EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000015866 (Gene tree)
Gene ID: 102960670
Gene Symbol: CLP1
Alias: -
Full Name: cleavage and polyadenylation factor I subunit 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 3234 bases
Position: chrKE722001.1:659015-662248
Accession: 102960670
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017416	Clp1	PF06807.14	1.4e-30	1	1
ENSPTIP00000017422	Clp1	PF06807.14	1.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000021643	CLP1-202	2500	XM_007092622	ENSPTIP00000017422	425 (aa)	XP_007092684	UPI0002383441
ENSPTIT00000021637	CLP1-201	2828	XM_007092623	ENSPTIP00000017416	425 (aa)	XP_007092685	UPI0002383441

Gene Model

Click here to download ENSPTIG00000015866's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000015866's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000015866	CLP1	100	99.294	ENSG00000172409	CLP1	100	99.294	Homo_sapiens
ENSPTIG00000015866	CLP1	98	76.651	ENSAPOG00000008242	clp1	96	76.651	Acanthochromis_polyacanthus
ENSPTIG00000015866	CLP1	100	99.765	ENSAMEG00000014551	CLP1	98	99.765	Ailuropoda_melanoleuca
ENSPTIG00000015866	CLP1	99	74.713	ENSACIG00000006310	clp1	98	74.713	Amphilophus_citrinellus
ENSPTIG00000015866	CLP1	99	75.402	ENSAOCG00000010681	clp1	98	76.960	Amphiprion_ocellaris
ENSPTIG00000015866	CLP1	98	76.651	ENSAPEG00000012165	clp1	99	76.651	Amphiprion_percula
ENSPTIG00000015866	CLP1	99	76.102	ENSATEG00000012374	clp1	98	76.102	Anabas_testudineus
ENSPTIG00000015866	CLP1	100	93.882	ENSACAG00000007139	CLP1	100	93.882	Anolis_carolinensis
ENSPTIG00000015866	CLP1	100	99.294	ENSANAG00000034935	CLP1	100	99.294	Aotus_nancymaae
ENSPTIG00000015866	CLP1	99	75.174	ENSACLG00000013573	clp1	98	75.174	Astatotilapia_calliptera
ENSPTIG00000015866	CLP1	97	78.860	ENSAMXG00000014194	clp1	98	78.860	Astyanax_mexicanus
ENSPTIG00000015866	CLP1	100	99.765	ENSBTAG00000006493	CLP1	100	99.765	Bos_taurus
ENSPTIG00000015866	CLP1	96	47.962	WBGene00010304	clpf-1	97	47.962	Caenorhabditis_elegans
ENSPTIG00000015866	CLP1	100	99.294	ENSCJAG00000008748	CLP1	100	99.294	Callithrix_jacchus
ENSPTIG00000015866	CLP1	100	99.765	ENSCAFG00000007815	CLP1	100	99.765	Canis_familiaris
ENSPTIG00000015866	CLP1	100	99.765	ENSCAFG00020000903	CLP1	100	99.765	Canis_lupus_dingo
ENSPTIG00000015866	CLP1	100	99.529	ENSCHIG00000023497	CLP1	100	99.529	Capra_hircus
ENSPTIG00000015866	CLP1	100	99.529	ENSTSYG00000006824	CLP1	99	99.529	Carlito_syrichta
ENSPTIG00000015866	CLP1	100	99.059	ENSCAPG00000009703	CLP1	100	99.059	Cavia_aperea
ENSPTIG00000015866	CLP1	98	99.519	ENSCPOG00000012554	CLP1	99	99.519	Cavia_porcellus
ENSPTIG00000015866	CLP1	100	98.824	ENSCCAG00000031957	CLP1	100	98.824	Cebus_capucinus
