EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015527 (Gene tree)
Gene ID: 102962071
Gene Symbol: YTHDC1
Alias: -
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 25170 bases
Position: chrKE721847.1:3701210-3726379
Accession: 102962071
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017002	YTH	PF04146.15	3.8e-40	1	1
ENSPTIP00000016997	YTH	PF04146.15	4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021183	YTHDC1-201	2184	XM_007086960	ENSPTIP00000016997	727 (aa)	XP_007087022	-
ENSPTIT00000021188	YTHDC1-202	2106	-	ENSPTIP00000017002	701 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000015527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015527	YTHDC1	100	97.115	ENSG00000083896	YTHDC1	99	97.115	Homo_sapiens
ENSPTIG00000015527	YTHDC1	58	59.338	ENSAPOG00000013997	ythdc1	57	61.792	Acanthochromis_polyacanthus
ENSPTIG00000015527	YTHDC1	100	98.214	ENSAMEG00000005688	YTHDC1	99	98.214	Ailuropoda_melanoleuca
ENSPTIG00000015527	YTHDC1	82	53.254	ENSACIG00000019728	ythdc1	78	59.148	Amphilophus_citrinellus
ENSPTIG00000015527	YTHDC1	58	60.360	ENSAOCG00000000239	ythdc1	59	66.986	Amphiprion_ocellaris
ENSPTIG00000015527	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.376	Amphiprion_percula
ENSPTIG00000015527	YTHDC1	93	83.680	ENSAPLG00000009921	YTHDC1	60	94.614	Anas_platyrhynchos
ENSPTIG00000015527	YTHDC1	93	82.789	ENSACAG00000009697	YTHDC1	91	82.789	Anolis_carolinensis
ENSPTIG00000015527	YTHDC1	100	97.253	ENSANAG00000001522	YTHDC1	99	97.253	Aotus_nancymaae
ENSPTIG00000015527	YTHDC1	58	59.234	ENSACLG00000019371	ythdc1	59	65.550	Astatotilapia_calliptera
ENSPTIG00000015527	YTHDC1	92	64.820	ENSAMXG00000006978	ythdc1	91	65.414	Astyanax_mexicanus
ENSPTIG00000015527	YTHDC1	100	96.424	ENSBTAG00000015572	YTHDC1	99	96.424	Bos_taurus
ENSPTIG00000015527	YTHDC1	100	97.436	ENSCJAG00000009934	YTHDC1	99	97.436	Callithrix_jacchus
ENSPTIG00000015527	YTHDC1	100	98.077	ENSCAFG00000002821	YTHDC1	99	98.077	Canis_familiaris
ENSPTIG00000015527	YTHDC1	100	98.077	ENSCAFG00020027112	YTHDC1	99	98.077	Canis_lupus_dingo
ENSPTIG00000015527	YTHDC1	100	91.059	ENSCHIG00000004810	YTHDC1	98	91.059	Capra_hircus
ENSPTIG00000015527	YTHDC1	100	97.293	ENSTSYG00000011668	YTHDC1	99	97.293	Carlito_syrichta
ENSPTIG00000015527	YTHDC1	91	68.847	ENSCAPG00000008722	YTHDC1	90	67.916	Cavia_aperea
ENSPTIG00000015527	YTHDC1	100	89.601	ENSCPOG00000010929	YTHDC1	99	89.011	Cavia_porcellus
ENSPTIG00000015527	YTHDC1	100	97.151	ENSCCAG00000035754	YTHDC1	99	97.151	Cebus_capucinus
ENSPTIG00000015527	YTHDC1	100	97.390	ENSCATG00000036320	YTHDC1	99	97.390	Cercocebus_atys
ENSPTIG00000015527	YTHDC1	93	94.799	ENSCLAG00000005482	YTHDC1	92	93.759	Chinchilla_lanigera
