalus_glaber_male
ENSPTIG00000015468CSDE110099.123ENSHGLG00100019438-10099.123Heterocephalus_glaber_male
ENSPTIG00000015468CSDE19984.731ENSHGLG00100002245-9984.731Heterocephalus_glaber_male
ENSPTIG00000015468CSDE110076.250ENSHCOG00000004158csde110076.593Hippocampus_comes
ENSPTIG00000015468CSDE110074.065ENSIPUG00000000355csde110077.043Ictalurus_punctatus
ENSPTIG00000015468CSDE18682.460ENSSTOG00000032722-9882.460Ictidomys_tridecemlineatus
ENSPTIG00000015468CSDE110080.025ENSSTOG00000030994-10080.563Ictidomys_tridecemlineatus
ENSPTIG00000015468CSDE110098.496ENSJJAG00000019571Csde110098.503Jaculus_jaculus
ENSPTIG00000015468CSDE110076.894ENSKMAG00000005685csde110076.514Kryptolebias_marmoratus
ENSPTIG00000015468CSDE110075.610ENSLBEG00000014770csde110077.792Labrus_bergylta
ENSPTIG00000015468CSDE110080.149ENSLACG00000018452CSDE19679.537Latimeria_chalumnae
ENSPTIG00000015468CSDE110080.350ENSLOCG00000010413csde19680.320Lepisosteus_oculatus
ENSPTIG00000015468CSDE110093.985ENSLAFG00000007150CSDE19697.406Loxodonta_africana
ENSPTIG00000015468CSDE110099.373ENSMFAG00000003674CSDE110099.348Macaca_fascicularis
ENSPTIG00000015468CSDE110099.373ENSMMUG00000001974CSDE110099.348Macaca_mulatta
ENSPTIG00000015468CSDE110099.373ENSMNEG00000045247CSDE110099.289Macaca_nemestrina
ENSPTIG00000015468CSDE110099.123ENSMLEG00000038673CSDE110099.052Mandrillus_leucophaeus
ENSPTIG00000015468CSDE110076.463ENSMAMG00000008821csde110078.571Mastacembelus_armatus
ENSPTIG00000015468CSDE110077.250ENSMZEG00005021675csde110077.633Maylandia_zebra
ENSPTIG00000015468CSDE19892.072ENSMGAG00000016381CSDE110091.667Meleagris_gallopavo
ENSPTIG00000015468CSDE110098.747ENSMAUG00000014031Csde110098.802Mesocricetus_auratus
ENSPTIG00000015468CSDE110098.647ENSMICG00000002050CSDE110098.647Microcebus_murinus
ENSPTIG00000015468CSDE110098.747ENSMOCG00000018960Csde110098.747Microtus_ochrogaster
ENSPTIG00000015468CSDE110074.906ENSMMOG00000015075csde110077.922Mola_mola
ENSPTIG00000015468CSDE110096.115ENSMODG00000004685CSDE110096.115Monodelphis_domestica
ENSPTIG00000015468CSDE110075.031ENSMALG00000007132csde110078.052Monopterus_albus
ENSPTIG00000015468CSDE110098.496MGP_CAROLIEiJ_G0025444Csde110098.496Mus_caroli
ENSPTIG00000015468CSDE110098.622ENSMUSG00000068823Csde110098.653Mus_musculus
ENSPTIG00000015468CSDE110098.872MGP_PahariEiJ_G0026888Csde110098.872Mus_pahari
ENSPTIG00000015468CSDE110098.872MGP_SPRETEiJ_G0026394Csde110098.872Mus_spretus
ENSPTIG00000015468CSDE198100.000ENSMPUG00000005753CSDE199100.000Mustela_putorius_furo
ENSPTIG00000015468CSDE110098.155ENSMLUG00000005681CSDE110098.155Myotis_lucifugus
ENSPTIG00000015468CSDE19771.269ENSNGAG00000012599-10071.269Nannospalax_galili
ENSPTIG00000015468CSDE110098.622ENSNGAG00000021929Csde110098.653Nannospalax_galili
ENSPTIG00000015468CSDE110074.625ENSNBRG00000020808csde110077.633Neolamprologus_brichardi
ENSPTIG00000015468CSDE110099.248ENSNLEG00000004842CSDE110099.171Nomascus_leucogenys
ENSPTIG00000015468CSDE19897.087ENSMEUG00000002677CSDE19697.087Notamacropus_eugenii
ENSPTIG00000015468CSDE19899.029ENSOPRG00000005002CSDE18894.444Ochotona_princeps
ENSPTIG00000015468CSDE19767.920ENSODEG00000005979-9867.920Octodon_degus
ENSPTIG00000015468CSDE110098.496ENSODEG00000007383-10098.653Octodon_degus
ENSPTIG00000015468CSDE110075.458ENSONIG00000009309csde110075.458Oreochromis_niloticus
ENSPTIG00000015468CSDE110080.050ENSOANG00000003346-10080.050Ornithorhynchus_anatinus
ENSPTIG00000015468CSDE110098.872ENSOCUG00000016438CSDE110098.460Oryctolagus_cuniculus
ENSPTIG00000015468CSDE110075.458ENSORLG00000000707csde110077.763Oryzias_latipes
ENSPTIG00000015468CSDE110077.250ENSORLG00020005148csde110075.458Oryzias_latipes_hni
ENSPTIG00000015468CSDE110077.250ENSORLG00015019415csde110077.763Oryzias_latipes_hsok
ENSPTIG00000015468CSDE110077.903ENSOMEG00000015656csde110078.442Oryzias_melastigma
ENSPTIG00000015468CSDE110099.139ENSOGAG00000012127CSDE110099.139Otolemur_garnettii
ENSPTIG00000015468CSDE110099.016ENSOARG00000020034CSDE110099.016Ovis_aries
