EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015683 (Gene tree)
Gene ID: 102950740
Gene Symbol: XRN2
Alias: -
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 77797 bases
Position: chrKE722241.1:4720798-4798594
Accession: 102950740
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017184	XRN_N	PF03159.18	2e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021387	XRN2-201	2850	XM_015543993	ENSPTIP00000017184	949 (aa)	XP_015399479	-

Gene Model

Click here to download ENSPTIG00000015683's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015683's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015683	XRN2	97	97.730	ENSG00000088930	XRN2	97	97.730	Homo_sapiens
ENSPTIG00000015683	XRN2	94	70.897	ENSAPOG00000009818	xrn2	97	69.634	Acanthochromis_polyacanthus
ENSPTIG00000015683	XRN2	97	99.243	ENSAMEG00000012581	XRN2	97	99.243	Ailuropoda_melanoleuca
ENSPTIG00000015683	XRN2	87	69.484	ENSACIG00000015047	xrn2	90	73.737	Amphilophus_citrinellus
ENSPTIG00000015683	XRN2	94	71.429	ENSAOCG00000023632	xrn2	97	70.177	Amphiprion_ocellaris
ENSPTIG00000015683	XRN2	94	71.257	ENSAPEG00000014871	xrn2	97	69.979	Amphiprion_percula
ENSPTIG00000015683	XRN2	93	70.903	ENSATEG00000001273	xrn2	95	70.217	Anabas_testudineus
ENSPTIG00000015683	XRN2	97	83.208	ENSAPLG00000013869	XRN2	99	83.638	Anas_platyrhynchos
ENSPTIG00000015683	XRN2	97	82.128	ENSACAG00000005565	XRN2	97	82.128	Anolis_carolinensis
ENSPTIG00000015683	XRN2	97	97.405	ENSANAG00000020126	XRN2	97	97.405	Aotus_nancymaae
ENSPTIG00000015683	XRN2	87	72.944	ENSACLG00000010522	xrn2	77	98.667	Astatotilapia_calliptera
ENSPTIG00000015683	XRN2	97	70.576	ENSAMXG00000018301	xrn2	97	70.576	Astyanax_mexicanus
ENSPTIG00000015683	XRN2	97	96.112	ENSBTAG00000011304	XRN2	100	95.987	Bos_taurus
ENSPTIG00000015683	XRN2	84	55.635	WBGene00006964	xrn-2	86	54.895	Caenorhabditis_elegans
ENSPTIG00000015683	XRN2	97	97.622	ENSCJAG00000005611	XRN2	97	97.622	Callithrix_jacchus
ENSPTIG00000015683	XRN2	97	99.135	ENSCAFG00000005185	XRN2	98	99.135	Canis_familiaris
ENSPTIG00000015683	XRN2	97	99.135	ENSCAFG00020027479	XRN2	97	99.135	Canis_lupus_dingo
ENSPTIG00000015683	XRN2	97	96.328	ENSCHIG00000006921	XRN2	97	96.328	Capra_hircus
ENSPTIG00000015683	XRN2	97	97.189	ENSTSYG00000008315	XRN2	97	97.189	Carlito_syrichta
ENSPTIG00000015683	XRN2	97	82.201	ENSCAPG00000010773	XRN2	99	82.093	Cavia_aperea
ENSPTIG00000015683	XRN2	97	97.405	ENSCPOG00000009407	XRN2	97	97.405	Cavia_porcellus
ENSPTIG00000015683	XRN2	97	98.054	ENSCATG00000040350	XRN2	97	98.054	Cercocebus_atys
