EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016527 (Gene tree)
Gene ID: 102962467
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 31585 bases
Position: chrKE721565.1:3100871-3132455
Accession: 102962467
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000018415	POP1	PF06978.11	1.3e-38	1	2
ENSPTIP00000018415	POP1	PF06978.11	1.3e-38	2	2
ENSPTIP00000018415	POPLD	PF08170.12	4.6e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022684	POP1-201	3057	XM_007073297	ENSPTIP00000018415	1018 (aa)	XP_007073359	-

Gene Model

Click here to download ENSPTIG00000016527's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG
ptg03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016527's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016527	POP1	100	84.488	ENSG00000104356	POP1	100	89.071	Homo_sapiens
ENSPTIG00000016527	POP1	100	48.338	ENSAPOG00000008198	pop1	100	47.777	Acanthochromis_polyacanthus
ENSPTIG00000016527	POP1	100	85.840	ENSAMEG00000000556	POP1	100	85.840	Ailuropoda_melanoleuca
ENSPTIG00000016527	POP1	100	47.115	ENSACIG00000004169	POP1	100	47.115	Amphilophus_citrinellus
ENSPTIG00000016527	POP1	100	47.109	ENSAOCG00000010991	pop1	100	47.204	Amphiprion_ocellaris
ENSPTIG00000016527	POP1	91	46.680	ENSAPEG00000007607	pop1	96	47.199	Amphiprion_percula
ENSPTIG00000016527	POP1	100	46.660	ENSATEG00000024814	POP1	100	46.560	Anabas_testudineus
ENSPTIG00000016527	POP1	92	62.222	ENSAPLG00000014418	POP1	99	62.222	Anas_platyrhynchos
ENSPTIG00000016527	POP1	99	56.631	ENSACAG00000016083	POP1	100	56.438	Anolis_carolinensis
ENSPTIG00000016527	POP1	88	87.834	ENSANAG00000026360	POP1	99	87.834	Aotus_nancymaae
ENSPTIG00000016527	POP1	100	47.343	ENSACLG00000010951	pop1	100	47.343	Astatotilapia_calliptera
ENSPTIG00000016527	POP1	100	45.706	ENSAMXG00000014483	POP1	100	45.706	Astyanax_mexicanus
ENSPTIG00000016527	POP1	100	81.532	ENSBTAG00000012596	POP1	100	81.532	Bos_taurus
ENSPTIG00000016527	POP1	100	82.341	ENSCJAG00000015567	POP1	100	82.341	Callithrix_jacchus
ENSPTIG00000016527	POP1	100	86.739	ENSCAFG00000000469	POP1	100	86.739	Canis_familiaris
ENSPTIG00000016527	POP1	100	87.917	ENSCAFG00020026765	POP1	100	87.917	Canis_lupus_dingo
ENSPTIG00000016527	POP1	100	82.515	ENSCHIG00000017066	POP1	100	82.515	Capra_hircus
ENSPTIG00000016527	POP1	100	82.341	ENSTSYG00000003097	POP1	100	82.341	Carlito_syrichta
ENSPTIG00000016527	POP1	100	76.968	ENSCAPG00000007251	POP1	100	76.968	Cavia_aperea
ENSPTIG00000016527	POP1	100	79.317	ENSCPOG00000002901	POP1	100	79.317	Cavia_porcellus
ENSPTIG00000016527	POP1	100	82.537	ENSCCAG00000018939	POP1	94	89.271	Cebus_capucinus
