EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016598 (Gene tree)
Gene ID: 102965087
Gene Symbol: POP4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 9321 bases
Position: chrKE722261.1:8914404-8923724
Accession: 102965087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000018485	UPF0086	PF01868.16	3.9e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022760	POP4-201	1267	XM_007096718	ENSPTIP00000018485	220 (aa)	XP_007096780	UPI00042BC8D1

Gene Model

Click here to download ENSPTIG00000016598's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03008	Ribosome biogenesis in eukaryotes	KEGG
ptg03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016598's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016598	POP4	100	88.636	ENSG00000105171	POP4	100	93.750	Homo_sapiens
ENSPTIG00000016598	POP4	97	80.000	ENSAMEG00000003172	-	97	80.000	Ailuropoda_melanoleuca
ENSPTIG00000016598	POP4	99	92.202	ENSAMEG00000018329	-	99	92.627	Ailuropoda_melanoleuca
ENSPTIG00000016598	POP4	89	62.564	ENSACIG00000008358	pop4	93	62.564	Amphilophus_citrinellus
ENSPTIG00000016598	POP4	91	62.745	ENSAOCG00000010116	pop4	99	62.255	Amphiprion_ocellaris
ENSPTIG00000016598	POP4	90	62.376	ENSAPEG00000002829	pop4	85	61.881	Amphiprion_percula
ENSPTIG00000016598	POP4	94	59.809	ENSATEG00000013028	pop4	94	59.615	Anabas_testudineus
ENSPTIG00000016598	POP4	90	73.604	ENSAPLG00000014051	POP4	95	73.604	Anas_platyrhynchos
ENSPTIG00000016598	POP4	100	86.364	ENSANAG00000020295	POP4	100	86.364	Aotus_nancymaae
ENSPTIG00000016598	POP4	89	62.051	ENSACLG00000000526	pop4	88	62.051	Astatotilapia_calliptera
ENSPTIG00000016598	POP4	100	59.545	ENSAMXG00000002899	pop4	100	59.545	Astyanax_mexicanus
ENSPTIG00000016598	POP4	100	90.909	ENSBTAG00000002223	POP4	100	90.909	Bos_taurus
ENSPTIG00000016598	POP4	100	86.425	ENSCJAG00000046750	POP4	100	86.111	Callithrix_jacchus
ENSPTIG00000016598	POP4	83	92.308	ENSCAFG00000007630	POP4	100	92.308	Canis_familiaris
ENSPTIG00000016598	POP4	100	91.818	ENSCHIG00000016743	POP4	100	91.818	Capra_hircus
ENSPTIG00000016598	POP4	100	89.545	ENSTSYG00000003488	POP4	100	89.545	Carlito_syrichta
ENSPTIG00000016598	POP4	99	66.820	ENSCAPG00000011105	POP4	100	66.820	Cavia_aperea
ENSPTIG00000016598	POP4	100	86.364	ENSCPOG00000002992	POP4	100	86.364	Cavia_porcellus
ENSPTIG00000016598	POP4	100	87.727	ENSCCAG00000020285	-	100	87.727	Cebus_capucinus
ENSPTIG00000016598	POP4	100	74.091	ENSCCAG00000034244	-	100	74.091	Cebus_capucinus
ENSPTIG00000016598	POP4	100	90.000	ENSCATG00000036022	POP4	100	95.833	Cercocebus_atys
ENSPTIG00000016598	POP4	100	86.818	ENSCLAG00000013162	POP4	100	86.818	Chinchilla_lanigera
ENSPTIG00000016598	POP4	99	88.991	ENSCSAG00000004868	POP4	100	88.991	Chlorocebus_sabaeus
ENSPTIG00000016598	POP4	98	69.444	ENSCHOG00000002071	POP4	100	69.124	Choloepus_hoffmanni
ENSPTIG00000016598	POP4	100	72.727	ENSCPBG00000016132	POP4	100	72.727	Chrysemys_picta_bellii
