EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015606 (Gene tree)
Gene ID: 102972466
Gene Symbol: PABPN1L
Alias: -
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 2432 bases
Position: chrKE721770.1:745885-748316
Accession: 102972466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017080	RRM_1	PF00076.22	8.7e-17	1	1
ENSPTIP00000017075	RRM_1	PF00076.22	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021263	PABPN1L-201	642	-	ENSPTIP00000017075	214 (aa)	-	-
ENSPTIT00000021269	PABPN1L-202	729	XM_007082854	ENSPTIP00000017080	243 (aa)	XP_007082916	-

Gene Model

Click here to download ENSPTIG00000015606's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03015	mRNA surveillance pathway	KEGG
ptg05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015606's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015606	PABPN1L	100	63.320	ENSG00000205022	PABPN1L	93	65.000	Homo_sapiens
ENSPTIG00000015606	PABPN1L	61	49.686	ENSAOCG00000019844	PABPN1L	71	48.936	Amphiprion_ocellaris
ENSPTIG00000015606	PABPN1L	61	49.686	ENSAPEG00000019534	PABPN1L	71	48.936	Amphiprion_percula
ENSPTIG00000015606	PABPN1L	66	56.173	ENSACAG00000013250	PABPN1L	88	56.173	Anolis_carolinensis
ENSPTIG00000015606	PABPN1L	100	61.569	ENSANAG00000038178	PABPN1L	93	63.672	Aotus_nancymaae
ENSPTIG00000015606	PABPN1L	63	52.147	ENSACLG00000025147	PABPN1L	62	52.761	Astatotilapia_calliptera
ENSPTIG00000015606	PABPN1L	99	65.217	ENSBTAG00000023752	-	93	67.188	Bos_taurus
ENSPTIG00000015606	PABPN1L	97	61.200	ENSCJAG00000045284	PABPN1L	92	64.143	Callithrix_jacchus
ENSPTIG00000015606	PABPN1L	100	64.504	ENSCHIG00000013987	PABPN1L	90	63.359	Capra_hircus
ENSPTIG00000015606	PABPN1L	99	59.848	ENSCAPG00000007240	PABPN1L	98	59.848	Cavia_aperea
ENSPTIG00000015606	PABPN1L	98	62.451	ENSCPOG00000025951	PABPN1L	93	62.109	Cavia_porcellus
ENSPTIG00000015606	PABPN1L	100	61.569	ENSCCAG00000027631	PABPN1L	93	65.234	Cebus_capucinus
ENSPTIG00000015606	PABPN1L	100	64.591	ENSCATG00000031060	PABPN1L	93	64.591	Cercocebus_atys
ENSPTIG00000015606	PABPN1L	98	64.427	ENSCLAG00000000704	PABPN1L	93	63.813	Chinchilla_lanigera
ENSPTIG00000015606	PABPN1L	100	61.172	ENSCSAG00000002881	PABPN1L	93	61.172	Chlorocebus_sabaeus
ENSPTIG00000015606	PABPN1L	65	56.805	ENSCPBG00000023441	PABPN1L	53	56.805	Chrysemys_picta_bellii
ENSPTIG00000015606	PABPN1L	100	61.868	ENSCANG00000039336	PABPN1L	93	65.116	Colobus_angolensis_palliatus
ENSPTIG00000015606	PABPN1L	100	61.479	ENSCGRG00001013211	Pabpn1l	93	61.868	Cricetulus_griseus_chok1gshd