ENSPTIG00000016527	POP1	100	83.805	ENSCATG00000040916	POP1	100	83.805	Cercocebus_atys
ENSPTIG00000016527	POP1	100	80.976	ENSCLAG00000007208	POP1	97	80.976	Chinchilla_lanigera
ENSPTIG00000016527	POP1	90	84.290	ENSCSAG00000012340	POP1	99	84.290	Chlorocebus_sabaeus
ENSPTIG00000016527	POP1	95	79.137	ENSCHOG00000011432	POP1	99	79.137	Choloepus_hoffmanni
ENSPTIG00000016527	POP1	100	65.460	ENSCPBG00000006373	POP1	100	65.171	Chrysemys_picta_bellii
ENSPTIG00000016527	POP1	82	37.743	ENSCING00000008323	-	89	37.743	Ciona_intestinalis
ENSPTIG00000016527	POP1	100	83.902	ENSCANG00000001647	POP1	100	83.902	Colobus_angolensis_palliatus
ENSPTIG00000016527	POP1	100	75.341	ENSCGRG00001017308	Pop1	100	75.341	Cricetulus_griseus_chok1gshd
ENSPTIG00000016527	POP1	100	69.786	ENSCGRG00000010824	Pop1	100	69.786	Cricetulus_griseus_crigri
ENSPTIG00000016527	POP1	100	44.645	ENSCSEG00000008737	POP1	100	45.213	Cynoglossus_semilaevis
ENSPTIG00000016527	POP1	100	47.188	ENSCVAG00000022248	pop1	100	47.188	Cyprinodon_variegatus
ENSPTIG00000016527	POP1	100	78.294	ENSDNOG00000019974	POP1	100	78.294	Dasypus_novemcinctus
ENSPTIG00000016527	POP1	100	69.981	ENSDORG00000015384	Pop1	100	70.468	Dipodomys_ordii
ENSPTIG00000016527	POP1	61	33.281	FBgn0026702	l(1)G0045	70	33.177	Drosophila_melanogaster
ENSPTIG00000016527	POP1	89	69.702	ENSETEG00000007839	POP1	88	69.702	Echinops_telfairi
ENSPTIG00000016527	POP1	100	86.837	ENSEASG00005003189	POP1	98	86.837	Equus_asinus_asinus
ENSPTIG00000016527	POP1	100	86.640	ENSECAG00000024236	POP1	100	86.640	Equus_caballus
ENSPTIG00000016527	POP1	67	83.333	ENSEEUG00000003050	-	70	83.333	Erinaceus_europaeus
ENSPTIG00000016527	POP1	100	46.124	ENSELUG00000003526	pop1	100	47.161	Esox_lucius
ENSPTIG00000016527	POP1	100	98.527	ENSFCAG00000002168	POP1	100	98.527	Felis_catus
ENSPTIG00000016527	POP1	100	59.748	ENSFALG00000005711	POP1	100	59.748	Ficedula_albicollis
ENSPTIG00000016527	POP1	100	79.922	ENSFDAG00000017068	POP1	100	79.922	Fukomys_damarensis
ENSPTIG00000016527	POP1	100	46.316	ENSFHEG00000019518	pop1	100	46.794	Fundulus_heteroclitus
ENSPTIG00000016527	POP1	92	46.798	ENSGMOG00000000659	POP1	97	47.059	Gadus_morhua
ENSPTIG00000016527	POP1	100	46.996	ENSGAFG00000019770	POP1	100	47.030	Gambusia_affinis
ENSPTIG00000016527	POP1	100	46.309	ENSGACG00000003499	pop1	100	46.117	Gasterosteus_aculeatus
ENSPTIG00000016527	POP1	100	64.237	ENSGAGG00000011737	POP1	98	64.043	Gopherus_agassizii
ENSPTIG00000016527	POP1	100	84.293	ENSGGOG00000003176	POP1	100	84.293	Gorilla_gorilla
ENSPTIG00000016527	POP1	100	47.343	ENSHBUG00000021583	pop1	100	47.343	Haplochromis_burtoni
