EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016141 (Gene tree)
Gene ID: -
Gene Symbol: SF1
Alias: -
Full Name: splicing factor 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 12536 bases
Position: chrKE721980.1:2200095-2212630
Accession: 102958570
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017828	KH_1	PF00013.29	2.2e-07	1	1
ENSPTIP00000017828	zf-CCHC	PF00098.23	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022064	SF1-202	1671	XM_007092085	ENSPTIP00000017828	556 (aa)	XP_007092147	-
ENSPTIT00000022055	SF1-201	333	-	ENSPTIP00000017821	110 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000016141's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016141	SF1	66	82.058	ENSAPOG00000012341	sf1	59	77.751	Acanthochromis_polyacanthus
ENSPTIG00000016141	SF1	80	98.871	ENSAMEG00000017828	SF1	69	98.871	Ailuropoda_melanoleuca
ENSPTIG00000016141	SF1	67	82.493	ENSACIG00000016514	sf1	63	77.305	Amphilophus_citrinellus
ENSPTIG00000016141	SF1	66	81.530	ENSAOCG00000010934	sf1	59	76.794	Amphiprion_ocellaris
ENSPTIG00000016141	SF1	66	81.530	ENSAPEG00000009498	sf1	59	76.794	Amphiprion_percula
ENSPTIG00000016141	SF1	67	81.579	ENSATEG00000001894	sf1	60	77.327	Anabas_testudineus
ENSPTIG00000016141	SF1	77	89.302	ENSANAG00000022607	-	89	88.798	Aotus_nancymaae
ENSPTIG00000016141	SF1	88	100.000	ENSANAG00000026664	-	95	99.007	Aotus_nancymaae
ENSPTIG00000016141	SF1	66	84.282	ENSACLG00000007633	sf1	61	79.562	Astatotilapia_calliptera
ENSPTIG00000016141	SF1	69	83.979	ENSAMXG00000003630	sf1	50	79.218	Astyanax_mexicanus
ENSPTIG00000016141	SF1	80	98.876	ENSBTAG00000001035	SF1	74	98.876	Bos_taurus
ENSPTIG00000016141	SF1	80	98.876	ENSCJAG00000002780	SF1	70	98.876	Callithrix_jacchus
ENSPTIG00000016141	SF1	80	98.876	ENSCAFG00000014239	SF1	70	98.876	Canis_familiaris
ENSPTIG00000016141	SF1	80	98.876	ENSCAFG00020014381	SF1	70	98.876	Canis_lupus_dingo
ENSPTIG00000016141	SF1	80	98.876	ENSCHIG00000025867	SF1	82	98.434	Capra_hircus
ENSPTIG00000016141	SF1	55	98.925	ENSTSYG00000033618	SF1	82	98.925	Carlito_syrichta
ENSPTIG00000016141	SF1	98	89.223	ENSCAPG00000010762	SF1	100	90.179	Cavia_aperea
ENSPTIG00000016141	SF1	92	98.876	ENSCPOG00000012290	SF1	82	98.636	Cavia_porcellus
ENSPTIG00000016141	SF1	74	86.473	ENSCCAG00000023781	-	83	86.400	Cebus_capucinus
ENSPTIG00000016141	SF1	92	100.000	ENSCCAG00000037881	SF1	95	99.256	Cebus_capucinus
ENSPTIG00000016141	SF1	92	100.000	ENSCATG00000011564	SF1	90	99.200	Cercocebus_atys