ENSPTIG00000015683	XRN2	97	97.730	ENSCLAG00000013419	XRN2	97	97.730	Chinchilla_lanigera
ENSPTIG00000015683	XRN2	97	98.054	ENSCSAG00000011094	XRN2	97	98.054	Chlorocebus_sabaeus
ENSPTIG00000015683	XRN2	68	98.925	ENSCHOG00000013404	XRN2	70	98.925	Choloepus_hoffmanni
ENSPTIG00000015683	XRN2	97	84.278	ENSCPBG00000023533	XRN2	99	84.920	Chrysemys_picta_bellii
ENSPTIG00000015683	XRN2	83	59.975	ENSCING00000022336	-	97	60.345	Ciona_intestinalis
ENSPTIG00000015683	XRN2	84	58.867	ENSCSAVG00000011217	-	92	64.744	Ciona_savignyi
ENSPTIG00000015683	XRN2	97	98.054	ENSCANG00000040240	XRN2	97	98.054	Colobus_angolensis_palliatus
ENSPTIG00000015683	XRN2	95	96.018	ENSCGRG00001010676	Xrn2	97	96.018	Cricetulus_griseus_chok1gshd
ENSPTIG00000015683	XRN2	97	95.361	ENSCGRG00000006378	Xrn2	99	95.361	Cricetulus_griseus_crigri
ENSPTIG00000015683	XRN2	51	71.281	ENSCSEG00000005628	xrn2	95	71.281	Cynoglossus_semilaevis
ENSPTIG00000015683	XRN2	87	70.498	ENSCVAG00000018999	xrn2	93	76.152	Cyprinodon_variegatus
ENSPTIG00000015683	XRN2	97	69.198	ENSDARG00000101900	xrn2	92	77.666	Danio_rerio
ENSPTIG00000015683	XRN2	97	96.973	ENSDNOG00000001895	XRN2	97	96.973	Dasypus_novemcinctus
ENSPTIG00000015683	XRN2	97	94.919	ENSDORG00000005434	Xrn2	97	94.919	Dipodomys_ordii
ENSPTIG00000015683	XRN2	84	55.817	FBgn0031868	Rat1	86	55.542	Drosophila_melanogaster
ENSPTIG00000015683	XRN2	97	83.459	ENSETEG00000001740	XRN2	97	83.459	Echinops_telfairi
ENSPTIG00000015683	XRN2	82	72.229	ENSEBUG00000016136	xrn2	99	72.229	Eptatretus_burgeri
ENSPTIG00000015683	XRN2	97	98.054	ENSEASG00005002484	XRN2	97	98.054	Equus_asinus_asinus
ENSPTIG00000015683	XRN2	97	98.156	ENSECAG00000018988	XRN2	97	96.288	Equus_caballus
ENSPTIG00000015683	XRN2	78	85.033	ENSEEUG00000009265	XRN2	78	85.033	Erinaceus_europaeus
ENSPTIG00000015683	XRN2	97	70.105	ENSELUG00000000552	xrn2	97	70.526	Esox_lucius
ENSPTIG00000015683	XRN2	97	100.000	ENSFCAG00000007970	XRN2	97	100.000	Felis_catus
ENSPTIG00000015683	XRN2	97	82.435	ENSFALG00000004508	XRN2	97	82.866	Ficedula_albicollis
ENSPTIG00000015683	XRN2	97	97.297	ENSFDAG00000016311	XRN2	97	97.297	Fukomys_damarensis
ENSPTIG00000015683	XRN2	51	68.876	ENSFHEG00000013039	xrn2	75	88.158	Fundulus_heteroclitus
ENSPTIG00000015683	XRN2	83	72.522	ENSGMOG00000013436	xrn2	97	72.522	Gadus_morhua
ENSPTIG00000015683	XRN2	97	82.454	ENSGALG00000008372	XRN2	97	82.454	Gallus_gallus
ENSPTIG00000015683	XRN2	87	72.782	ENSGAFG00000014284	xrn2	95	72.782	Gambusia_affinis
ENSPTIG00000015683	XRN2	85	74.069	ENSGACG00000011870	xrn2	97	74.069	Gasterosteus_aculeatus
ENSPTIG00000015683	XRN2	97	84.385	ENSGAGG00000004884	XRN2	97	85.027	Gopherus_agassizii