ENSPTIG00000016598	POP4	84	33.508	ENSCING00000023871	-	94	33.508	Ciona_intestinalis
ENSPTIG00000016598	POP4	90	90.452	ENSCANG00000005924	POP4	99	90.452	Colobus_angolensis_palliatus
ENSPTIG00000016598	POP4	100	84.091	ENSCGRG00001017185	Pop4	100	83.636	Cricetulus_griseus_chok1gshd
ENSPTIG00000016598	POP4	100	84.091	ENSCGRG00000008155	Pop4	100	83.636	Cricetulus_griseus_crigri
ENSPTIG00000016598	POP4	94	54.327	ENSCSEG00000002946	pop4	94	54.327	Cynoglossus_semilaevis
ENSPTIG00000016598	POP4	93	42.718	ENSCVAG00000018602	POP4	85	42.347	Cyprinodon_variegatus
ENSPTIG00000016598	POP4	100	61.818	ENSDARG00000101472	pop4	100	61.818	Danio_rerio
ENSPTIG00000016598	POP4	100	87.727	ENSDNOG00000047663	POP4	88	87.727	Dasypus_novemcinctus
ENSPTIG00000016598	POP4	78	83.721	ENSDORG00000008577	Pop4	100	83.721	Dipodomys_ordii
ENSPTIG00000016598	POP4	67	38.710	FBgn0035831	CG8038	70	38.621	Drosophila_melanogaster
ENSPTIG00000016598	POP4	99	73.272	ENSETEG00000003607	POP4	100	73.272	Echinops_telfairi
ENSPTIG00000016598	POP4	100	39.485	ENSEBUG00000004305	pop4	100	39.056	Eptatretus_burgeri
ENSPTIG00000016598	POP4	100	42.081	ENSEBUG00000008575	pop4	100	42.081	Eptatretus_burgeri
ENSPTIG00000016598	POP4	91	46.262	ENSEBUG00000010447	pop4	83	45.794	Eptatretus_burgeri
ENSPTIG00000016598	POP4	100	90.385	ENSECAG00000020206	POP4	82	90.385	Equus_caballus
ENSPTIG00000016598	POP4	90	68.528	ENSEEUG00000013109	POP4	99	68.528	Erinaceus_europaeus
ENSPTIG00000016598	POP4	89	65.306	ENSELUG00000019812	pop4	89	63.776	Esox_lucius
ENSPTIG00000016598	POP4	100	99.545	ENSFCAG00000001619	POP4	100	99.545	Felis_catus
ENSPTIG00000016598	POP4	98	68.519	ENSFALG00000000206	POP4	96	68.519	Ficedula_albicollis
ENSPTIG00000016598	POP4	100	88.636	ENSFDAG00000017859	POP4	100	88.636	Fukomys_damarensis
ENSPTIG00000016598	POP4	90	58.000	ENSFHEG00000012745	pop4	90	57.500	Fundulus_heteroclitus
ENSPTIG00000016598	POP4	90	60.396	ENSGMOG00000000335	pop4	99	59.901	Gadus_morhua
ENSPTIG00000016598	POP4	100	68.182	ENSGALG00000041972	POP4	92	68.182	Gallus_gallus
ENSPTIG00000016598	POP4	78	50.575	ENSGAFG00000003571	pop4	96	50.575	Gambusia_affinis
ENSPTIG00000016598	POP4	99	57.399	ENSGACG00000014510	pop4	93	65.116	Gasterosteus_aculeatus
ENSPTIG00000016598	POP4	100	73.636	ENSGAGG00000024544	POP4	79	73.636	Gopherus_agassizii
ENSPTIG00000016598	POP4	99	88.073	ENSGGOG00000038346	POP4	99	88.479	Gorilla_gorilla
ENSPTIG00000016598	POP4	89	62.051	ENSHBUG00000021821	pop4	88	62.051	Haplochromis_burtoni
ENSPTIG00000016598	POP4	99	88.073	ENSHGLG00000015798	POP4	99	88.073	Heterocephalus_glaber_female
ENSPTIG00000016598	POP4	100	87.727	ENSHGLG00100009737	POP4	100	87.727	Heterocephalus_glaber_male
ENSPTIG00000016598	POP4	89	62.564	ENSHCOG00000020937	pop4	88	62.564	Hippocampus_comes
ENSPTIG00000016598	POP4	100	59.545	ENSIPUG00000013652	pop4	100	59.545	Ictalurus_punctatus
ENSPTIG00000016598	POP4	100	90.000	ENSSTOG00000011016	POP4	100	90.000	Ictidomys_tridecemlineatus