ENSPTIG00000015866	CLP1	100	99.294	ENSCATG00000044628	CLP1	100	99.294	Cercocebus_atys
ENSPTIG00000015866	CLP1	100	99.529	ENSCLAG00000004094	CLP1	100	99.529	Chinchilla_lanigera
ENSPTIG00000015866	CLP1	100	99.294	ENSCSAG00000005994	CLP1	100	99.294	Chlorocebus_sabaeus
ENSPTIG00000015866	CLP1	100	94.353	ENSCPBG00000016843	CLP1	100	94.353	Chrysemys_picta_bellii
ENSPTIG00000015866	CLP1	99	63.121	ENSCING00000003779	-	98	63.121	Ciona_intestinalis
ENSPTIG00000015866	CLP1	99	63.033	ENSCSAVG00000003437	-	99	63.033	Ciona_savignyi
ENSPTIG00000015866	CLP1	100	99.294	ENSCANG00000034335	CLP1	100	99.294	Colobus_angolensis_palliatus
ENSPTIG00000015866	CLP1	100	99.059	ENSCGRG00001002227	CLP1	100	99.059	Cricetulus_griseus_chok1gshd
ENSPTIG00000015866	CLP1	100	99.059	ENSCGRG00000004328	CLP1	100	99.059	Cricetulus_griseus_crigri
ENSPTIG00000015866	CLP1	99	74.478	ENSCSEG00000008614	clp1	98	74.478	Cynoglossus_semilaevis
ENSPTIG00000015866	CLP1	99	75.638	ENSCVAG00000020101	clp1	98	75.638	Cyprinodon_variegatus
ENSPTIG00000015866	CLP1	97	79.714	ENSDARG00000063663	clp1	95	79.714	Danio_rerio
ENSPTIG00000015866	CLP1	99	99.292	ENSDNOG00000042415	CLP1	90	99.292	Dasypus_novemcinctus
ENSPTIG00000015866	CLP1	100	99.294	ENSDORG00000014685	Clp1	100	99.294	Dipodomys_ordii
ENSPTIG00000015866	CLP1	96	56.796	FBgn0033842	cbc	97	56.796	Drosophila_melanogaster
ENSPTIG00000015866	CLP1	100	99.529	ENSETEG00000003009	CLP1	100	99.529	Echinops_telfairi
ENSPTIG00000015866	CLP1	97	72.397	ENSEBUG00000011648	clp1	97	72.397	Eptatretus_burgeri
ENSPTIG00000015866	CLP1	100	99.529	ENSEASG00005002093	CLP1	100	99.529	Equus_asinus_asinus
ENSPTIG00000015866	CLP1	100	99.529	ENSECAG00000011597	CLP1	100	99.529	Equus_caballus
ENSPTIG00000015866	CLP1	100	98.353	ENSEEUG00000012771	CLP1	100	98.353	Erinaceus_europaeus
ENSPTIG00000015866	CLP1	97	79.335	ENSELUG00000024048	clp1	95	79.335	Esox_lucius
ENSPTIG00000015866	CLP1	100	100.000	ENSFCAG00000006633	CLP1	100	100.000	Felis_catus
ENSPTIG00000015866	CLP1	100	92.235	ENSFALG00000011145	CLP1	100	92.235	Ficedula_albicollis
ENSPTIG00000015866	CLP1	100	99.529	ENSFDAG00000000234	CLP1	100	99.529	Fukomys_damarensis
ENSPTIG00000015866	CLP1	99	75.174	ENSFHEG00000014760	CLP1	98	75.174	Fundulus_heteroclitus
ENSPTIG00000015866	CLP1	99	78.089	ENSGMOG00000019340	clp1	98	78.089	Gadus_morhua
ENSPTIG00000015866	CLP1	100	92.941	ENSGALG00000007370	CLP1	100	92.941	Gallus_gallus
ENSPTIG00000015866	CLP1	99	75.638	ENSGAFG00000003020	clp1	99	75.638	Gambusia_affinis
ENSPTIG00000015866	CLP1	99	76.566	ENSGACG00000017832	clp1	98	76.566	Gasterosteus_aculeatus
ENSPTIG00000015866	CLP1	100	94.118	ENSGAGG00000013279	CLP1	100	94.118	Gopherus_agassizii