ENSPTIG00000015527	YTHDC1	100	96.154	ENSCSAG00000005252	YTHDC1	99	96.154	Chlorocebus_sabaeus
ENSPTIG00000015527	YTHDC1	93	85.757	ENSCPBG00000021965	YTHDC1	94	86.018	Chrysemys_picta_bellii
ENSPTIG00000015527	YTHDC1	100	97.390	ENSCANG00000004769	YTHDC1	99	97.390	Colobus_angolensis_palliatus
ENSPTIG00000015527	YTHDC1	100	92.170	ENSCGRG00001000816	Ythdc1	99	92.170	Cricetulus_griseus_chok1gshd
ENSPTIG00000015527	YTHDC1	100	94.643	ENSCGRG00000009807	Ythdc1	99	94.643	Cricetulus_griseus_crigri
ENSPTIG00000015527	YTHDC1	58	59.307	ENSCSEG00000020404	ythdc1	59	66.187	Cynoglossus_semilaevis
ENSPTIG00000015527	YTHDC1	58	58.606	ENSCVAG00000022349	ythdc1	59	66.024	Cyprinodon_variegatus
ENSPTIG00000015527	YTHDC1	92	63.939	ENSDARG00000051953	ythdc1	58	78.624	Danio_rerio
ENSPTIG00000015527	YTHDC1	100	94.787	ENSDNOG00000004949	YTHDC1	99	94.787	Dasypus_novemcinctus
ENSPTIG00000015527	YTHDC1	100	96.836	ENSDORG00000013045	Ythdc1	100	96.719	Dipodomys_ordii
ENSPTIG00000015527	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSPTIG00000015527	YTHDC1	100	97.802	ENSEASG00005018383	YTHDC1	100	97.671	Equus_asinus_asinus
ENSPTIG00000015527	YTHDC1	100	97.527	ENSECAG00000018303	YTHDC1	100	98.487	Equus_caballus
ENSPTIG00000015527	YTHDC1	93	94.502	ENSEEUG00000015466	YTHDC1	91	93.908	Erinaceus_europaeus
ENSPTIG00000015527	YTHDC1	92	63.181	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSPTIG00000015527	YTHDC1	100	99.572	ENSFCAG00000026791	YTHDC1	99	99.572	Felis_catus
ENSPTIG00000015527	YTHDC1	68	87.613	ENSFALG00000006581	YTHDC1	85	95.000	Ficedula_albicollis
ENSPTIG00000015527	YTHDC1	100	96.296	ENSFDAG00000018560	YTHDC1	100	96.296	Fukomys_damarensis
ENSPTIG00000015527	YTHDC1	65	67.925	ENSFHEG00000001286	ythdc1	60	53.846	Fundulus_heteroclitus
ENSPTIG00000015527	YTHDC1	64	63.830	ENSGMOG00000018815	ythdc1	78	62.278	Gadus_morhua
ENSPTIG00000015527	YTHDC1	93	84.570	ENSGALG00000035906	YTHDC1	85	84.421	Gallus_gallus
ENSPTIG00000015527	YTHDC1	50	66.058	ENSGAFG00000001759	ythdc1	50	67.969	Gambusia_affinis
ENSPTIG00000015527	YTHDC1	58	62.558	ENSGACG00000015486	ythdc1	57	62.287	Gasterosteus_aculeatus
ENSPTIG00000015527	YTHDC1	93	86.647	ENSGAGG00000007108	YTHDC1	91	86.499	Gopherus_agassizii
ENSPTIG00000015527	YTHDC1	100	97.253	ENSGGOG00000021958	YTHDC1	99	97.253	Gorilla_gorilla
ENSPTIG00000015527	YTHDC1	58	58.559	ENSHBUG00000019288	ythdc1	59	65.550	Haplochromis_burtoni
ENSPTIG00000015527	YTHDC1	100	96.154	ENSHGLG00000006319	-	99	96.154	Heterocephalus_glaber_female
ENSPTIG00000015527	YTHDC1	95	68.841	ENSHGLG00000003239	-	57	75.822	Heterocephalus_glaber_female
ENSPTIG00000015527	YTHDC1	95	68.398	ENSHGLG00100008060	-	57	73.427	Heterocephalus_glaber_male