ENSPTIG00000015683	XRN2	97	97.946	ENSGGOG00000013738	XRN2	97	97.946	Gorilla_gorilla
ENSPTIG00000015683	XRN2	51	73.737	ENSHBUG00000005077	xrn2	77	98.667	Haplochromis_burtoni
ENSPTIG00000015683	XRN2	97	96.324	ENSHGLG00000014831	XRN2	97	96.324	Heterocephalus_glaber_female
ENSPTIG00000015683	XRN2	97	96.324	ENSHGLG00100013130	XRN2	97	96.324	Heterocephalus_glaber_male
ENSPTIG00000015683	XRN2	97	67.256	ENSHCOG00000011994	xrn2	97	68.191	Hippocampus_comes
ENSPTIG00000015683	XRN2	97	68.763	ENSIPUG00000006639	xrn2	97	68.763	Ictalurus_punctatus
ENSPTIG00000015683	XRN2	97	98.054	ENSSTOG00000000589	XRN2	97	98.054	Ictidomys_tridecemlineatus
ENSPTIG00000015683	XRN2	97	96.432	ENSJJAG00000022128	Xrn2	97	96.432	Jaculus_jaculus
ENSPTIG00000015683	XRN2	51	79.218	ENSLBEG00000010041	xrn2	95	79.218	Labrus_bergylta
ENSPTIG00000015683	XRN2	94	77.197	ENSLACG00000008307	XRN2	97	81.000	Latimeria_chalumnae
ENSPTIG00000015683	XRN2	97	72.366	ENSLOCG00000016874	xrn2	93	76.604	Lepisosteus_oculatus
ENSPTIG00000015683	XRN2	97	97.081	ENSLAFG00000014624	XRN2	97	97.081	Loxodonta_africana
ENSPTIG00000015683	XRN2	97	98.054	ENSMFAG00000038122	XRN2	97	98.054	Macaca_fascicularis
ENSPTIG00000015683	XRN2	97	98.054	ENSMMUG00000011405	XRN2	97	98.054	Macaca_mulatta
ENSPTIG00000015683	XRN2	97	98.162	ENSMNEG00000040626	XRN2	97	98.162	Macaca_nemestrina
ENSPTIG00000015683	XRN2	97	97.946	ENSMLEG00000041897	XRN2	97	97.946	Mandrillus_leucophaeus
ENSPTIG00000015683	XRN2	93	72.116	ENSMAMG00000008633	xrn2	95	70.582	Mastacembelus_armatus
ENSPTIG00000015683	XRN2	87	74.970	ENSMZEG00005022362	xrn2	94	74.970	Maylandia_zebra
ENSPTIG00000015683	XRN2	97	81.136	ENSMGAG00000003196	XRN2	97	81.136	Meleagris_gallopavo
ENSPTIG00000015683	XRN2	97	96.216	ENSMAUG00000021842	Xrn2	97	96.216	Mesocricetus_auratus
ENSPTIG00000015683	XRN2	97	97.081	ENSMICG00000008126	XRN2	97	97.081	Microcebus_murinus
ENSPTIG00000015683	XRN2	97	95.784	ENSMOCG00000012588	Xrn2	97	95.784	Microtus_ochrogaster
ENSPTIG00000015683	XRN2	87	73.081	ENSMMOG00000017576	xrn2	93	73.081	Mola_mola
ENSPTIG00000015683	XRN2	97	90.703	ENSMODG00000006163	XRN2	97	90.703	Monodelphis_domestica
ENSPTIG00000015683	XRN2	88	71.759	ENSMALG00000011355	xrn2	97	71.759	Monopterus_albus
ENSPTIG00000015683	XRN2	97	95.140	MGP_CAROLIEiJ_G0024400	Xrn2	97	95.140	Mus_caroli
ENSPTIG00000015683	XRN2	97	95.356	ENSMUSG00000027433	Xrn2	97	95.356	Mus_musculus
ENSPTIG00000015683	XRN2	97	95.243	MGP_PahariEiJ_G0025843	Xrn2	97	95.243	Mus_pahari
ENSPTIG00000015683	XRN2	97	95.356	MGP_SPRETEiJ_G0025318	Xrn2	97	95.356	Mus_spretus