ENSPTIG00000016527	POP1	100	80.488	ENSHGLG00000006029	POP1	100	80.488	Heterocephalus_glaber_female
ENSPTIG00000016527	POP1	100	80.488	ENSHGLG00100016879	POP1	100	80.488	Heterocephalus_glaber_male
ENSPTIG00000016527	POP1	90	49.251	ENSHCOG00000013888	pop1	96	49.143	Hippocampus_comes
ENSPTIG00000016527	POP1	100	45.354	ENSIPUG00000018336	pop1	100	44.206	Ictalurus_punctatus
ENSPTIG00000016527	POP1	100	81.774	ENSSTOG00000011455	POP1	97	81.774	Ictidomys_tridecemlineatus
ENSPTIG00000016527	POP1	100	76.569	ENSJJAG00000013325	Pop1	100	76.569	Jaculus_jaculus
ENSPTIG00000016527	POP1	100	46.743	ENSKMAG00000001346	POP1	100	46.827	Kryptolebias_marmoratus
ENSPTIG00000016527	POP1	89	49.022	ENSLBEG00000024457	POP1	95	48.827	Labrus_bergylta
ENSPTIG00000016527	POP1	93	55.231	ENSLACG00000012498	POP1	99	55.100	Latimeria_chalumnae
ENSPTIG00000016527	POP1	100	51.641	ENSLOCG00000009817	POP1	100	51.635	Lepisosteus_oculatus
ENSPTIG00000016527	POP1	100	82.198	ENSLAFG00000010770	POP1	100	82.198	Loxodonta_africana
ENSPTIG00000016527	POP1	100	83.805	ENSMFAG00000000347	POP1	100	83.805	Macaca_fascicularis
ENSPTIG00000016527	POP1	100	83.707	ENSMNEG00000036870	POP1	100	83.707	Macaca_nemestrina
ENSPTIG00000016527	POP1	100	83.707	ENSMLEG00000034986	POP1	100	83.707	Mandrillus_leucophaeus
ENSPTIG00000016527	POP1	100	47.114	ENSMAMG00000004040	pop1	100	47.433	Mastacembelus_armatus
ENSPTIG00000016527	POP1	100	47.438	ENSMZEG00005025448	pop1	100	47.438	Maylandia_zebra
ENSPTIG00000016527	POP1	100	57.940	ENSMGAG00000012167	POP1	100	58.065	Meleagris_gallopavo
ENSPTIG00000016527	POP1	100	75.828	ENSMAUG00000017537	Pop1	100	75.244	Mesocricetus_auratus
ENSPTIG00000016527	POP1	100	83.220	ENSMICG00000004361	POP1	100	83.610	Microcebus_murinus
ENSPTIG00000016527	POP1	100	75.195	ENSMOCG00000006356	Pop1	100	75.684	Microtus_ochrogaster
ENSPTIG00000016527	POP1	100	43.872	ENSMMOG00000018242	pop1	100	43.872	Mola_mola
ENSPTIG00000016527	POP1	100	68.599	ENSMODG00000006561	POP1	100	67.826	Monodelphis_domestica
ENSPTIG00000016527	POP1	100	47.714	ENSMALG00000012621	POP1	100	47.905	Monopterus_albus
ENSPTIG00000016527	POP1	100	74.732	MGP_CAROLIEiJ_G0019726	Pop1	100	74.732	Mus_caroli
ENSPTIG00000016527	POP1	100	75.610	ENSMUSG00000022325	Pop1	100	75.610	Mus_musculus
ENSPTIG00000016527	POP1	100	75.220	MGP_PahariEiJ_G0019735	Pop1	100	75.220	Mus_pahari
ENSPTIG00000016527	POP1	100	74.927	MGP_SPRETEiJ_G0020622	Pop1	100	74.927	Mus_spretus
ENSPTIG00000016527	POP1	100	87.855	ENSMPUG00000015250	POP1	100	87.855	Mustela_putorius_furo