ENSPTIG00000015606	PABPN1L	100	61.479	ENSCGRG00000015868	Pabpn1l	93	61.868	Cricetulus_griseus_crigri
ENSPTIG00000015606	PABPN1L	61	53.503	ENSCSEG00000001142	pabpn1l	62	54.601	Cynoglossus_semilaevis
ENSPTIG00000015606	PABPN1L	61	49.686	ENSCVAG00000015547	PABPN1L	63	51.515	Cyprinodon_variegatus
ENSPTIG00000015606	PABPN1L	89	60.256	ENSDNOG00000034677	PABPN1L	92	61.290	Dasypus_novemcinctus
ENSPTIG00000015606	PABPN1L	100	67.829	ENSEASG00005000777	PABPN1L	97	65.056	Equus_asinus_asinus
ENSPTIG00000015606	PABPN1L	100	67.442	ENSECAG00000000378	PABPN1L	94	67.442	Equus_caballus
ENSPTIG00000015606	PABPN1L	100	62.551	ENSEEUG00000004747	PABPN1L	92	62.551	Erinaceus_europaeus
ENSPTIG00000015606	PABPN1L	61	51.592	ENSELUG00000018385	PABPN1L	63	53.374	Esox_lucius
ENSPTIG00000015606	PABPN1L	99	85.547	ENSFCAG00000010465	PABPN1L	93	85.659	Felis_catus
ENSPTIG00000015606	PABPN1L	61	62.025	ENSFALG00000003319	PABPN1L	65	62.025	Ficedula_albicollis
ENSPTIG00000015606	PABPN1L	98	63.241	ENSFDAG00000021067	PABPN1L	93	63.035	Fukomys_damarensis
ENSPTIG00000015606	PABPN1L	61	51.266	ENSFHEG00000018295	PABPN1L	63	53.659	Fundulus_heteroclitus
ENSPTIG00000015606	PABPN1L	62	47.879	ENSGMOG00000001475	PABPN1L	74	47.179	Gadus_morhua
ENSPTIG00000015606	PABPN1L	61	50.314	ENSGAFG00000012565	PABPN1L	63	52.121	Gambusia_affinis
ENSPTIG00000015606	PABPN1L	61	47.239	ENSGACG00000015428	PABPN1L	68	48.168	Gasterosteus_aculeatus
ENSPTIG00000015606	PABPN1L	66	57.647	ENSGAGG00000010613	PABPN1L	57	57.647	Gopherus_agassizii
ENSPTIG00000015606	PABPN1L	100	64.202	ENSGGOG00000012670	PABPN1L	93	65.504	Gorilla_gorilla
ENSPTIG00000015606	PABPN1L	63	51.829	ENSHBUG00000002388	PABPN1L	63	52.439	Haplochromis_burtoni
ENSPTIG00000015606	PABPN1L	100	64.202	ENSHGLG00000014207	PABPN1L	97	64.591	Heterocephalus_glaber_female
ENSPTIG00000015606	PABPN1L	100	64.202	ENSHGLG00100005230	PABPN1L	97	64.591	Heterocephalus_glaber_male
ENSPTIG00000015606	PABPN1L	64	48.256	ENSHCOG00000004151	PABPN1L	66	48.315	Hippocampus_comes
ENSPTIG00000015606	PABPN1L	56	57.042	ENSIPUG00000023583	PABPN1L	78	57.962	Ictalurus_punctatus
ENSPTIG00000015606	PABPN1L	100	61.538	ENSSTOG00000020814	PABPN1L	94	62.308	Ictidomys_tridecemlineatus
ENSPTIG00000015606	PABPN1L	98	63.710	ENSJJAG00000006433	Pabpn1l	91	63.710	Jaculus_jaculus
ENSPTIG00000015606	PABPN1L	61	50.314	ENSLBEG00000011647	PABPN1L	62	51.744	Labrus_bergylta
ENSPTIG00000015606	PABPN1L	66	65.116	ENSLAFG00000025902	-	69	65.116	Loxodonta_africana
