EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016168 (Gene tree)
Gene ID: 102958802
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 59105 bases
Position: chrKE721706.1:4538972-4598076
Accession: 102958802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000017901	HRDC	PF00570.23	4.3e-09	1	1
ENSPTIP00000017912	BDHCT	PF08072.11	9.1e-22	1	1
ENSPTIP00000017901	BDHCT	PF08072.11	1.1e-21	1	1
ENSPTIP00000017912	DEAD	PF00270.29	2.5e-19	1	1
ENSPTIP00000017901	DEAD	PF00270.29	2.8e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022138	BLM-201	4254	XM_015535770	ENSPTIP00000017901	1417 (aa)	XP_015391256	-
ENSPTIT00000022149	BLM-202	3849	-	ENSPTIP00000017912	1282 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000016168's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03440	Homologous recombination	KEGG
ptg03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016168's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016168	BLM	100	81.013	ENSG00000197299	BLM	100	81.013	Homo_sapiens
ENSPTIG00000016168	BLM	59	72.505	ENSAPOG00000017966	blm	66	63.949	Acanthochromis_polyacanthus
ENSPTIG00000016168	BLM	100	85.915	ENSAMEG00000013843	BLM	100	85.915	Ailuropoda_melanoleuca
ENSPTIG00000016168	BLM	59	72.505	ENSACIG00000023762	blm	64	63.636	Amphilophus_citrinellus
ENSPTIG00000016168	BLM	60	72.301	ENSAOCG00000003318	blm	65	64.122	Amphiprion_ocellaris
ENSPTIG00000016168	BLM	60	72.098	ENSAPEG00000018105	blm	64	64.122	Amphiprion_percula
ENSPTIG00000016168	BLM	82	73.320	ENSATEG00000006421	blm	84	65.190	Anabas_testudineus
ENSPTIG00000016168	BLM	80	57.806	ENSAPLG00000006878	BLM	97	57.179	Anas_platyrhynchos
ENSPTIG00000016168	BLM	58	79.919	ENSACAG00000014275	BLM	99	49.294	Anolis_carolinensis
ENSPTIG00000016168	BLM	100	80.352	ENSANAG00000038415	BLM	100	80.423	Aotus_nancymaae
ENSPTIG00000016168	BLM	82	73.320	ENSACLG00000020354	blm	75	73.320	Astatotilapia_calliptera
ENSPTIG00000016168	BLM	55	64.586	ENSAMXG00000016970	blm	59	61.761	Astyanax_mexicanus
ENSPTIG00000016168	BLM	93	84.211	ENSBTAG00000020301	BLM	100	84.211	Bos_taurus
ENSPTIG00000016168	BLM	100	79.677	ENSCJAG00000009803	BLM	100	79.747	Callithrix_jacchus
ENSPTIG00000016168	BLM	100	85.684	ENSCAFG00000012385	BLM	100	85.684	Canis_familiaris
ENSPTIG00000016168	BLM	100	85.614	ENSCAFG00020016111	BLM	96	94.528	Canis_lupus_dingo
ENSPTIG00000016168	BLM	100	82.055	ENSCHIG00000010329	BLM	100	83.882	Capra_hircus
ENSPTIG00000016168	BLM	100	79.410	ENSTSYG00000012368	BLM	100	79.410	Carlito_syrichta
ENSPTIG00000016168	BLM	90	84.119	ENSCAPG00000017976	BLM	99	84.914	Cavia_aperea
ENSPTIG00000016168	BLM	100	75.755	ENSCPOG00000001761	BLM	100	75.721	Cavia_porcellus
ENSPTIG00000016168	BLM	100	79.362	ENSCCAG00000023069	BLM	100	79.485	Cebus_capucinus
ENSPTIG00000016168	BLM	100	80.661	ENSCATG00000040609	BLM	92	94.609	Cercocebus_atys
ENSPTIG00000016168	BLM	100	76.793	ENSCLAG00000012111	BLM	100	77.004	Chinchilla_lanigera
ENSPTIG00000016168	BLM	100	80.406	ENSCSAG00000017040	BLM	100	80.406	Chlorocebus_sabaeus