ENSPTIG00000016527	POP1	100	79.412	ENSMLUG00000010204	POP1	100	79.412	Myotis_lucifugus
ENSPTIG00000016527	POP1	100	79.512	ENSNGAG00000001582	Pop1	100	79.512	Nannospalax_galili
ENSPTIG00000016527	POP1	89	48.276	ENSNBRG00000002356	pop1	94	48.294	Neolamprologus_brichardi
ENSPTIG00000016527	POP1	100	83.512	ENSNLEG00000002541	POP1	100	83.512	Nomascus_leucogenys
ENSPTIG00000016527	POP1	89	70.166	ENSMEUG00000003118	POP1	93	70.166	Notamacropus_eugenii
ENSPTIG00000016527	POP1	100	75.902	ENSOPRG00000007667	POP1	100	75.805	Ochotona_princeps
ENSPTIG00000016527	POP1	100	79.825	ENSODEG00000003984	POP1	100	79.825	Octodon_degus
ENSPTIG00000016527	POP1	100	47.839	ENSONIG00000016445	pop1	100	47.788	Oreochromis_niloticus
ENSPTIG00000016527	POP1	59	69.939	ENSOANG00000001278	-	94	69.939	Ornithorhynchus_anatinus
ENSPTIG00000016527	POP1	100	80.000	ENSOCUG00000017400	POP1	100	80.000	Oryctolagus_cuniculus
ENSPTIG00000016527	POP1	92	48.444	ENSORLG00000002839	pop1	100	46.514	Oryzias_latipes
ENSPTIG00000016527	POP1	90	48.932	ENSORLG00020022450	POP1	96	48.988	Oryzias_latipes_hni
ENSPTIG00000016527	POP1	92	48.745	ENSORLG00015012746	POP1	100	46.686	Oryzias_latipes_hsok
ENSPTIG00000016527	POP1	100	46.543	ENSOMEG00000006915	pop1	99	46.446	Oryzias_melastigma
ENSPTIG00000016527	POP1	100	80.780	ENSOGAG00000001466	POP1	100	80.780	Otolemur_garnettii
ENSPTIG00000016527	POP1	100	84.488	ENSPPAG00000018410	POP1	100	84.488	Pan_paniscus
ENSPTIG00000016527	POP1	100	99.411	ENSPPRG00000005002	POP1	100	99.411	Panthera_pardus
ENSPTIG00000016527	POP1	100	84.488	ENSPTRG00000020458	POP1	100	84.488	Pan_troglodytes
ENSPTIG00000016527	POP1	100	83.610	ENSPANG00000009704	POP1	100	83.610	Papio_anubis
ENSPTIG00000016527	POP1	100	49.277	ENSPKIG00000016325	POP1	100	49.232	Paramormyrops_kingsleyae
ENSPTIG00000016527	POP1	100	63.592	ENSPSIG00000012343	POP1	100	63.398	Pelodiscus_sinensis
ENSPTIG00000016527	POP1	90	49.145	ENSPMGG00000022253	POP1	95	49.679	Periophthalmus_magnuspinnatus
ENSPTIG00000016527	POP1	99	75.264	ENSPEMG00000023633	Pop1	100	75.264	Peromyscus_maniculatus_bairdii
ENSPTIG00000016527	POP1	90	43.487	ENSPMAG00000003209	POP1	100	43.652	Petromyzon_marinus
ENSPTIG00000016527	POP1	100	67.726	ENSPCIG00000012216	POP1	100	67.726	Phascolarctos_cinereus
ENSPTIG00000016527	POP1	100	47.776	ENSPFOG00000012490	POP1	100	47.776	Poecilia_formosa
ENSPTIG00000016527	POP1	100	47.872	ENSPLAG00000004646	POP1	100	47.872	Poecilia_latipinna
ENSPTIG00000016527	POP1	100	47.826	ENSPMEG00000019592	POP1	100	47.826	Poecilia_mexicana
ENSPTIG00000016527	POP1	100	47.573	ENSPREG00000020951	POP1	100	47.573	Poecilia_reticulata