ENSPTIG00000015866	CLP1	100	99.294	ENSGGOG00000023006	CLP1	100	99.294	Gorilla_gorilla
ENSPTIG00000015866	CLP1	99	75.174	ENSHBUG00000010436	clp1	98	75.174	Haplochromis_burtoni
ENSPTIG00000015866	CLP1	100	99.529	ENSHGLG00000009914	CLP1	100	99.529	Heterocephalus_glaber_female
ENSPTIG00000015866	CLP1	100	99.529	ENSHGLG00100006105	CLP1	100	99.529	Heterocephalus_glaber_male
ENSPTIG00000015866	CLP1	99	76.782	ENSHCOG00000010072	clp1	99	76.782	Hippocampus_comes
ENSPTIG00000015866	CLP1	97	79.524	ENSIPUG00000016238	clp1	94	79.335	Ictalurus_punctatus
ENSPTIG00000015866	CLP1	100	99.529	ENSSTOG00000029257	CLP1	100	99.529	Ictidomys_tridecemlineatus
ENSPTIG00000015866	CLP1	100	99.059	ENSJJAG00000023691	Clp1	100	99.059	Jaculus_jaculus
ENSPTIG00000015866	CLP1	99	74.942	ENSKMAG00000011990	clp1	98	74.942	Kryptolebias_marmoratus
ENSPTIG00000015866	CLP1	99	76.334	ENSLBEG00000010201	clp1	98	76.334	Labrus_bergylta
ENSPTIG00000015866	CLP1	100	85.412	ENSLACG00000003160	CLP1	100	85.412	Latimeria_chalumnae
ENSPTIG00000015866	CLP1	73	76.708	ENSLOCG00000008074	clp1	100	77.640	Lepisosteus_oculatus
ENSPTIG00000015866	CLP1	100	99.294	ENSLAFG00000014907	CLP1	100	99.294	Loxodonta_africana
ENSPTIG00000015866	CLP1	100	99.294	ENSMFAG00000046074	CLP1	100	99.294	Macaca_fascicularis
ENSPTIG00000015866	CLP1	100	99.294	ENSMMUG00000038007	CLP1	99	99.294	Macaca_mulatta
ENSPTIG00000015866	CLP1	100	99.294	ENSMNEG00000000259	CLP1	100	99.294	Macaca_nemestrina
ENSPTIG00000015866	CLP1	100	99.294	ENSMLEG00000043556	CLP1	100	99.294	Mandrillus_leucophaeus
ENSPTIG00000015866	CLP1	100	75.520	ENSMAMG00000002149	clp1	98	75.520	Mastacembelus_armatus
ENSPTIG00000015866	CLP1	99	75.174	ENSMZEG00005002850	clp1	98	75.174	Maylandia_zebra
ENSPTIG00000015866	CLP1	100	92.941	ENSMGAG00000009643	CLP1	100	92.941	Meleagris_gallopavo
ENSPTIG00000015866	CLP1	100	98.353	ENSMAUG00000016261	Clp1	100	98.353	Mesocricetus_auratus
ENSPTIG00000015866	CLP1	100	99.765	ENSMICG00000004895	CLP1	100	99.765	Microcebus_murinus
ENSPTIG00000015866	CLP1	100	99.294	ENSMOCG00000005498	Clp1	100	99.294	Microtus_ochrogaster
ENSPTIG00000015866	CLP1	98	78.066	ENSMMOG00000003229	clp1	96	78.066	Mola_mola
ENSPTIG00000015866	CLP1	100	97.647	ENSMODG00000024148	-	100	97.647	Monodelphis_domestica
ENSPTIG00000015866	CLP1	100	97.647	ENSMODG00000020107	-	100	97.647	Monodelphis_domestica
ENSPTIG00000015866	CLP1	99	75.172	ENSMALG00000014239	clp1	99	75.172	Monopterus_albus
ENSPTIG00000015866	CLP1	100	98.824	MGP_CAROLIEiJ_G0023726	Clp1	100	98.824	Mus_caroli
ENSPTIG00000015866	CLP1	100	98.824	ENSMUSG00000027079	Clp1	100	98.824	Mus_musculus
ENSPTIG00000015866	CLP1	100	98.588	MGP_PahariEiJ_G0025177	Clp1	100	98.588	Mus_pahari
ENSPTIG00000015866	CLP1	100	98.824	MGP_SPRETEiJ_G0024646	Clp1	100	98.824	Mus_spretus