ENSPTIG00000016168	BLM	86	96.899	ENSCHOG00000006255	BLM	80	96.899	Choloepus_hoffmanni
ENSPTIG00000016168	BLM	89	55.042	ENSCPBG00000025000	BLM	97	72.954	Chrysemys_picta_bellii
ENSPTIG00000016168	BLM	88	71.611	ENSCANG00000034808	BLM	99	72.249	Colobus_angolensis_palliatus
ENSPTIG00000016168	BLM	100	74.755	ENSCGRG00001024897	Blm	100	74.965	Cricetulus_griseus_chok1gshd
ENSPTIG00000016168	BLM	74	70.428	ENSCGRG00000016261	Blm	96	70.742	Cricetulus_griseus_crigri
ENSPTIG00000016168	BLM	70	72.098	ENSCSEG00000013483	blm	69	64.439	Cynoglossus_semilaevis
ENSPTIG00000016168	BLM	99	78.167	ENSDNOG00000010159	BLM	99	78.127	Dasypus_novemcinctus
ENSPTIG00000016168	BLM	74	80.725	ENSDORG00000011033	Blm	100	80.916	Dipodomys_ordii
ENSPTIG00000016168	BLM	50	42.120	FBgn0002906	Blm	52	40.684	Drosophila_melanogaster
ENSPTIG00000016168	BLM	84	85.833	ENSETEG00000015019	BLM	82	85.833	Echinops_telfairi
ENSPTIG00000016168	BLM	100	80.845	ENSEASG00005006727	BLM	100	81.056	Equus_asinus_asinus
ENSPTIG00000016168	BLM	100	82.739	ENSECAG00000011405	BLM	100	82.949	Equus_caballus
ENSPTIG00000016168	BLM	99	74.260	ENSEEUG00000001434	BLM	99	74.260	Erinaceus_europaeus
ENSPTIG00000016168	BLM	75	74.542	ENSELUG00000019098	blm	55	74.542	Esox_lucius
ENSPTIG00000016168	BLM	100	97.107	ENSFCAG00000006087	BLM	100	97.107	Felis_catus
ENSPTIG00000016168	BLM	89	51.913	ENSFALG00000010981	BLM	94	53.536	Ficedula_albicollis
ENSPTIG00000016168	BLM	100	77.358	ENSFDAG00000012658	BLM	100	70.938	Fukomys_damarensis
ENSPTIG00000016168	BLM	50	72.561	ENSFHEG00000002553	blm	57	64.168	Fundulus_heteroclitus
ENSPTIG00000016168	BLM	82	70.468	ENSGMOG00000016431	blm	90	60.382	Gadus_morhua
ENSPTIG00000016168	BLM	93	66.563	ENSGALG00000008256	BLM	87	67.674	Gallus_gallus
ENSPTIG00000016168	BLM	60	72.709	ENSGACG00000010863	blm	100	72.590	Gasterosteus_aculeatus
ENSPTIG00000016168	BLM	88	52.513	ENSGAGG00000005383	BLM	91	77.362	Gopherus_agassizii
ENSPTIG00000016168	BLM	100	80.788	ENSGGOG00000007710	BLM	92	94.906	Gorilla_gorilla
ENSPTIG00000016168	BLM	82	73.320	ENSHBUG00000015943	blm	57	64.268	Haplochromis_burtoni
ENSPTIG00000016168	BLM	100	77.356	ENSHGLG00000013231	BLM	99	77.496	Heterocephalus_glaber_female
ENSPTIG00000016168	BLM	74	54.253	ENSHCOG00000011455	blm	99	54.253	Hippocampus_comes
ENSPTIG00000016168	BLM	74	53.042	ENSIPUG00000000529	blm	68	63.694	Ictalurus_punctatus
ENSPTIG00000016168	BLM	100	77.209	ENSSTOG00000005000	BLM	100	77.560	Ictidomys_tridecemlineatus
ENSPTIG00000016168	BLM	66	85.063	ENSJJAG00000016322	Blm	94	86.321	Jaculus_jaculus
ENSPTIG00000016168	BLM	56	73.523	ENSKMAG00000016608	blm	62	64.713	Kryptolebias_marmoratus
ENSPTIG00000016168	BLM	55	74.414	ENSLACG00000006490	BLM	58	66.549	Latimeria_chalumnae
ENSPTIG00000016168	BLM	86	68.297	ENSLOCG00000014302	blm	86	61.484	Lepisosteus_oculatus
ENSPTIG00000016168	BLM	100	80.661	ENSMFAG00000042982	BLM	92	95.148	Macaca_fascicularis
ENSPTIG00000016168	BLM	100	80.731	ENSMMUG00000019526	BLM	92	95.148	Macaca_mulatta
ENSPTIG00000016168	BLM	98	78.330	ENSMNEG00000031251	BLM	92	94.879	Macaca_nemestrina