ENSPTIG00000015683	XRN2	97	97.452	ENSMPUG00000001198	XRN2	91	97.452	Mustela_putorius_furo
ENSPTIG00000015683	XRN2	97	97.297	ENSMLUG00000001536	XRN2	97	97.297	Myotis_lucifugus
ENSPTIG00000015683	XRN2	97	96.541	ENSNGAG00000018138	Xrn2	97	96.541	Nannospalax_galili
ENSPTIG00000015683	XRN2	87	75.179	ENSNBRG00000008062	xrn2	77	98.667	Neolamprologus_brichardi
ENSPTIG00000015683	XRN2	97	97.946	ENSNLEG00000009991	XRN2	97	97.946	Nomascus_leucogenys
ENSPTIG00000015683	XRN2	66	97.778	ENSMEUG00000008622	-	67	97.778	Notamacropus_eugenii
ENSPTIG00000015683	XRN2	75	79.058	ENSOPRG00000001397	-	77	79.058	Ochotona_princeps
ENSPTIG00000015683	XRN2	97	97.189	ENSODEG00000010745	-	97	97.189	Octodon_degus
ENSPTIG00000015683	XRN2	96	87.978	ENSODEG00000000860	-	98	88.415	Octodon_degus
ENSPTIG00000015683	XRN2	97	70.975	ENSONIG00000018720	xrn2	97	71.186	Oreochromis_niloticus
ENSPTIG00000015683	XRN2	97	90.939	ENSOANG00000015673	XRN2	97	90.939	Ornithorhynchus_anatinus
ENSPTIG00000015683	XRN2	97	98.054	ENSOCUG00000013468	XRN2	97	98.054	Oryctolagus_cuniculus
ENSPTIG00000015683	XRN2	96	69.584	ENSORLG00000017213	xrn2	94	74.286	Oryzias_latipes
ENSPTIG00000015683	XRN2	96	69.584	ENSORLG00020001824	xrn2	97	69.444	Oryzias_latipes_hni
ENSPTIG00000015683	XRN2	96	69.370	ENSORLG00015019747	xrn2	97	69.338	Oryzias_latipes_hsok
ENSPTIG00000015683	XRN2	87	73.421	ENSOMEG00000019820	xrn2	97	68.295	Oryzias_melastigma
ENSPTIG00000015683	XRN2	97	96.973	ENSOGAG00000001068	XRN2	97	96.973	Otolemur_garnettii
ENSPTIG00000015683	XRN2	97	96.328	ENSOARG00000004443	XRN2	100	96.328	Ovis_aries
ENSPTIG00000015683	XRN2	97	97.946	ENSPPAG00000033549	XRN2	97	97.946	Pan_paniscus
ENSPTIG00000015683	XRN2	97	100.000	ENSPPRG00000008732	XRN2	97	100.000	Panthera_pardus
ENSPTIG00000015683	XRN2	97	97.946	ENSPTRG00000013308	XRN2	97	97.946	Pan_troglodytes
ENSPTIG00000015683	XRN2	97	98.054	ENSPANG00000018088	XRN2	97	98.054	Papio_anubis
ENSPTIG00000015683	XRN2	97	70.347	ENSPKIG00000016889	xrn2	97	70.347	Paramormyrops_kingsleyae
ENSPTIG00000015683	XRN2	81	87.109	ENSPSIG00000014666	XRN2	100	87.109	Pelodiscus_sinensis
ENSPTIG00000015683	XRN2	97	95.568	ENSPEMG00000000111	Xrn2	97	95.568	Peromyscus_maniculatus_bairdii
ENSPTIG00000015683	XRN2	97	69.157	ENSPFOG00000004182	xrn2	97	69.574	Poecilia_formosa
ENSPTIG00000015683	XRN2	87	73.501	ENSPLAG00000007351	xrn2	93	73.501	Poecilia_latipinna
ENSPTIG00000015683	XRN2	94	68.118	ENSPMEG00000011798	xrn2	99	68.988	Poecilia_mexicana
ENSPTIG00000015683	XRN2	87	73.381	ENSPREG00000012452	xrn2	96	71.792	Poecilia_reticulata
ENSPTIG00000015683	XRN2	97	97.514	ENSPPYG00000010755	XRN2	97	97.514	Pongo_abelii