ENSPTIG00000016598	POP4	100	88.636	ENSJJAG00000013376	Pop4	100	88.636	Jaculus_jaculus
ENSPTIG00000016598	POP4	98	60.092	ENSKMAG00000012250	pop4	98	59.633	Kryptolebias_marmoratus
ENSPTIG00000016598	POP4	99	55.856	ENSLBEG00000018846	-	99	55.455	Labrus_bergylta
ENSPTIG00000016598	POP4	99	55.856	ENSLBEG00000014139	pop4	99	55.455	Labrus_bergylta
ENSPTIG00000016598	POP4	100	63.636	ENSLACG00000008581	POP4	98	64.516	Latimeria_chalumnae
ENSPTIG00000016598	POP4	100	68.182	ENSLOCG00000005597	pop4	100	68.182	Lepisosteus_oculatus
ENSPTIG00000016598	POP4	100	88.182	ENSLAFG00000000084	POP4	100	88.182	Loxodonta_africana
ENSPTIG00000016598	POP4	100	89.545	ENSMFAG00000029606	POP4	100	89.545	Macaca_fascicularis
ENSPTIG00000016598	POP4	100	88.235	ENSMMUG00000017424	POP4	100	86.425	Macaca_mulatta
ENSPTIG00000016598	POP4	100	88.235	ENSMNEG00000031374	POP4	100	86.425	Macaca_nemestrina
ENSPTIG00000016598	POP4	100	89.545	ENSMLEG00000043454	POP4	100	89.545	Mandrillus_leucophaeus
ENSPTIG00000016598	POP4	85	64.362	ENSMAMG00000011716	pop4	92	59.722	Mastacembelus_armatus
ENSPTIG00000016598	POP4	89	62.051	ENSMZEG00005002360	pop4	88	62.051	Maylandia_zebra
ENSPTIG00000016598	POP4	99	68.807	ENSMGAG00000005337	POP4	97	68.807	Meleagris_gallopavo
ENSPTIG00000016598	POP4	100	85.455	ENSMAUG00000020110	Pop4	100	85.455	Mesocricetus_auratus
ENSPTIG00000016598	POP4	99	84.862	ENSMICG00000035730	POP4	98	84.862	Microcebus_murinus
ENSPTIG00000016598	POP4	94	61.353	ENSMMOG00000015321	pop4	93	61.650	Mola_mola
ENSPTIG00000016598	POP4	98	80.093	ENSMODG00000029406	POP4	94	80.093	Monodelphis_domestica
ENSPTIG00000016598	POP4	95	62.857	ENSMALG00000012571	pop4	95	62.857	Monopterus_albus
ENSPTIG00000016598	POP4	100	82.353	MGP_CAROLIEiJ_G0029600	Pop4	100	81.900	Mus_caroli
ENSPTIG00000016598	POP4	100	82.805	ENSMUSG00000030423	Pop4	100	81.900	Mus_musculus
ENSPTIG00000016598	POP4	100	82.727	MGP_SPRETEiJ_G0030699	Pop4	100	81.818	Mus_spretus
ENSPTIG00000016598	POP4	100	92.727	ENSMPUG00000008041	-	100	92.727	Mustela_putorius_furo
ENSPTIG00000016598	POP4	100	78.733	ENSMPUG00000008063	-	100	78.733	Mustela_putorius_furo
ENSPTIG00000016598	POP4	99	68.950	ENSMLUG00000010774	POP4	99	68.950	Myotis_lucifugus
ENSPTIG00000016598	POP4	57	80.800	ENSMEUG00000003636	-	100	80.800	Notamacropus_eugenii
ENSPTIG00000016598	POP4	90	89.394	ENSOPRG00000004736	POP4	99	89.394	Ochotona_princeps
ENSPTIG00000016598	POP4	99	87.097	ENSODEG00000013025	POP4	100	87.264	Octodon_degus
ENSPTIG00000016598	POP4	89	61.538	ENSONIG00000003458	pop4	87	61.538	Oreochromis_niloticus
ENSPTIG00000016598	POP4	100	88.182	ENSOCUG00000015974	POP4	100	88.182	Oryctolagus_cuniculus
ENSPTIG00000016598	POP4	90	58.794	ENSORLG00000020317	pop4	90	58.291	Oryzias_latipes
ENSPTIG00000016598	POP4	94	57.212	ENSORLG00015011624	pop4	93	56.731	Oryzias_latipes_hsok
ENSPTIG00000016598	POP4	90	60.804	ENSOMEG00000002538	pop4	89	60.302	Oryzias_melastigma
ENSPTIG00000016598	POP4	99	86.697	ENSOGAG00000011168	POP4	99	86.697	Otolemur_garnettii