ENSPTIG00000016168	BLM	100	78.411	ENSMLEG00000032934	BLM	100	78.411	Mandrillus_leucophaeus
ENSPTIG00000016168	BLM	59	74.134	ENSMAMG00000008726	blm	65	65.526	Mastacembelus_armatus
ENSPTIG00000016168	BLM	82	73.320	ENSMZEG00005022323	blm	62	64.213	Maylandia_zebra
ENSPTIG00000016168	BLM	100	74.580	ENSMAUG00000008953	Blm	99	74.580	Mesocricetus_auratus
ENSPTIG00000016168	BLM	100	79.846	ENSMICG00000034442	BLM	100	79.846	Microcebus_murinus
ENSPTIG00000016168	BLM	100	74.017	ENSMOCG00000016367	Blm	99	73.666	Microtus_ochrogaster
ENSPTIG00000016168	BLM	54	72.967	ENSMMOG00000006959	blm	51	72.967	Mola_mola
ENSPTIG00000016168	BLM	99	63.426	ENSMODG00000019449	BLM	99	63.426	Monodelphis_domestica
ENSPTIG00000016168	BLM	63	73.374	ENSMALG00000007323	blm	68	65.657	Monopterus_albus
ENSPTIG00000016168	BLM	100	72.727	MGP_CAROLIEiJ_G0029907	Blm	100	72.867	Mus_caroli
ENSPTIG00000016168	BLM	100	72.721	ENSMUSG00000030528	Blm	100	72.943	Mus_musculus
ENSPTIG00000016168	BLM	100	73.688	MGP_PahariEiJ_G0013129	Blm	100	73.408	Mus_pahari
ENSPTIG00000016168	BLM	100	73.147	MGP_SPRETEiJ_G0031009	Blm	100	72.867	Mus_spretus
ENSPTIG00000016168	BLM	88	83.085	ENSMPUG00000015657	BLM	99	83.817	Mustela_putorius_furo
ENSPTIG00000016168	BLM	100	78.541	ENSMLUG00000014697	BLM	100	78.962	Myotis_lucifugus
ENSPTIG00000016168	BLM	100	76.301	ENSNGAG00000001275	Blm	100	75.527	Nannospalax_galili
ENSPTIG00000016168	BLM	82	73.320	ENSNBRG00000019702	blm	56	64.213	Neolamprologus_brichardi
ENSPTIG00000016168	BLM	100	79.536	ENSNLEG00000012087	BLM	100	83.302	Nomascus_leucogenys
ENSPTIG00000016168	BLM	99	60.724	ENSMEUG00000007253	BLM	99	60.724	Notamacropus_eugenii
ENSPTIG00000016168	BLM	95	93.793	ENSOPRG00000011667	BLM	99	64.121	Ochotona_princeps
ENSPTIG00000016168	BLM	74	77.895	ENSODEG00000015373	BLM	100	77.895	Octodon_degus
ENSPTIG00000016168	BLM	86	67.091	ENSONIG00000015193	blm	59	60.588	Oreochromis_niloticus
ENSPTIG00000016168	BLM	54	82.161	ENSOANG00000009316	-	99	82.161	Ornithorhynchus_anatinus
ENSPTIG00000016168	BLM	99	73.347	ENSOCUG00000013969	BLM	99	73.347	Oryctolagus_cuniculus
ENSPTIG00000016168	BLM	59	72.912	ENSORLG00000008110	blm	64	65.090	Oryzias_latipes
ENSPTIG00000016168	BLM	59	72.764	ENSORLG00020004812	blm	64	65.217	Oryzias_latipes_hni
ENSPTIG00000016168	BLM	59	73.116	ENSORLG00015018640	blm	78	65.517	Oryzias_latipes_hsok
ENSPTIG00000016168	BLM	50	72.505	ENSOMEG00000023545	blm	64	64.676	Oryzias_melastigma
ENSPTIG00000016168	BLM	100	75.683	ENSOGAG00000005708	BLM	100	74.298	Otolemur_garnettii
ENSPTIG00000016168	BLM	100	81.494	ENSOARG00000012875	BLM	100	81.425	Ovis_aries
ENSPTIG00000016168	BLM	100	80.577	ENSPPAG00000032173	BLM	100	80.577	Pan_paniscus
ENSPTIG00000016168	BLM	100	98.800	ENSPPRG00000002471	BLM	100	98.843	Panthera_pardus
ENSPTIG00000016168	BLM	100	80.507	ENSPTRG00000007460	BLM	100	80.507	Pan_troglodytes
ENSPTIG00000016168	BLM	100	80.919	ENSPANG00000018572	BLM	92	94.879	Papio_anubis
ENSPTIG00000016168	BLM	87	69.287	ENSPKIG00000008954	blm	72	62.662	Paramormyrops_kingsleyae
ENSPTIG00000016168	BLM	51	66.066	ENSPMGG00000006629	blm	80	66.160	Periophthalmus_magnuspinnatus