ENSPTIG00000015527	YTHDC1	100	95.604	ENSHGLG00100001556	-	99	95.604	Heterocephalus_glaber_male
ENSPTIG00000015527	YTHDC1	53	67.568	ENSHCOG00000001520	ythdc1	82	67.568	Hippocampus_comes
ENSPTIG00000015527	YTHDC1	93	66.521	ENSIPUG00000018136	ythdc1	61	82.232	Ictalurus_punctatus
ENSPTIG00000015527	YTHDC1	100	97.253	ENSSTOG00000013652	YTHDC1	99	97.253	Ictidomys_tridecemlineatus
ENSPTIG00000015527	YTHDC1	93	90.788	ENSJJAG00000010268	Ythdc1	92	91.233	Jaculus_jaculus
ENSPTIG00000015527	YTHDC1	58	59.193	ENSKMAG00000006483	ythdc1	85	64.524	Kryptolebias_marmoratus
ENSPTIG00000015527	YTHDC1	63	63.235	ENSLBEG00000020831	ythdc1	71	73.529	Labrus_bergylta
ENSPTIG00000015527	YTHDC1	88	73.725	ENSLACG00000004893	YTHDC1	92	73.960	Latimeria_chalumnae
ENSPTIG00000015527	YTHDC1	93	73.077	ENSLOCG00000003045	ythdc1	90	87.028	Lepisosteus_oculatus
ENSPTIG00000015527	YTHDC1	100	96.016	ENSLAFG00000021592	YTHDC1	99	98.599	Loxodonta_africana
ENSPTIG00000015527	YTHDC1	100	97.390	ENSMFAG00000031927	YTHDC1	99	97.390	Macaca_fascicularis
ENSPTIG00000015527	YTHDC1	100	97.390	ENSMMUG00000002265	YTHDC1	99	97.390	Macaca_mulatta
ENSPTIG00000015527	YTHDC1	100	97.390	ENSMNEG00000033751	YTHDC1	99	97.390	Macaca_nemestrina
ENSPTIG00000015527	YTHDC1	100	97.390	ENSMLEG00000042147	YTHDC1	99	97.390	Mandrillus_leucophaeus
ENSPTIG00000015527	YTHDC1	56	61.871	ENSMAMG00000013122	ythdc1	58	66.110	Mastacembelus_armatus
ENSPTIG00000015527	YTHDC1	58	58.559	ENSMZEG00005023173	ythdc1	59	65.550	Maylandia_zebra
ENSPTIG00000015527	YTHDC1	93	82.789	ENSMGAG00000010391	YTHDC1	59	94.379	Meleagris_gallopavo
ENSPTIG00000015527	YTHDC1	93	93.759	ENSMAUG00000001286	Ythdc1	92	93.016	Mesocricetus_auratus
ENSPTIG00000015527	YTHDC1	100	97.390	ENSMICG00000034640	YTHDC1	99	97.390	Microcebus_murinus
ENSPTIG00000015527	YTHDC1	100	95.742	ENSMOCG00000020201	Ythdc1	99	95.742	Microtus_ochrogaster
ENSPTIG00000015527	YTHDC1	96	51.070	ENSMODG00000010076	-	60	60.613	Monodelphis_domestica
ENSPTIG00000015527	YTHDC1	66	57.113	ENSMODG00000009173	-	88	60.664	Monodelphis_domestica
ENSPTIG00000015527	YTHDC1	93	87.519	ENSMODG00000020754	-	91	87.221	Monodelphis_domestica
ENSPTIG00000015527	YTHDC1	86	69.444	ENSMODG00000014337	-	93	70.437	Monodelphis_domestica
ENSPTIG00000015527	YTHDC1	58	69.388	ENSMALG00000013412	ythdc1	56	68.481	Monopterus_albus
ENSPTIG00000015527	YTHDC1	93	94.651	MGP_CAROLIEiJ_G0027347	Ythdc1	93	92.966	Mus_caroli
ENSPTIG00000015527	YTHDC1	93	93.462	ENSMUSG00000035851	Ythdc1	93	92.126	Mus_musculus
ENSPTIG00000015527	YTHDC1	93	93.759	MGP_PahariEiJ_G0017126	Ythdc1	93	92.323	Mus_pahari
ENSPTIG00000015527	YTHDC1	93	93.759	MGP_SPRETEiJ_G0028339	Ythdc1	93	92.323	Mus_spretus
ENSPTIG00000015527	YTHDC1	93	72.485	ENSMPUG00000001743	YTHDC1	53	97.187	Mustela_putorius_furo
