EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016125 (Gene tree)
Gene ID: 102972590
Gene Symbol: URB1
Alias: -
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 70739 bases
Position: chrKE721924.1:231458-302196
Accession: 102972590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017825	Npa1	PF11707.8	5.7e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022060	URB1-201	6354	XM_015541190	ENSPTIP00000017825	2117 (aa)	XP_015396676	-

Gene Model

Click here to download ENSPTIG00000016125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016125	URB1	98	80.237	ENSG00000142207	URB1	92	80.237	Homo_sapiens
ENSPTIG00000016125	URB1	93	44.411	ENSAPOG00000020308	urb1	87	44.361	Acanthochromis_polyacanthus
ENSPTIG00000016125	URB1	97	85.104	ENSAMEG00000011998	URB1	92	85.052	Ailuropoda_melanoleuca
ENSPTIG00000016125	URB1	93	45.928	ENSACIG00000003248	urb1	88	45.928	Amphilophus_citrinellus
ENSPTIG00000016125	URB1	92	43.262	ENSAOCG00000010364	urb1	86	43.313	Amphiprion_ocellaris
ENSPTIG00000016125	URB1	89	51.913	ENSAPEG00000010758	urb1	87	51.913	Amphiprion_percula
ENSPTIG00000016125	URB1	95	45.360	ENSATEG00000011790	urb1	87	45.360	Anabas_testudineus
ENSPTIG00000016125	URB1	96	57.114	ENSAPLG00000012791	URB1	92	57.314	Anas_platyrhynchos
ENSPTIG00000016125	URB1	96	54.129	ENSACAG00000002817	URB1	91	54.128	Anolis_carolinensis
ENSPTIG00000016125	URB1	99	79.694	ENSANAG00000024617	URB1	93	79.694	Aotus_nancymaae
ENSPTIG00000016125	URB1	93	45.752	ENSACLG00000024865	urb1	87	45.752	Astatotilapia_calliptera
ENSPTIG00000016125	URB1	94	40.697	ENSAMXG00000012306	urb1	88	40.768	Astyanax_mexicanus
ENSPTIG00000016125	URB1	98	79.126	ENSBTAG00000012412	URB1	92	78.978	Bos_taurus
ENSPTIG00000016125	URB1	99	79.487	ENSCJAG00000009118	URB1	93	79.487	Callithrix_jacchus
ENSPTIG00000016125	URB1	98	85.251	ENSCAFG00000008892	URB1	92	85.251	Canis_familiaris
ENSPTIG00000016125	URB1	98	85.002	ENSCAFG00020025987	-	92	85.002	Canis_lupus_dingo
ENSPTIG00000016125	URB1	98	83.868	ENSCAFG00020025994	-	92	83.818	Canis_lupus_dingo
ENSPTIG00000016125	URB1	98	78.585	ENSCHIG00000015645	URB1	92	78.585	Capra_hircus
ENSPTIG00000016125	URB1	98	79.181	ENSTSYG00000013286	URB1	92	79.280	Carlito_syrichta
ENSPTIG00000016125	URB1	97	75.339	ENSCAPG00000015589	URB1	91	75.339	Cavia_aperea
ENSPTIG00000016125	URB1	98	75.850	ENSCPOG00000006748	URB1	92	75.850	Cavia_porcellus
ENSPTIG00000016125	URB1	99	79.734	ENSCCAG00000021299	URB1	93	79.832	Cebus_capucinus
ENSPTIG00000016125	URB1	98	80.286	ENSCATG00000042630	URB1	92	80.286	Cercocebus_atys
ENSPTIG00000016125	URB1	97	77.442	ENSCLAG00000005262	URB1	92	77.515	Chinchilla_lanigera
ENSPTIG00000016125	URB1	98	78.077	ENSCSAG00000009584	URB1	92	78.077	Chlorocebus_sabaeus
ENSPTIG00000016125	URB1	97	59.392	ENSCPBG00000006454	URB1	91	59.254	Chrysemys_picta_bellii
ENSPTIG00000016125	URB1	98	79.990	ENSCANG00000031088	URB1	92	79.990	Colobus_angolensis_palliatus
ENSPTIG00000016125	URB1	96	74.336	ENSCGRG00001010616	Urb1	92	73.448	Cricetulus_griseus_chok1gshd