ENSPTIG00000016168	BLM	100	74.825	ENSPEMG00000017348	Blm	100	74.755	Peromyscus_maniculatus_bairdii
ENSPTIG00000016168	BLM	50	58.123	ENSPMAG00000000445	blm	96	58.322	Petromyzon_marinus
ENSPTIG00000016168	BLM	99	62.842	ENSPCIG00000006609	BLM	99	62.842	Phascolarctos_cinereus
ENSPTIG00000016168	BLM	59	72.764	ENSPFOG00000005059	blm	84	64.322	Poecilia_formosa
ENSPTIG00000016168	BLM	61	72.764	ENSPMEG00000000321	blm	86	64.322	Poecilia_mexicana
ENSPTIG00000016168	BLM	50	72.154	ENSPREG00000007715	blm	56	63.811	Poecilia_reticulata
ENSPTIG00000016168	BLM	100	79.255	ENSPPYG00000006784	BLM	100	79.255	Pongo_abelii
ENSPTIG00000016168	BLM	72	90.909	ENSPCAG00000008960	BLM	73	90.909	Procavia_capensis
ENSPTIG00000016168	BLM	100	77.358	ENSPCOG00000000439	BLM	100	77.778	Propithecus_coquereli
ENSPTIG00000016168	BLM	83	96.486	ENSPVAG00000011642	BLM	88	96.486	Pteropus_vampyrus
ENSPTIG00000016168	BLM	84	52.585	ENSPNYG00000010956	blm	53	52.585	Pundamilia_nyererei
ENSPTIG00000016168	BLM	54	69.742	ENSPNAG00000011714	blm	59	62.543	Pygocentrus_nattereri
ENSPTIG00000016168	BLM	100	72.612	ENSRNOG00000011213	Blm	100	72.402	Rattus_norvegicus
ENSPTIG00000016168	BLM	100	78.888	ENSRBIG00000029656	BLM	92	93.531	Rhinopithecus_bieti
ENSPTIG00000016168	BLM	100	80.169	ENSRROG00000037871	BLM	92	93.531	Rhinopithecus_roxellana
ENSPTIG00000016168	BLM	100	78.605	ENSSBOG00000030957	BLM	100	79.965	Saimiri_boliviensis_boliviensis
ENSPTIG00000016168	BLM	99	63.097	ENSSHAG00000007988	BLM	99	63.097	Sarcophilus_harrisii
ENSPTIG00000016168	BLM	50	73.045	ENSSFOG00015015462	blm	63	63.811	Scleropages_formosus
ENSPTIG00000016168	BLM	54	72.505	ENSSMAG00000001120	blm	60	64.467	Scophthalmus_maximus
ENSPTIG00000016168	BLM	82	73.116	ENSSDUG00000010955	blm	84	65.057	Seriola_dumerili
ENSPTIG00000016168	BLM	50	72.709	ENSSLDG00000000634	blm	84	64.295	Seriola_lalandi_dorsalis
ENSPTIG00000016168	BLM	94	68.456	ENSSARG00000006398	BLM	100	68.456	Sorex_araneus
ENSPTIG00000016168	BLM	74	57.870	ENSSPUG00000000013	BLM	96	55.254	Sphenodon_punctatus
ENSPTIG00000016168	BLM	50	72.301	ENSSPAG00000013999	blm	56	64.286	Stegastes_partitus
ENSPTIG00000016168	BLM	100	81.202	ENSSSCG00000001816	BLM	99	81.132	Sus_scrofa
ENSPTIG00000016168	BLM	79	50.130	ENSTRUG00000019860	blm	67	60.071	Takifugu_rubripes
ENSPTIG00000016168	BLM	72	72.709	ENSTNIG00000019246	blm	66	64.041	Tetraodon_nigroviridis
ENSPTIG00000016168	BLM	77	89.958	ENSTBEG00000006706	BLM	81	82.609	Tupaia_belangeri
ENSPTIG00000016168	BLM	100	84.277	ENSTTRG00000016386	BLM	100	82.911	Tursiops_truncatus
ENSPTIG00000016168	BLM	100	85.775	ENSUMAG00000009105	BLM	97	94.528	Ursus_maritimus
ENSPTIG00000016168	BLM	97	81.767	ENSVPAG00000000085	BLM	99	80.014	Vicugna_pacos
ENSPTIG00000016168	BLM	95	96.110	ENSVVUG00000006402	BLM	100	92.582	Vulpes_vulpes
ENSPTIG00000016168	BLM	99	50.171	ENSXETG00000007847	blm	50	82.099	Xenopus_tropicalis
ENSPTIG00000016168	BLM	50	67.073	ENSXCOG00000020227	blm	55	60.792	Xiphophorus_couchianus
ENSPTIG00000016168	BLM	50	71.951	ENSXMAG00000002951	blm	56	63.729	Xiphophorus_maculatus