ENSPTIG00000015527	YTHDC1	100	96.836	ENSMLUG00000016300	YTHDC1	100	96.836	Myotis_lucifugus
ENSPTIG00000015527	YTHDC1	60	91.943	ENSNGAG00000024000	Ythdc1	93	91.017	Nannospalax_galili
ENSPTIG00000015527	YTHDC1	61	61.747	ENSNBRG00000007663	ythdc1	70	65.291	Neolamprologus_brichardi
ENSPTIG00000015527	YTHDC1	100	96.836	ENSNLEG00000009202	YTHDC1	99	96.836	Nomascus_leucogenys
ENSPTIG00000015527	YTHDC1	83	81.271	ENSMEUG00000007128	YTHDC1	81	81.271	Notamacropus_eugenii
ENSPTIG00000015527	YTHDC1	76	97.450	ENSOPRG00000008986	YTHDC1	74	97.450	Ochotona_princeps
ENSPTIG00000015527	YTHDC1	100	95.461	ENSODEG00000001715	YTHDC1	99	95.292	Octodon_degus
ENSPTIG00000015527	YTHDC1	67	73.529	ENSONIG00000012651	ythdc1	64	67.436	Oreochromis_niloticus
ENSPTIG00000015527	YTHDC1	90	76.758	ENSOANG00000014398	YTHDC1	55	96.962	Ornithorhynchus_anatinus
ENSPTIG00000015527	YTHDC1	93	80.207	ENSOCUG00000015886	YTHDC1	56	93.564	Oryctolagus_cuniculus
ENSPTIG00000015527	YTHDC1	56	61.594	ENSORLG00000030544	ythdc1	61	67.303	Oryzias_latipes
ENSPTIG00000015527	YTHDC1	56	60.870	ENSORLG00020019316	ythdc1	61	67.303	Oryzias_latipes_hni
ENSPTIG00000015527	YTHDC1	56	62.255	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSPTIG00000015527	YTHDC1	100	95.879	ENSOGAG00000003362	YTHDC1	99	95.879	Otolemur_garnettii
ENSPTIG00000015527	YTHDC1	100	96.424	ENSOARG00000008633	YTHDC1	99	96.424	Ovis_aries
ENSPTIG00000015527	YTHDC1	100	97.115	ENSPPAG00000041315	YTHDC1	99	97.115	Pan_paniscus
ENSPTIG00000015527	YTHDC1	100	99.725	ENSPPRG00000011979	YTHDC1	99	99.725	Panthera_pardus
ENSPTIG00000015527	YTHDC1	100	97.115	ENSPTRG00000016105	YTHDC1	99	97.115	Pan_troglodytes
ENSPTIG00000015527	YTHDC1	100	97.390	ENSPANG00000021590	YTHDC1	99	97.390	Papio_anubis
ENSPTIG00000015527	YTHDC1	79	83.063	ENSPKIG00000018497	ythdc1	91	68.314	Paramormyrops_kingsleyae
ENSPTIG00000015527	YTHDC1	93	85.015	ENSPSIG00000002782	YTHDC1	92	84.866	Pelodiscus_sinensis
ENSPTIG00000015527	YTHDC1	100	96.016	ENSPEMG00000013850	Ythdc1	100	95.869	Peromyscus_maniculatus_bairdii
ENSPTIG00000015527	YTHDC1	93	87.370	ENSPCIG00000006870	YTHDC1	91	87.790	Phascolarctos_cinereus
ENSPTIG00000015527	YTHDC1	56	60.238	ENSPFOG00000013404	ythdc1	60	64.904	Poecilia_formosa
ENSPTIG00000015527	YTHDC1	62	57.474	ENSPLAG00000011079	ythdc1	85	64.904	Poecilia_latipinna
ENSPTIG00000015527	YTHDC1	56	60.238	ENSPMEG00000009238	ythdc1	60	64.904	Poecilia_mexicana
ENSPTIG00000015527	YTHDC1	77	58.353	ENSPREG00000016973	ythdc1	59	59.799	Poecilia_reticulata
ENSPTIG00000015527	YTHDC1	88	96.106	ENSPPYG00000014726	YTHDC1	100	96.106	Pongo_abelii
ENSPTIG00000015527	YTHDC1	77	88.623	ENSPCAG00000009607	YTHDC1	75	87.126	Procavia_capensis