ENSPTIG00000015468CSDE110099.373ENSPPAG00000025861CSDE110099.348Pan_paniscus
ENSPTIG00000015468CSDE1100100.000ENSPPRG00000006747CSDE1100100.000Panthera_pardus
ENSPTIG00000015468CSDE110099.373ENSPTRG00000033721CSDE110099.373Pan_troglodytes
ENSPTIG00000015468CSDE110099.373ENSPANG00000018873CSDE110099.348Papio_anubis
ENSPTIG00000015468CSDE110074.375ENSPKIG00000009459csde110077.373Paramormyrops_kingsleyae
ENSPTIG00000015468CSDE19695.575ENSPSIG00000003823CSDE19695.575Pelodiscus_sinensis
ENSPTIG00000015468CSDE110074.532ENSPMGG00000000772csde110077.532Periophthalmus_magnuspinnatus
ENSPTIG00000015468CSDE110098.747ENSPEMG00000020357-10098.802Peromyscus_maniculatus_bairdii
ENSPTIG00000015468CSDE110096.241ENSPCIG00000022587CSDE110096.241Phascolarctos_cinereus
ENSPTIG00000015468CSDE19975.466ENSPFOG00000012664csde110075.932Poecilia_formosa
ENSPTIG00000015468CSDE19771.429ENSPLAG00000017680csde19371.429Poecilia_latipinna
ENSPTIG00000015468CSDE19871.320ENSPMEG00000005094csde19671.320Poecilia_mexicana
ENSPTIG00000015468CSDE110076.398ENSPREG00000011631csde110074.190Poecilia_reticulata
ENSPTIG00000015468CSDE110099.248ENSPPYG00000000996CSDE110099.248Pongo_abelii
ENSPTIG00000015468CSDE1100100.000ENSPCAG00000014368CSDE19698.574Procavia_capensis
ENSPTIG00000015468CSDE19083.955ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSPTIG00000015468CSDE110099.248ENSPCOG00000017893CSDE110099.348Propithecus_coquereli
ENSPTIG00000015468CSDE110092.989ENSPVAG00000008225CSDE110092.989Pteropus_vampyrus
ENSPTIG00000015468CSDE110076.617ENSPNYG00000013745csde110077.633Pundamilia_nyererei
ENSPTIG00000015468CSDE110077.403ENSPNAG00000001958csde110077.792Pygocentrus_nattereri
ENSPTIG00000015468CSDE110098.747ENSRNOG00000061058Csde110098.747Rattus_norvegicus
ENSPTIG00000015468CSDE110093.865ENSRBIG00000038966-10093.865Rhinopithecus_bieti
ENSPTIG00000015468CSDE110095.489ENSRBIG00000038088-9997.696Rhinopithecus_bieti
ENSPTIG00000015468CSDE110099.373ENSRROG00000043101CSDE110099.289Rhinopithecus_roxellana
ENSPTIG00000015468CSDE110099.123ENSSBOG00000035592CSDE110099.052Saimiri_boliviensis_boliviensis
ENSPTIG00000015468CSDE110093.995ENSSHAG00000009831CSDE110095.958Sarcophilus_harrisii
ENSPTIG00000015468CSDE110076.368ENSSFOG00015007498csde110077.143Scleropages_formosus
ENSPTIG00000015468CSDE110076.098ENSSMAG00000007203csde110078.442Scophthalmus_maximus
ENSPTIG00000015468CSDE110075.732ENSSDUG00000015380csde110077.922Seriola_dumerili
ENSPTIG00000015468CSDE110077.528ENSSLDG00000008819csde110077.922Seriola_lalandi_dorsalis
ENSPTIG00000015468CSDE110097.052ENSSARG00000000738CSDE110097.052Sorex_araneus
ENSPTIG00000015468CSDE110091.980ENSSPUG00000008714CSDE110091.980Sphenodon_punctatus
ENSPTIG00000015468CSDE110077.403ENSSPAG00000000716csde110077.792Stegastes_partitus
ENSPTIG00000015468CSDE110099.499ENSSSCG00000006752CSDE110099.478Sus_scrofa
ENSPTIG00000015468CSDE110091.000ENSTGUG00000000972CSDE110091.000Taeniopygia_guttata
ENSPTIG00000015468CSDE110071.875ENSTRUG00000007996csde110074.772Takifugu_rubripes
ENSPTIG00000015468CSDE19381.369ENSTNIG00000010878csde110081.369Tetraodon_nigroviridis
ENSPTIG00000015468CSDE19398.718ENSTBEG00000011880-6798.718Tupaia_belangeri
ENSPTIG00000015468CSDE110098.647ENSTTRG00000015583CSDE110098.647Tursiops_truncatus
ENSPTIG00000015468CSDE189100.000ENSUAMG00000021779-10099.357Ursus_americanus
ENSPTIG00000015468CSDE19090.798ENSUAMG00000024289-9995.330Ursus_americanus
ENSPTIG00000015468CSDE110088.596ENSUMAG00000009720-9891.829Ursus_maritimus
ENSPTIG00000015468CSDE197100.000ENSUMAG00000011714-99100.000Ursus_maritimus
ENSPTIG00000015468CSDE110098.592ENSVPAG00000000749CSDE18598.592Vicugna_pacos
ENSPTIG00000015468CSDE19099.708ENSVVUG00000009890CSDE19499.708Vulpes_vulpes
ENSPTIG00000015468CSDE110085.893ENSXETG00000021448csde110085.893Xenopus_tropicalis
ENSPTIG00000015468CSDE19285.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSPTIG00000015468CSDE110077.625ENSXMAG00000009080csde19877.984Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us