ENSPTIG00000016125	URB1	96	74.009	ENSCGRG00000015840	Urb1	92	74.009	Cricetulus_griseus_crigri
ENSPTIG00000016125	URB1	92	50.000	ENSCSEG00000012616	urb1	88	50.000	Cynoglossus_semilaevis
ENSPTIG00000016125	URB1	82	52.155	ENSCVAG00000009076	urb1	96	52.505	Cyprinodon_variegatus
ENSPTIG00000016125	URB1	94	44.323	ENSDARG00000060308	urb1	88	44.373	Danio_rerio
ENSPTIG00000016125	URB1	90	77.477	ENSDNOG00000015586	URB1	99	77.477	Dasypus_novemcinctus
ENSPTIG00000016125	URB1	99	76.244	ENSDORG00000006735	Urb1	93	76.244	Dipodomys_ordii
ENSPTIG00000016125	URB1	91	80.157	ENSETEG00000009080	URB1	86	80.157	Echinops_telfairi
ENSPTIG00000016125	URB1	98	81.598	ENSEASG00005007711	URB1	92	81.598	Equus_asinus_asinus
ENSPTIG00000016125	URB1	98	83.128	ENSECAG00000013206	URB1	92	83.128	Equus_caballus
ENSPTIG00000016125	URB1	93	46.003	ENSELUG00000020516	urb1	86	46.104	Esox_lucius
ENSPTIG00000016125	URB1	98	93.929	ENSFCAG00000002177	URB1	92	93.929	Felis_catus
ENSPTIG00000016125	URB1	96	52.174	ENSFALG00000004636	URB1	92	52.122	Ficedula_albicollis
ENSPTIG00000016125	URB1	97	77.041	ENSFDAG00000007288	URB1	88	76.621	Fukomys_damarensis
ENSPTIG00000016125	URB1	89	43.916	ENSFHEG00000000202	urb1	88	43.208	Fundulus_heteroclitus
ENSPTIG00000016125	URB1	86	46.751	ENSGMOG00000001838	urb1	82	46.223	Gadus_morhua
ENSPTIG00000016125	URB1	97	56.496	ENSGALG00000015887	URB1	92	56.398	Gallus_gallus
ENSPTIG00000016125	URB1	93	43.851	ENSGAFG00000020694	urb1	88	51.160	Gambusia_affinis
ENSPTIG00000016125	URB1	93	45.938	ENSGACG00000011703	urb1	88	45.787	Gasterosteus_aculeatus
ENSPTIG00000016125	URB1	97	59.033	ENSGAGG00000022544	URB1	91	58.934	Gopherus_agassizii
ENSPTIG00000016125	URB1	98	80.187	ENSGGOG00000000285	URB1	92	80.187	Gorilla_gorilla
ENSPTIG00000016125	URB1	93	45.802	ENSHBUG00000001904	urb1	87	45.802	Haplochromis_burtoni
ENSPTIG00000016125	URB1	97	75.146	ENSHGLG00000004907	URB1	92	75.157	Heterocephalus_glaber_female
ENSPTIG00000016125	URB1	97	75.767	ENSHGLG00100010749	URB1	92	75.774	Heterocephalus_glaber_male
ENSPTIG00000016125	URB1	75	46.289	ENSHCOG00000018683	urb1	94	47.070	Hippocampus_comes
ENSPTIG00000016125	URB1	92	41.393	ENSIPUG00000014721	urb1	87	41.494	Ictalurus_punctatus
ENSPTIG00000016125	URB1	96	80.080	ENSSTOG00000004539	URB1	92	78.976	Ictidomys_tridecemlineatus
ENSPTIG00000016125	URB1	93	44.288	ENSKMAG00000006001	urb1	98	44.288	Kryptolebias_marmoratus
ENSPTIG00000016125	URB1	94	41.974	ENSLBEG00000027208	urb1	89	51.322	Labrus_bergylta
ENSPTIG00000016125	URB1	97	48.269	ENSLACG00000017059	URB1	91	48.318	Latimeria_chalumnae
ENSPTIG00000016125	URB1	94	46.547	ENSLOCG00000009190	urb1	87	46.547	Lepisosteus_oculatus
ENSPTIG00000016125	URB1	97	77.464	ENSLAFG00000010407	URB1	91	77.464	Loxodonta_africana
ENSPTIG00000016125	URB1	98	80.089	ENSMFAG00000034391	URB1	89	80.089	Macaca_fascicularis
ENSPTIG00000016125	URB1	97	80.347	ENSMMUG00000010295	URB1	92	79.941	Macaca_mulatta
ENSPTIG00000016125	URB1	98	79.842	ENSMNEG00000032981	URB1	92	79.842	Macaca_nemestrina