ENSPTIG00000015527	YTHDC1	100	93.132	ENSPCOG00000019105	YTHDC1	99	93.132	Propithecus_coquereli
ENSPTIG00000015527	YTHDC1	100	94.650	ENSPVAG00000015551	YTHDC1	99	94.650	Pteropus_vampyrus
ENSPTIG00000015527	YTHDC1	58	59.234	ENSPNYG00000011687	ythdc1	59	65.550	Pundamilia_nyererei
ENSPTIG00000015527	YTHDC1	93	68.215	ENSPNAG00000028365	ythdc1	91	68.307	Pygocentrus_nattereri
ENSPTIG00000015527	YTHDC1	93	92.296	ENSRNOG00000001996	Ythdc1	91	92.741	Rattus_norvegicus
ENSPTIG00000015527	YTHDC1	100	92.720	ENSRBIG00000028279	YTHDC1	99	92.720	Rhinopithecus_bieti
ENSPTIG00000015527	YTHDC1	100	97.390	ENSRROG00000035028	YTHDC1	99	97.390	Rhinopithecus_roxellana
ENSPTIG00000015527	YTHDC1	100	97.527	ENSSBOG00000022353	YTHDC1	99	97.527	Saimiri_boliviensis_boliviensis
ENSPTIG00000015527	YTHDC1	93	87.519	ENSSHAG00000002538	YTHDC1	91	87.073	Sarcophilus_harrisii
ENSPTIG00000015527	YTHDC1	93	68.070	ENSSFOG00015003298	ythdc1	60	84.419	Scleropages_formosus
ENSPTIG00000015527	YTHDC1	58	59.251	ENSSMAG00000009086	ythdc1	60	65.228	Scophthalmus_maximus
ENSPTIG00000015527	YTHDC1	56	61.017	ENSSDUG00000022008	ythdc1	59	66.507	Seriola_dumerili
ENSPTIG00000015527	YTHDC1	56	61.017	ENSSLDG00000007926	ythdc1	59	66.507	Seriola_lalandi_dorsalis
ENSPTIG00000015527	YTHDC1	80	97.436	ENSSARG00000010960	YTHDC1	100	97.436	Sorex_araneus
ENSPTIG00000015527	YTHDC1	93	81.093	ENSSPUG00000009357	YTHDC1	90	76.071	Sphenodon_punctatus
ENSPTIG00000015527	YTHDC1	58	61.261	ENSSPAG00000011449	ythdc1	59	66.986	Stegastes_partitus
ENSPTIG00000015527	YTHDC1	100	97.671	ENSSSCG00000035505	YTHDC1	100	97.533	Sus_scrofa
ENSPTIG00000015527	YTHDC1	93	84.570	ENSTGUG00000004452	-	91	84.421	Taeniopygia_guttata
ENSPTIG00000015527	YTHDC1	65	57.737	ENSTRUG00000010142	ythdc1	69	69.231	Takifugu_rubripes
ENSPTIG00000015527	YTHDC1	86	59.275	ENSTNIG00000013243	ythdc1	88	64.384	Tetraodon_nigroviridis
ENSPTIG00000015527	YTHDC1	92	85.522	ENSTBEG00000011546	YTHDC1	91	86.119	Tupaia_belangeri
ENSPTIG00000015527	YTHDC1	100	96.291	ENSTTRG00000005083	YTHDC1	99	96.291	Tursiops_truncatus
ENSPTIG00000015527	YTHDC1	94	99.394	ENSUAMG00000010388	YTHDC1	100	99.394	Ursus_americanus
ENSPTIG00000015527	YTHDC1	100	83.906	ENSUMAG00000013668	YTHDC1	98	83.906	Ursus_maritimus
ENSPTIG00000015527	YTHDC1	100	97.290	ENSVPAG00000009040	YTHDC1	99	97.290	Vicugna_pacos
ENSPTIG00000015527	YTHDC1	100	99.313	ENSVVUG00000005387	YTHDC1	100	98.108	Vulpes_vulpes
ENSPTIG00000015527	YTHDC1	93	72.271	ENSXETG00000017960	ythdc1	91	71.736	Xenopus_tropicalis
ENSPTIG00000015527	YTHDC1	50	52.206	ENSXCOG00000000530	ythdc1	78	54.959	Xiphophorus_couchianus
ENSPTIG00000015527	YTHDC1	58	57.734	ENSXMAG00000005196	ythdc1	61	64.183	Xiphophorus_maculatus