ENSPTIG00000015683	XRN2	97	90.831	ENSPCAG00000011191	XRN2	97	90.831	Procavia_capensis
ENSPTIG00000015683	XRN2	97	90.162	ENSPCOG00000016468	XRN2	97	90.162	Propithecus_coquereli
ENSPTIG00000015683	XRN2	90	95.441	ENSPVAG00000004596	XRN2	90	95.441	Pteropus_vampyrus
ENSPTIG00000015683	XRN2	87	72.944	ENSPNYG00000001765	xrn2	94	72.944	Pundamilia_nyererei
ENSPTIG00000015683	XRN2	97	70.440	ENSPNAG00000010956	xrn2	97	70.440	Pygocentrus_nattereri
ENSPTIG00000015683	XRN2	97	96.112	ENSRNOG00000011785	Xrn2	97	96.112	Rattus_norvegicus
ENSPTIG00000015683	XRN2	84	98.108	ENSRBIG00000036193	XRN2	97	98.108	Rhinopithecus_bieti
ENSPTIG00000015683	XRN2	97	98.054	ENSRROG00000044400	XRN2	88	98.054	Rhinopithecus_roxellana
ENSPTIG00000015683	XRN2	67	51.090	YOR048C	RAT1	60	52.685	Saccharomyces_cerevisiae
ENSPTIG00000015683	XRN2	97	97.730	ENSSBOG00000021014	XRN2	97	97.730	Saimiri_boliviensis_boliviensis
ENSPTIG00000015683	XRN2	97	71.474	ENSSFOG00015001091	xrn2	97	71.474	Scleropages_formosus
ENSPTIG00000015683	XRN2	90	72.674	ENSSMAG00000007834	xrn2	97	68.262	Scophthalmus_maximus
ENSPTIG00000015683	XRN2	88	71.329	ENSSDUG00000012802	xrn2	96	71.678	Seriola_dumerili
ENSPTIG00000015683	XRN2	90	73.108	ENSSLDG00000021273	xrn2	97	73.108	Seriola_lalandi_dorsalis
ENSPTIG00000015683	XRN2	74	94.595	ENSSARG00000005859	-	74	94.595	Sorex_araneus
ENSPTIG00000015683	XRN2	95	79.405	ENSSPUG00000005485	XRN2	93	79.473	Sphenodon_punctatus
ENSPTIG00000015683	XRN2	97	69.926	ENSSPAG00000016027	xrn2	97	69.926	Stegastes_partitus
ENSPTIG00000015683	XRN2	97	96.108	ENSSSCG00000007109	XRN2	97	96.108	Sus_scrofa
ENSPTIG00000015683	XRN2	97	81.116	ENSTGUG00000007535	XRN2	97	81.545	Taeniopygia_guttata
ENSPTIG00000015683	XRN2	97	66.909	ENSTRUG00000015489	xrn2	97	67.290	Takifugu_rubripes
ENSPTIG00000015683	XRN2	97	70.331	ENSTNIG00000010712	xrn2	97	70.331	Tetraodon_nigroviridis
ENSPTIG00000015683	XRN2	97	97.081	ENSTBEG00000004119	XRN2	97	97.081	Tupaia_belangeri
ENSPTIG00000015683	XRN2	91	98.113	ENSTTRG00000009087	XRN2	90	98.113	Tursiops_truncatus
ENSPTIG00000015683	XRN2	97	99.351	ENSUAMG00000024634	XRN2	97	99.351	Ursus_americanus
ENSPTIG00000015683	XRN2	97	99.135	ENSUMAG00000004012	XRN2	95	99.135	Ursus_maritimus
ENSPTIG00000015683	XRN2	89	90.178	ENSVPAG00000010694	XRN2	91	90.178	Vicugna_pacos
ENSPTIG00000015683	XRN2	97	99.243	ENSVVUG00000012178	XRN2	97	99.243	Vulpes_vulpes
ENSPTIG00000015683	XRN2	97	73.876	ENSXETG00000023501	xrn2	97	74.518	Xenopus_tropicalis
ENSPTIG00000015683	XRN2	97	67.476	ENSXMAG00000000242	xrn2	97	68.321	Xiphophorus_maculatus