ENSPTIG00000015606	PABPN1L	100	64.981	ENSMFAG00000002924	PABPN1L	93	64.981	Macaca_fascicularis
ENSPTIG00000015606	PABPN1L	100	65.234	ENSMMUG00000012438	PABPN1L	93	65.234	Macaca_mulatta
ENSPTIG00000015606	PABPN1L	100	64.981	ENSMNEG00000044808	PABPN1L	93	64.981	Macaca_nemestrina
ENSPTIG00000015606	PABPN1L	100	64.981	ENSMLEG00000032667	PABPN1L	93	64.981	Mandrillus_leucophaeus
ENSPTIG00000015606	PABPN1L	63	52.147	ENSMZEG00005002186	PABPN1L	62	52.761	Maylandia_zebra
ENSPTIG00000015606	PABPN1L	100	59.922	ENSMAUG00000014032	Pabpn1l	97	60.311	Mesocricetus_auratus
ENSPTIG00000015606	PABPN1L	100	62.692	ENSMICG00000028179	PABPN1L	93	63.813	Microcebus_murinus
ENSPTIG00000015606	PABPN1L	100	59.690	ENSMOCG00000007955	Pabpn1l	93	59.690	Microtus_ochrogaster
ENSPTIG00000015606	PABPN1L	100	49.421	ENSMODG00000003873	-	93	49.421	Monodelphis_domestica
ENSPTIG00000015606	PABPN1L	63	50.000	ENSMALG00000016926	PABPN1L	65	49.708	Monopterus_albus
ENSPTIG00000015606	PABPN1L	100	59.533	MGP_CAROLIEiJ_G0031670	Pabpn1l	93	59.533	Mus_caroli
ENSPTIG00000015606	PABPN1L	100	59.922	ENSMUSG00000069867	Pabpn1l	93	59.922	Mus_musculus
ENSPTIG00000015606	PABPN1L	100	59.922	MGP_PahariEiJ_G0023268	Pabpn1l	93	59.922	Mus_pahari
ENSPTIG00000015606	PABPN1L	100	59.533	MGP_SPRETEiJ_G0032788	Pabpn1l	93	59.533	Mus_spretus
ENSPTIG00000015606	PABPN1L	91	55.645	ENSMLUG00000003228	PABPN1L	84	55.645	Myotis_lucifugus
ENSPTIG00000015606	PABPN1L	100	61.479	ENSNGAG00000023992	Pabpn1l	93	61.479	Nannospalax_galili
ENSPTIG00000015606	PABPN1L	100	62.791	ENSOPRG00000005597	PABPN1L	93	62.791	Ochotona_princeps
ENSPTIG00000015606	PABPN1L	100	59.328	ENSODEG00000004649	PABPN1L	95	59.328	Octodon_degus
ENSPTIG00000015606	PABPN1L	99	55.294	ENSOANG00000013901	PABPN1L	92	55.294	Ornithorhynchus_anatinus
ENSPTIG00000015606	PABPN1L	69	53.409	ENSORLG00000026560	PABPN1L	66	53.409	Oryzias_latipes
ENSPTIG00000015606	PABPN1L	63	55.556	ENSORLG00020015068	PABPN1L	62	55.556	Oryzias_latipes_hni
ENSPTIG00000015606	PABPN1L	69	53.409	ENSORLG00015000397	PABPN1L	66	53.409	Oryzias_latipes_hsok
ENSPTIG00000015606	PABPN1L	100	65.625	ENSOGAG00000000433	PABPN1L	93	65.625	Otolemur_garnettii
ENSPTIG00000015606	PABPN1L	99	62.587	ENSOARG00000013682	PABPN1L	94	64.014	Ovis_aries
ENSPTIG00000015606	PABPN1L	100	63.707	ENSPPAG00000028866	PABPN1L	93	64.615	Pan_paniscus
ENSPTIG00000015606	PABPN1L	99	87.500	ENSPPRG00000015106	PABPN1L	93	87.597	Panthera_pardus
ENSPTIG00000015606	PABPN1L	100	63.707	ENSPTRG00000031120	PABPN1L	93	64.615	Pan_troglodytes