ENSPTIG00000016141	SF1	80	98.434	ENSCSAG00000007258	SF1	82	98.434	Chlorocebus_sabaeus
ENSPTIG00000016141	SF1	74	93.689	ENSCHOG00000006008	SF1	79	93.780	Choloepus_hoffmanni
ENSPTIG00000016141	SF1	76	89.858	ENSCPBG00000023763	SF1	52	90.931	Chrysemys_picta_bellii
ENSPTIG00000016141	SF1	66	59.946	ENSCING00000005564	-	74	60.372	Ciona_intestinalis
ENSPTIG00000016141	SF1	80	55.042	ENSCSAVG00000009055	-	87	56.438	Ciona_savignyi
ENSPTIG00000016141	SF1	80	98.876	ENSCANG00000042201	SF1	90	99.200	Colobus_angolensis_palliatus
ENSPTIG00000016141	SF1	92	97.333	ENSCGRG00001003677	Sf1	99	89.735	Cricetulus_griseus_chok1gshd
ENSPTIG00000016141	SF1	98	88.869	ENSCGRG00000001708	Sf1	100	89.821	Cricetulus_griseus_crigri
ENSPTIG00000016141	SF1	71	78.571	ENSCSEG00000014375	sf1	57	76.513	Cynoglossus_semilaevis
ENSPTIG00000016141	SF1	67	84.324	ENSCVAG00000001670	sf1	63	78.973	Cyprinodon_variegatus
ENSPTIG00000016141	SF1	70	80.916	ENSDARG00000008188	sf1	70	78.251	Danio_rerio
ENSPTIG00000016141	SF1	80	97.763	ENSDNOG00000001282	SF1	82	97.763	Dasypus_novemcinctus
ENSPTIG00000016141	SF1	91	99.093	ENSDORG00000016334	Sf1	79	99.093	Dipodomys_ordii
ENSPTIG00000016141	SF1	73	89.681	ENSETEG00000012830	SF1	57	88.206	Echinops_telfairi
ENSPTIG00000016141	SF1	80	97.987	ENSEASG00005018272	SF1	82	97.987	Equus_asinus_asinus
ENSPTIG00000016141	SF1	80	98.210	ENSECAG00000024544	SF1	82	98.210	Equus_caballus
ENSPTIG00000016141	SF1	71	99.237	ENSEEUG00000001058	SF1	100	99.237	Erinaceus_europaeus
ENSPTIG00000016141	SF1	66	81.432	ENSELUG00000013225	sf1	54	78.230	Esox_lucius
ENSPTIG00000016141	SF1	80	98.876	ENSFCAG00000012231	SF1	70	98.876	Felis_catus
ENSPTIG00000016141	SF1	98	90.357	ENSFDAG00000009833	SF1	100	90.714	Fukomys_damarensis
ENSPTIG00000016141	SF1	67	80.729	ENSFHEG00000022656	sf1	59	77.251	Fundulus_heteroclitus
ENSPTIG00000016141	SF1	58	87.425	ENSGMOG00000007469	sf1	61	87.425	Gadus_morhua
ENSPTIG00000016141	SF1	66	84.182	ENSGAFG00000019284	sf1	76	80.392	Gambusia_affinis
ENSPTIG00000016141	SF1	69	78.987	ENSGACG00000000826	sf1	67	76.145	Gasterosteus_aculeatus
ENSPTIG00000016141	SF1	76	89.623	ENSGAGG00000021691	SF1	57	90.686	Gopherus_agassizii
ENSPTIG00000016141	SF1	67	82.895	ENSHBUG00000011598	sf1	59	78.436	Haplochromis_burtoni
ENSPTIG00000016141	SF1	99	89.317	ENSHGLG00000009541	SF1	99	90.442	Heterocephalus_glaber_female
ENSPTIG00000016141	SF1	77	86.771	ENSHGLG00100008255	-	85	86.047	Heterocephalus_glaber_male
ENSPTIG00000016141	SF1	98	89.399	ENSHGLG00100013879	-	100	90.536	Heterocephalus_glaber_male