ENSPTIG00000015866	CLP1	100	99.765	ENSMPUG00000000268	CLP1	100	99.765	Mustela_putorius_furo
ENSPTIG00000015866	CLP1	100	98.824	ENSMLUG00000007904	CLP1	100	98.824	Myotis_lucifugus
ENSPTIG00000015866	CLP1	100	99.529	ENSNGAG00000006165	Clp1	100	99.529	Nannospalax_galili
ENSPTIG00000015866	CLP1	99	75.174	ENSNBRG00000005225	clp1	98	75.174	Neolamprologus_brichardi
ENSPTIG00000015866	CLP1	82	94.949	ENSNLEG00000012809	-	100	94.949	Nomascus_leucogenys
ENSPTIG00000015866	CLP1	100	97.647	ENSMEUG00000010949	CLP1	99	97.647	Notamacropus_eugenii
ENSPTIG00000015866	CLP1	70	99.329	ENSOPRG00000007329	CLP1	100	99.329	Ochotona_princeps
ENSPTIG00000015866	CLP1	100	99.529	ENSODEG00000011410	CLP1	100	99.529	Octodon_degus
ENSPTIG00000015866	CLP1	99	74.942	ENSONIG00000005089	clp1	98	74.942	Oreochromis_niloticus
ENSPTIG00000015866	CLP1	100	99.294	ENSOCUG00000007045	CLP1	100	99.294	Oryctolagus_cuniculus
ENSPTIG00000015866	CLP1	99	74.483	ENSORLG00000003647	clp1	99	74.483	Oryzias_latipes
ENSPTIG00000015866	CLP1	99	74.253	ENSORLG00020016676	clp1	99	74.253	Oryzias_latipes_hni
ENSPTIG00000015866	CLP1	99	74.483	ENSORLG00015019484	clp1	99	74.483	Oryzias_latipes_hsok
ENSPTIG00000015866	CLP1	99	74.942	ENSOMEG00000021303	clp1	98	74.942	Oryzias_melastigma
ENSPTIG00000015866	CLP1	100	100.000	ENSOGAG00000004508	CLP1	100	100.000	Otolemur_garnettii
ENSPTIG00000015866	CLP1	100	98.118	ENSOARG00000010145	CLP1	98	98.118	Ovis_aries
ENSPTIG00000015866	CLP1	100	99.294	ENSPPAG00000041519	CLP1	100	99.294	Pan_paniscus
ENSPTIG00000015866	CLP1	100	100.000	ENSPPRG00000006135	CLP1	100	100.000	Panthera_pardus
ENSPTIG00000015866	CLP1	100	99.294	ENSPTRG00000047318	CLP1	100	99.294	Pan_troglodytes
ENSPTIG00000015866	CLP1	100	99.294	ENSPANG00000017078	CLP1	97	99.294	Papio_anubis
ENSPTIG00000015866	CLP1	97	80.387	ENSPKIG00000007697	clp1	94	80.387	Paramormyrops_kingsleyae
ENSPTIG00000015866	CLP1	95	91.791	ENSPSIG00000005468	CLP1	100	91.791	Pelodiscus_sinensis
ENSPTIG00000015866	CLP1	99	76.744	ENSPMGG00000012171	clp1	98	76.744	Periophthalmus_magnuspinnatus
ENSPTIG00000015866	CLP1	100	99.294	ENSPEMG00000011213	-	100	99.294	Peromyscus_maniculatus_bairdii
ENSPTIG00000015866	CLP1	100	76.056	ENSPMAG00000006707	clp1	100	76.056	Petromyzon_marinus
ENSPTIG00000015866	CLP1	100	97.647	ENSPCIG00000011899	CLP1	99	97.647	Phascolarctos_cinereus
ENSPTIG00000015866	CLP1	99	75.174	ENSPFOG00000008169	clp1	98	75.174	Poecilia_formosa
ENSPTIG00000015866	CLP1	99	75.174	ENSPLAG00000022388	clp1	99	75.174	Poecilia_latipinna
ENSPTIG00000015866	CLP1	99	75.174	ENSPMEG00000021088	clp1	99	75.174	Poecilia_mexicana
ENSPTIG00000015866	CLP1	99	75.406	ENSPREG00000017802	clp1	98	75.406	Poecilia_reticulata