ENSPTIG00000015606	PABPN1L	100	64.591	ENSPANG00000026039	PABPN1L	93	64.591	Papio_anubis
ENSPTIG00000015606	PABPN1L	65	55.747	ENSPSIG00000003404	PABPN1L	89	55.747	Pelodiscus_sinensis
ENSPTIG00000015606	PABPN1L	50	61.417	ENSPMGG00000013927	PABPN1L	64	64.220	Periophthalmus_magnuspinnatus
ENSPTIG00000015606	PABPN1L	100	61.089	ENSPEMG00000016624	Pabpn1l	93	61.089	Peromyscus_maniculatus_bairdii
ENSPTIG00000015606	PABPN1L	51	67.480	ENSPCIG00000007038	-	85	67.480	Phascolarctos_cinereus
ENSPTIG00000015606	PABPN1L	61	50.314	ENSPFOG00000007001	PABPN1L	80	43.000	Poecilia_formosa
ENSPTIG00000015606	PABPN1L	61	50.314	ENSPLAG00000018431	PABPN1L	63	52.121	Poecilia_latipinna
ENSPTIG00000015606	PABPN1L	61	50.314	ENSPMEG00000009108	PABPN1L	63	52.121	Poecilia_mexicana
ENSPTIG00000015606	PABPN1L	100	63.320	ENSPPYG00000007655	PABPN1L	93	65.769	Pongo_abelii
ENSPTIG00000015606	PABPN1L	100	63.813	ENSPCOG00000024077	PABPN1L	93	66.284	Propithecus_coquereli
ENSPTIG00000015606	PABPN1L	100	69.349	ENSPVAG00000002716	PABPN1L	93	70.115	Pteropus_vampyrus
ENSPTIG00000015606	PABPN1L	63	52.147	ENSPNYG00000004803	PABPN1L	62	52.761	Pundamilia_nyererei
ENSPTIG00000015606	PABPN1L	100	60.311	ENSRNOG00000029558	Pabpn1l	93	61.089	Rattus_norvegicus
ENSPTIG00000015606	PABPN1L	100	66.148	ENSRBIG00000030740	PABPN1L	93	66.148	Rhinopithecus_bieti
ENSPTIG00000015606	PABPN1L	100	64.981	ENSRROG00000035483	-	93	64.981	Rhinopithecus_roxellana
ENSPTIG00000015606	PABPN1L	100	65.370	ENSRROG00000032240	-	93	65.370	Rhinopithecus_roxellana
ENSPTIG00000015606	PABPN1L	100	61.961	ENSSBOG00000018410	PABPN1L	93	64.453	Saimiri_boliviensis_boliviensis
ENSPTIG00000015606	PABPN1L	99	48.289	ENSSHAG00000010001	-	92	48.529	Sarcophilus_harrisii
ENSPTIG00000015606	PABPN1L	61	52.532	ENSSMAG00000021348	PABPN1L	64	53.529	Scophthalmus_maximus
ENSPTIG00000015606	PABPN1L	61	49.686	ENSSDUG00000006986	PABPN1L	63	51.515	Seriola_dumerili
ENSPTIG00000015606	PABPN1L	61	50.314	ENSSLDG00000021845	PABPN1L	63	52.121	Seriola_lalandi_dorsalis
ENSPTIG00000015606	PABPN1L	95	51.724	ENSSARG00000005178	-	96	51.724	Sorex_araneus
ENSPTIG00000015606	PABPN1L	63	51.515	ENSSPAG00000017978	PABPN1L	63	51.515	Stegastes_partitus
ENSPTIG00000015606	PABPN1L	98	65.098	ENSSSCG00000036367	PABPN1L	91	66.016	Sus_scrofa
ENSPTIG00000015606	PABPN1L	61	52.201	ENSTRUG00000024725	PABPN1L	80	50.532	Takifugu_rubripes
ENSPTIG00000015606	PABPN1L	99	67.692	ENSTTRG00000004691	PABPN1L	93	69.380	Tursiops_truncatus
ENSPTIG00000015606	PABPN1L	62	51.765	ENSXETG00000011258	pabpn1l	86	51.872	Xenopus_tropicalis