ENSPTIG00000016141	SF1	72	88.972	ENSHGLG00100008076	-	76	86.162	Heterocephalus_glaber_male
ENSPTIG00000016141	SF1	68	81.088	ENSHCOG00000011388	sf1	58	76.755	Hippocampus_comes
ENSPTIG00000016141	SF1	79	99.091	ENSSTOG00000009790	-	70	99.091	Ictidomys_tridecemlineatus
ENSPTIG00000016141	SF1	98	78.142	ENSSTOG00000024353	-	98	78.871	Ictidomys_tridecemlineatus
ENSPTIG00000016141	SF1	80	98.652	ENSJJAG00000011788	Sf1	70	98.652	Jaculus_jaculus
ENSPTIG00000016141	SF1	68	82.990	ENSKMAG00000005854	sf1	63	77.230	Kryptolebias_marmoratus
ENSPTIG00000016141	SF1	67	82.199	ENSLBEG00000019836	sf1	64	78.230	Labrus_bergylta
ENSPTIG00000016141	SF1	74	79.087	ENSLACG00000018493	SF1	74	78.554	Latimeria_chalumnae
ENSPTIG00000016141	SF1	67	84.881	ENSLOCG00000002130	sf1	60	78.657	Lepisosteus_oculatus
ENSPTIG00000016141	SF1	91	98.646	ENSLAFG00000007201	SF1	79	98.646	Loxodonta_africana
ENSPTIG00000016141	SF1	91	100.000	ENSMFAG00000033122	SF1	90	99.200	Macaca_fascicularis
ENSPTIG00000016141	SF1	79	100.000	ENSMMUG00000022606	SF1	99	99.509	Macaca_mulatta
ENSPTIG00000016141	SF1	92	100.000	ENSMNEG00000037901	SF1	90	99.200	Macaca_nemestrina
ENSPTIG00000016141	SF1	91	100.000	ENSMLEG00000040706	SF1	89	99.729	Mandrillus_leucophaeus
ENSPTIG00000016141	SF1	67	81.558	ENSMAMG00000001780	sf1	58	77.966	Mastacembelus_armatus
ENSPTIG00000016141	SF1	67	82.632	ENSMZEG00005009196	sf1	59	78.199	Maylandia_zebra
ENSPTIG00000016141	SF1	99	88.307	ENSMAUG00000014064	Sf1	99	89.558	Mesocricetus_auratus
ENSPTIG00000016141	SF1	80	98.876	ENSMICG00000001202	SF1	95	99.010	Microcebus_murinus
ENSPTIG00000016141	SF1	99	88.482	ENSMOCG00000022038	Sf1	99	89.735	Microtus_ochrogaster
ENSPTIG00000016141	SF1	66	81.720	ENSMMOG00000020474	sf1	60	76.399	Mola_mola
ENSPTIG00000016141	SF1	77	97.892	ENSMODG00000029407	SF1	93	97.892	Monodelphis_domestica
ENSPTIG00000016141	SF1	68	82.011	ENSMALG00000020521	sf1	69	75.644	Monopterus_albus
ENSPTIG00000016141	SF1	99	88.482	MGP_CAROLIEiJ_G0022607	Sf1	100	99.625	Mus_caroli
ENSPTIG00000016141	SF1	99	88.482	ENSMUSG00000024949	Sf1	100	99.625	Mus_musculus
ENSPTIG00000016141	SF1	99	88.133	MGP_PahariEiJ_G0014101	Sf1	100	99.625	Mus_pahari
ENSPTIG00000016141	SF1	99	88.482	MGP_SPRETEiJ_G0023518	Sf1	100	99.625	Mus_spretus
ENSPTIG00000016141	SF1	80	98.874	ENSMPUG00000012684	SF1	69	98.874	Mustela_putorius_furo
ENSPTIG00000016141	SF1	80	93.289	ENSMLUG00000029800	-	71	94.928	Myotis_lucifugus