ENSPTIG00000016527	POP1	100	84.293	ENSPPYG00000018777	POP1	100	84.293	Pongo_abelii
ENSPTIG00000016527	POP1	100	76.121	ENSPCAG00000016662	POP1	100	75.341	Procavia_capensis
ENSPTIG00000016527	POP1	100	83.902	ENSPCOG00000019420	POP1	100	84.293	Propithecus_coquereli
ENSPTIG00000016527	POP1	100	84.200	ENSPVAG00000014468	POP1	100	84.200	Pteropus_vampyrus
ENSPTIG00000016527	POP1	89	48.596	ENSPNYG00000004476	pop1	97	47.925	Pundamilia_nyererei
ENSPTIG00000016527	POP1	100	45.480	ENSPNAG00000000265	pop1	100	43.161	Pygocentrus_nattereri
ENSPTIG00000016527	POP1	100	75.146	ENSRNOG00000005243	Pop1	100	75.146	Rattus_norvegicus
ENSPTIG00000016527	POP1	100	83.707	ENSRBIG00000007996	POP1	100	83.707	Rhinopithecus_bieti
ENSPTIG00000016527	POP1	100	83.902	ENSRROG00000012334	POP1	100	83.902	Rhinopithecus_roxellana
ENSPTIG00000016527	POP1	99	83.613	ENSSBOG00000020830	POP1	100	83.613	Saimiri_boliviensis_boliviensis
ENSPTIG00000016527	POP1	100	68.335	ENSSHAG00000000296	POP1	100	68.335	Sarcophilus_harrisii
ENSPTIG00000016527	POP1	100	47.885	ENSSFOG00015007429	pop1	99	47.885	Scleropages_formosus
ENSPTIG00000016527	POP1	86	53.040	ENSSMAG00000010467	POP1	98	48.198	Scophthalmus_maximus
ENSPTIG00000016527	POP1	100	46.964	ENSSDUG00000007817	POP1	100	46.964	Seriola_dumerili
ENSPTIG00000016527	POP1	100	46.553	ENSSLDG00000012565	POP1	100	46.742	Seriola_lalandi_dorsalis
ENSPTIG00000016527	POP1	100	58.949	ENSSPUG00000003550	-	100	59.047	Sphenodon_punctatus
ENSPTIG00000016527	POP1	90	49.193	ENSSPAG00000014955	pop1	94	49.249	Stegastes_partitus
ENSPTIG00000016527	POP1	100	82.220	ENSSSCG00000006078	POP1	100	82.220	Sus_scrofa
ENSPTIG00000016527	POP1	92	55.836	ENSTGUG00000012011	-	100	55.836	Taeniopygia_guttata
ENSPTIG00000016527	POP1	91	47.134	ENSTRUG00000010856	pop1	94	47.078	Takifugu_rubripes
ENSPTIG00000016527	POP1	93	47.870	ENSTNIG00000013297	pop1	99	47.870	Tetraodon_nigroviridis
ENSPTIG00000016527	POP1	95	78.462	ENSTBEG00000014214	POP1	99	78.462	Tupaia_belangeri
ENSPTIG00000016527	POP1	100	81.238	ENSTTRG00000016071	POP1	100	81.238	Tursiops_truncatus
ENSPTIG00000016527	POP1	99	83.201	ENSUAMG00000017309	POP1	100	83.300	Ursus_americanus
ENSPTIG00000016527	POP1	100	85.589	ENSUMAG00000016952	POP1	100	91.498	Ursus_maritimus
ENSPTIG00000016527	POP1	82	86.813	ENSVPAG00000008278	POP1	82	86.813	Vicugna_pacos
ENSPTIG00000016527	POP1	100	88.016	ENSVVUG00000010994	POP1	100	88.016	Vulpes_vulpes
ENSPTIG00000016527	POP1	100	43.324	ENSXCOG00000017043	POP1	100	43.077	Xiphophorus_couchianus
ENSPTIG00000016527	POP1	100	47.190	ENSXMAG00000002472	POP1	100	47.190	Xiphophorus_maculatus