ENSPTIG00000015866	CLP1	53	99.554	ENSPPYG00000003266	-	100	99.554	Pongo_abelii
ENSPTIG00000015866	CLP1	100	99.765	ENSPCOG00000000360	CLP1	98	99.765	Propithecus_coquereli
ENSPTIG00000015866	CLP1	100	99.765	ENSPVAG00000016270	CLP1	100	99.765	Pteropus_vampyrus
ENSPTIG00000015866	CLP1	99	75.174	ENSPNYG00000017274	clp1	97	75.174	Pundamilia_nyererei
ENSPTIG00000015866	CLP1	97	80.238	ENSPNAG00000026460	clp1	95	80.285	Pygocentrus_nattereri
ENSPTIG00000015866	CLP1	100	98.824	ENSRNOG00000007416	Clp1	100	98.824	Rattus_norvegicus
ENSPTIG00000015866	CLP1	100	99.294	ENSRBIG00000018191	CLP1	100	99.294	Rhinopithecus_bieti
ENSPTIG00000015866	CLP1	100	99.294	ENSRROG00000039265	CLP1	100	99.294	Rhinopithecus_roxellana
ENSPTIG00000015866	CLP1	96	79.310	ENSSBOG00000010558	-	93	79.310	Saimiri_boliviensis_boliviensis
ENSPTIG00000015866	CLP1	100	99.294	ENSSBOG00000032517	-	100	99.294	Saimiri_boliviensis_boliviensis
ENSPTIG00000015866	CLP1	100	97.882	ENSSHAG00000015695	CLP1	100	97.882	Sarcophilus_harrisii
ENSPTIG00000015866	CLP1	97	79.059	ENSSFOG00015000628	clp1	96	79.059	Scleropages_formosus
ENSPTIG00000015866	CLP1	99	75.174	ENSSMAG00000019423	clp1	97	75.174	Scophthalmus_maximus
ENSPTIG00000015866	CLP1	99	76.092	ENSSDUG00000014495	clp1	99	76.092	Seriola_dumerili
ENSPTIG00000015866	CLP1	99	75.862	ENSSLDG00000000937	clp1	99	75.862	Seriola_lalandi_dorsalis
ENSPTIG00000015866	CLP1	52	99.103	ENSSARG00000002459	CLP1	100	99.103	Sorex_araneus
ENSPTIG00000015866	CLP1	100	93.176	ENSSPUG00000016811	CLP1	100	93.176	Sphenodon_punctatus
ENSPTIG00000015866	CLP1	99	74.943	ENSSPAG00000016052	clp1	99	74.943	Stegastes_partitus
ENSPTIG00000015866	CLP1	100	99.765	ENSSSCG00000031442	CLP1	100	99.765	Sus_scrofa
ENSPTIG00000015866	CLP1	100	92.000	ENSTGUG00000007002	CLP1	100	92.000	Taeniopygia_guttata
ENSPTIG00000015866	CLP1	99	76.581	ENSTRUG00000012602	clp1	98	76.581	Takifugu_rubripes
ENSPTIG00000015866	CLP1	99	76.112	ENSTNIG00000013125	clp1	98	76.112	Tetraodon_nigroviridis
ENSPTIG00000015866	CLP1	100	98.588	ENSTBEG00000009975	CLP1	100	98.588	Tupaia_belangeri
ENSPTIG00000015866	CLP1	100	99.294	ENSTTRG00000002096	CLP1	100	99.294	Tursiops_truncatus
ENSPTIG00000015866	CLP1	100	99.765	ENSUAMG00000011388	CLP1	100	99.765	Ursus_americanus
ENSPTIG00000015866	CLP1	100	99.765	ENSUMAG00000018317	CLP1	100	99.765	Ursus_maritimus
ENSPTIG00000015866	CLP1	100	99.765	ENSVVUG00000017138	CLP1	97	99.765	Vulpes_vulpes
ENSPTIG00000015866	CLP1	99	76.402	ENSXETG00000007088	clp1	95	78.417	Xenopus_tropicalis
ENSPTIG00000015866	CLP1	99	75.406	ENSXCOG00000002287	clp1	98	75.406	Xiphophorus_couchianus
ENSPTIG00000015866	CLP1	99	75.406	ENSXMAG00000009783	clp1	98	75.406	Xiphophorus_maculatus