ENSPTIG00000016141	SF1	80	98.649	ENSMLUG00000015217	-	69	98.649	Myotis_lucifugus
ENSPTIG00000016141	SF1	99	88.042	ENSNGAG00000005550	Sf1	99	90.442	Nannospalax_galili
ENSPTIG00000016141	SF1	67	83.690	ENSNBRG00000017606	sf1	60	79.562	Neolamprologus_brichardi
ENSPTIG00000016141	SF1	92	98.438	ENSNLEG00000005236	-	90	99.200	Nomascus_leucogenys
ENSPTIG00000016141	SF1	78	97.926	ENSMEUG00000013424	SF1	82	97.926	Notamacropus_eugenii
ENSPTIG00000016141	SF1	71	98.489	ENSOPRG00000005008	SF1	80	98.489	Ochotona_princeps
ENSPTIG00000016141	SF1	67	82.895	ENSONIG00000015728	sf1	59	78.436	Oreochromis_niloticus
ENSPTIG00000016141	SF1	64	87.709	ENSOANG00000002909	SF1	84	86.257	Ornithorhynchus_anatinus
ENSPTIG00000016141	SF1	80	98.871	ENSOCUG00000026486	SF1	70	98.871	Oryctolagus_cuniculus
ENSPTIG00000016141	SF1	70	78.750	ENSORLG00000011853	sf1	58	76.739	Oryzias_latipes
ENSPTIG00000016141	SF1	69	80.563	ENSORLG00020011834	sf1	58	76.739	Oryzias_latipes_hni
ENSPTIG00000016141	SF1	69	78.517	ENSORLG00015012855	sf1	59	76.499	Oryzias_latipes_hsok
ENSPTIG00000016141	SF1	67	81.675	ENSOMEG00000005210	sf1	60	77.698	Oryzias_melastigma
ENSPTIG00000016141	SF1	80	98.876	ENSOGAG00000016196	SF1	70	98.876	Otolemur_garnettii
ENSPTIG00000016141	SF1	80	98.876	ENSOARG00000009166	SF1	78	98.876	Ovis_aries
ENSPTIG00000016141	SF1	80	97.528	ENSPPAG00000002799	-	96	99.751	Pan_paniscus
ENSPTIG00000016141	SF1	79	99.093	ENSPPRG00000013566	SF1	69	99.091	Panthera_pardus
ENSPTIG00000016141	SF1	80	98.876	ENSPTRG00000003846	SF1	98	99.289	Pan_troglodytes
ENSPTIG00000016141	SF1	92	100.000	ENSPANG00000020754	SF1	90	99.200	Papio_anubis
ENSPTIG00000016141	SF1	60	78.824	ENSPKIG00000012116	sf1	88	74.499	Paramormyrops_kingsleyae
ENSPTIG00000016141	SF1	57	87.812	ENSPSIG00000003610	SF1	59	87.829	Pelodiscus_sinensis
ENSPTIG00000016141	SF1	99	89.242	ENSPEMG00000010463	Sf1	99	90.088	Peromyscus_maniculatus_bairdii
ENSPTIG00000016141	SF1	60	72.321	ENSPMAG00000008272	sf1	53	66.938	Petromyzon_marinus
ENSPTIG00000016141	SF1	80	97.973	ENSPCIG00000018173	SF1	72	97.973	Phascolarctos_cinereus
ENSPTIG00000016141	SF1	67	85.255	ENSPFOG00000013683	sf1	67	80.630	Poecilia_formosa
ENSPTIG00000016141	SF1	67	83.029	ENSPLAG00000018076	sf1	61	79.187	Poecilia_latipinna
ENSPTIG00000016141	SF1	67	83.029	ENSPMEG00000005726	sf1	62	79.426	Poecilia_mexicana
ENSPTIG00000016141	SF1	67	82.507	ENSPREG00000004155	sf1	59	78.708	Poecilia_reticulata
ENSPTIG00000016141	SF1	80	98.876	ENSPPYG00000003098	-	84	98.434	Pongo_abelii