ENSPTIG00000016125	URB1	98	80.237	ENSMLEG00000041435	URB1	92	80.237	Mandrillus_leucophaeus
ENSPTIG00000016125	URB1	92	44.603	ENSMAMG00000011238	urb1	85	44.444	Mastacembelus_armatus
ENSPTIG00000016125	URB1	93	42.578	ENSMZEG00005011862	urb1	87	42.578	Maylandia_zebra
ENSPTIG00000016125	URB1	96	57.784	ENSMGAG00000014512	URB1	92	57.685	Meleagris_gallopavo
ENSPTIG00000016125	URB1	91	71.386	ENSMAUG00000010516	Urb1	90	71.001	Mesocricetus_auratus
ENSPTIG00000016125	URB1	98	79.842	ENSMICG00000016424	URB1	92	79.606	Microcebus_murinus
ENSPTIG00000016125	URB1	97	72.376	ENSMOCG00000012613	Urb1	91	72.376	Microtus_ochrogaster
ENSPTIG00000016125	URB1	97	64.124	ENSMODG00000021076	URB1	91	63.976	Monodelphis_domestica
ENSPTIG00000016125	URB1	91	51.872	ENSMALG00000017411	urb1	88	51.872	Monopterus_albus
ENSPTIG00000016125	URB1	98	72.405	MGP_CAROLIEiJ_G0020948	Urb1	91	72.405	Mus_caroli
ENSPTIG00000016125	URB1	98	72.750	ENSMUSG00000039929	Urb1	91	72.750	Mus_musculus
ENSPTIG00000016125	URB1	98	72.700	MGP_PahariEiJ_G0016653	Urb1	91	72.700	Mus_pahari
ENSPTIG00000016125	URB1	98	72.553	MGP_SPRETEiJ_G0021854	Urb1	91	72.553	Mus_spretus
ENSPTIG00000016125	URB1	98	84.122	ENSMPUG00000001123	URB1	94	84.122	Mustela_putorius_furo
ENSPTIG00000016125	URB1	98	73.081	ENSNGAG00000001905	Urb1	93	73.081	Nannospalax_galili
ENSPTIG00000016125	URB1	73	44.294	ENSNBRG00000001049	urb1	84	44.223	Neolamprologus_brichardi
ENSPTIG00000016125	URB1	98	78.068	ENSNLEG00000026872	URB1	92	78.167	Nomascus_leucogenys
ENSPTIG00000016125	URB1	90	63.178	ENSMEUG00000010828	URB1	88	55.832	Notamacropus_eugenii
ENSPTIG00000016125	URB1	98	72.404	ENSOPRG00000013482	URB1	92	72.404	Ochotona_princeps
ENSPTIG00000016125	URB1	98	75.495	ENSODEG00000002587	URB1	93	75.579	Octodon_degus
ENSPTIG00000016125	URB1	94	45.343	ENSONIG00000005599	urb1	89	45.343	Oreochromis_niloticus
ENSPTIG00000016125	URB1	97	78.642	ENSOCUG00000009381	URB1	91	78.642	Oryctolagus_cuniculus
ENSPTIG00000016125	URB1	93	45.153	ENSORLG00000003429	urb1	87	45.153	Oryzias_latipes
ENSPTIG00000016125	URB1	93	45.093	ENSORLG00020013785	urb1	89	44.485	Oryzias_latipes_hni
ENSPTIG00000016125	URB1	93	44.689	ENSORLG00015019421	urb1	86	48.739	Oryzias_latipes_hsok
ENSPTIG00000016125	URB1	81	48.987	ENSOMEG00000002094	urb1	97	48.987	Oryzias_melastigma
ENSPTIG00000016125	URB1	98	79.202	ENSOGAG00000017140	URB1	92	79.202	Otolemur_garnettii
ENSPTIG00000016125	URB1	94	76.678	ENSOARG00000013679	URB1	93	74.765	Ovis_aries
ENSPTIG00000016125	URB1	98	80.532	ENSPPAG00000003423	URB1	92	80.532	Pan_paniscus
ENSPTIG00000016125	URB1	98	95.114	ENSPPRG00000023131	URB1	92	95.114	Panthera_pardus
ENSPTIG00000016125	URB1	98	80.384	ENSPTRG00000013852	URB1	92	80.384	Pan_troglodytes
ENSPTIG00000016125	URB1	98	80.286	ENSPANG00000021964	URB1	92	80.286	Papio_anubis
ENSPTIG00000016125	URB1	94	47.147	ENSPKIG00000003683	urb1	87	46.897	Paramormyrops_kingsleyae
ENSPTIG00000016125	URB1	97	73.492	ENSPEMG00000021205	Urb1	90	73.492	Peromyscus_maniculatus_bairdii
ENSPTIG00000016125	URB1	85	32.931	ENSPMAG00000009733	URB1	99	33.243	Petromyzon_marinus
ENSPTIG00000016125	URB1	98	63.462	ENSPCIG00000016350	URB1	92	63.315	Phascolarctos_cinereus
ENSPTIG00000016125	URB1	92	44.122	ENSPLAG00000004371	urb1	89	44.122	Poecilia_latipinna
ENSPTIG00000016125	URB1	93	44.757	ENSPMEG00000006634	urb1	87	44.757	Poecilia_mexicana
ENSPTIG00000016125	URB1	93	45.140	ENSPREG00000013453	urb1	87	45.155	Poecilia_reticulata
ENSPTIG00000016125	URB1	98	79.941	ENSPPYG00000011359	URB1	92	79.694	Pongo_abelii
ENSPTIG00000016125	URB1	97	65.533	ENSPCAG00000007430	URB1	92	65.533	Procavia_capensis
ENSPTIG00000016125	URB1	98	80.287	ENSPCOG00000022695	URB1	92	80.593	Propithecus_coquereli
ENSPTIG00000016125	URB1	98	79.477	ENSPVAG00000000889	URB1	92	79.477	Pteropus_vampyrus
ENSPTIG00000016125	URB1	92	45.000	ENSPNYG00000010589	urb1	87	45.000	Pundamilia_nyererei
ENSPTIG00000016125	URB1	95	41.384	ENSPNAG00000019324	urb1	90	41.185	Pygocentrus_nattereri
ENSPTIG00000016125	URB1	97	72.427	ENSRNOG00000002080	Urb1	92	72.410	Rattus_norvegicus
ENSPTIG00000016125	URB1	98	79.399	ENSRBIG00000033122	URB1	92	79.399	Rhinopithecus_bieti
ENSPTIG00000016125	URB1	98	79.399	ENSRROG00000040237	URB1	92	79.399	Rhinopithecus_roxellana
ENSPTIG00000016125	URB1	98	80.020	ENSSBOG00000027672	URB1	93	79.536	Saimiri_boliviensis_boliviensis
ENSPTIG00000016125	URB1	97	63.199	ENSSHAG00000005140	URB1	92	63.052	Sarcophilus_harrisii
ENSPTIG00000016125	URB1	95	46.101	ENSSFOG00015000339	urb1	95	46.249	Scleropages_formosus
ENSPTIG00000016125	URB1	93	45.974	ENSSMAG00000003782	urb1	87	45.970	Scophthalmus_maximus
ENSPTIG00000016125	URB1	94	46.448	ENSSDUG00000012313	urb1	88	46.448	Seriola_dumerili
ENSPTIG00000016125	URB1	93	46.570	ENSSLDG00000023179	urb1	87	46.570	Seriola_lalandi_dorsalis
ENSPTIG00000016125	URB1	96	56.543	ENSSPUG00000012447	URB1	91	56.290	Sphenodon_punctatus
ENSPTIG00000016125	URB1	94	44.648	ENSSPAG00000006325	urb1	88	45.450	Stegastes_partitus
ENSPTIG00000016125	URB1	98	79.793	ENSSSCG00000032024	URB1	92	79.497	Sus_scrofa
ENSPTIG00000016125	URB1	79	56.246	ENSTGUG00000013442	URB1	100	56.246	Taeniopygia_guttata
ENSPTIG00000016125	URB1	94	44.472	ENSTRUG00000009372	urb1	88	44.185	Takifugu_rubripes
ENSPTIG00000016125	URB1	94	43.899	ENSTNIG00000016277	urb1	89	43.800	Tetraodon_nigroviridis
ENSPTIG00000016125	URB1	75	84.928	ENSTBEG00000010044	URB1	69	84.928	Tupaia_belangeri
ENSPTIG00000016125	URB1	89	78.579	ENSTTRG00000007712	URB1	85	78.579	Tursiops_truncatus
ENSPTIG00000016125	URB1	97	85.303	ENSUAMG00000012231	URB1	92	85.249	Ursus_americanus
ENSPTIG00000016125	URB1	100	82.692	ENSUMAG00000017419	URB1	99	82.927	Ursus_maritimus
ENSPTIG00000016125	URB1	63	90.476	ENSVPAG00000001164	URB1	60	90.476	Vicugna_pacos
ENSPTIG00000016125	URB1	98	84.813	ENSVVUG00000000551	URB1	92	84.813	Vulpes_vulpes
ENSPTIG00000016125	URB1	95	50.513	ENSXETG00000009895	urb1	88	50.513	Xenopus_tropicalis
ENSPTIG00000016125	URB1	89	45.199	ENSXCOG00000005500	urb1	87	45.276	Xiphophorus_couchianus
ENSPTIG00000016125	URB1	92	42.611	ENSXMAG00000007253	urb1	87	45.156	Xiphophorus_maculatus