ENSPTIG00000016141	SF1	79	98.413	ENSPCAG00000013631	SF1	66	98.413	Procavia_capensis
ENSPTIG00000016141	SF1	91	100.000	ENSPCOG00000027546	SF1	95	99.010	Propithecus_coquereli
ENSPTIG00000016141	SF1	79	98.413	ENSPVAG00000016938	SF1	66	98.413	Pteropus_vampyrus
ENSPTIG00000016141	SF1	67	82.632	ENSPNYG00000004673	sf1	59	78.199	Pundamilia_nyererei
ENSPTIG00000016141	SF1	67	85.450	ENSPNAG00000013072	sf1	59	79.805	Pygocentrus_nattereri
ENSPTIG00000016141	SF1	80	98.202	ENSRNOG00000021085	Sf1	74	98.123	Rattus_norvegicus
ENSPTIG00000016141	SF1	99	90.433	ENSRBIG00000042818	SF1	91	98.942	Rhinopithecus_bieti
ENSPTIG00000016141	SF1	98	90.553	ENSRROG00000045655	SF1	92	99.504	Rhinopithecus_roxellana
ENSPTIG00000016141	SF1	53	43.421	YLR116W	MSL5	61	43.182	Saccharomyces_cerevisiae
ENSPTIG00000016141	SF1	83	81.250	ENSSBOG00000022267	-	98	81.220	Saimiri_boliviensis_boliviensis
ENSPTIG00000016141	SF1	72	93.300	ENSSHAG00000006841	SF1	74	94.541	Sarcophilus_harrisii
ENSPTIG00000016141	SF1	71	80.451	ENSSFOG00015021978	sf1	55	76.812	Scleropages_formosus
ENSPTIG00000016141	SF1	74	76.347	ENSSMAG00000007549	sf1	63	76.291	Scophthalmus_maximus
ENSPTIG00000016141	SF1	67	80.679	ENSSDUG00000003903	sf1	62	76.777	Seriola_dumerili
ENSPTIG00000016141	SF1	67	80.679	ENSSLDG00000013075	sf1	60	76.777	Seriola_lalandi_dorsalis
ENSPTIG00000016141	SF1	78	95.392	ENSSARG00000008180	SF1	84	95.392	Sorex_araneus
ENSPTIG00000016141	SF1	73	85.981	ENSSPUG00000012907	SF1	68	85.922	Sphenodon_punctatus
ENSPTIG00000016141	SF1	66	81.530	ENSSPAG00000019060	sf1	58	76.998	Stegastes_partitus
ENSPTIG00000016141	SF1	80	98.652	ENSSSCG00000013021	SF1	82	98.210	Sus_scrofa
ENSPTIG00000016141	SF1	70	71.250	ENSTNIG00000004820	sf1	78	69.359	Tetraodon_nigroviridis
ENSPTIG00000016141	SF1	75	90.625	ENSTBEG00000013133	SF1	61	90.625	Tupaia_belangeri
ENSPTIG00000016141	SF1	79	93.864	ENSTTRG00000008857	SF1	80	94.651	Tursiops_truncatus
ENSPTIG00000016141	SF1	60	94.345	ENSUAMG00000011977	SF1	63	94.345	Ursus_americanus
ENSPTIG00000016141	SF1	98	95.780	ENSUMAG00000007268	SF1	98	95.780	Ursus_maritimus
ENSPTIG00000016141	SF1	62	100.000	ENSVPAG00000011912	SF1	64	100.000	Vicugna_pacos
ENSPTIG00000016141	SF1	80	98.434	ENSVVUG00000028585	SF1	82	98.434	Vulpes_vulpes
ENSPTIG00000016141	SF1	78	80.505	ENSXETG00000008434	sf1	68	81.553	Xenopus_tropicalis
ENSPTIG00000016141	SF1	66	85.205	ENSXCOG00000003704	sf1	75	80.941	Xiphophorus_couchianus
ENSPTIG00000016141	SF1	67	82.292	ENSXMAG00000007822	sf1	61	79.426	Xiphophorus_maculatus