ENSPTIG00000016598	POP4	100	91.403	ENSOARG00000004041	POP4	100	91.403	Ovis_aries
ENSPTIG00000016598	POP4	100	88.636	ENSPPAG00000040372	POP4	100	88.636	Pan_paniscus
ENSPTIG00000016598	POP4	100	99.545	ENSPPRG00000010502	POP4	100	99.545	Panthera_pardus
ENSPTIG00000016598	POP4	100	88.636	ENSPTRG00000010779	POP4	100	88.636	Pan_troglodytes
ENSPTIG00000016598	POP4	100	89.545	ENSPANG00000008546	POP4	100	89.545	Papio_anubis
ENSPTIG00000016598	POP4	89	69.697	ENSPKIG00000004468	pop4	87	69.192	Paramormyrops_kingsleyae
ENSPTIG00000016598	POP4	100	73.182	ENSPSIG00000015690	POP4	98	77.778	Pelodiscus_sinensis
ENSPTIG00000016598	POP4	90	58.621	ENSPMGG00000008608	pop4	97	58.128	Periophthalmus_magnuspinnatus
ENSPTIG00000016598	POP4	99	69.725	ENSPEMG00000019982	-	100	69.725	Peromyscus_maniculatus_bairdii
ENSPTIG00000016598	POP4	100	83.182	ENSPEMG00000014034	-	96	83.182	Peromyscus_maniculatus_bairdii
ENSPTIG00000016598	POP4	66	67.586	ENSPMAG00000006265	pop4	94	55.914	Petromyzon_marinus
ENSPTIG00000016598	POP4	100	79.091	ENSPCIG00000024738	POP4	95	79.091	Phascolarctos_cinereus
ENSPTIG00000016598	POP4	98	55.300	ENSPFOG00000000925	pop4	98	55.300	Poecilia_formosa
ENSPTIG00000016598	POP4	98	55.300	ENSPLAG00000003161	pop4	88	60.204	Poecilia_latipinna
ENSPTIG00000016598	POP4	98	55.300	ENSPMEG00000002475	pop4	98	55.300	Poecilia_mexicana
ENSPTIG00000016598	POP4	90	58.794	ENSPREG00000022403	pop4	86	58.794	Poecilia_reticulata
ENSPTIG00000016598	POP4	100	89.091	ENSPPYG00000009805	POP4	100	89.091	Pongo_abelii
ENSPTIG00000016598	POP4	99	78.995	ENSPCAG00000007737	POP4	99	78.995	Procavia_capensis
ENSPTIG00000016598	POP4	100	89.091	ENSPCOG00000018055	POP4	100	89.091	Propithecus_coquereli
ENSPTIG00000016598	POP4	100	87.273	ENSPVAG00000006069	POP4	100	87.273	Pteropus_vampyrus
ENSPTIG00000016598	POP4	89	62.564	ENSPNYG00000020038	pop4	88	62.564	Pundamilia_nyererei
ENSPTIG00000016598	POP4	100	61.364	ENSPNAG00000005591	pop4	100	61.364	Pygocentrus_nattereri
ENSPTIG00000016598	POP4	100	84.163	ENSRNOG00000027646	Pop4	100	83.710	Rattus_norvegicus
ENSPTIG00000016598	POP4	80	84.571	ENSRBIG00000044769	POP4	89	86.957	Rhinopithecus_bieti
ENSPTIG00000016598	POP4	100	89.091	ENSRROG00000028903	POP4	100	89.091	Rhinopithecus_roxellana
ENSPTIG00000016598	POP4	100	87.273	ENSSBOG00000032445	POP4	100	87.273	Saimiri_boliviensis_boliviensis
ENSPTIG00000016598	POP4	99	77.982	ENSSHAG00000016888	POP4	99	77.982	Sarcophilus_harrisii
ENSPTIG00000016598	POP4	89	68.367	ENSSFOG00015014556	pop4	87	67.857	Scleropages_formosus
ENSPTIG00000016598	POP4	93	62.559	ENSSMAG00000016611	pop4	99	62.085	Scophthalmus_maximus
ENSPTIG00000016598	POP4	94	61.244	ENSSDUG00000019865	pop4	84	60.766	Seriola_dumerili
ENSPTIG00000016598	POP4	94	60.766	ENSSLDG00000001763	pop4	93	60.577	Seriola_lalandi_dorsalis
ENSPTIG00000016598	POP4	99	87.097	ENSSARG00000004748	POP4	100	87.097	Sorex_araneus
ENSPTIG00000016598	POP4	94	62.019	ENSSPAG00000014364	pop4	93	61.538	Stegastes_partitus
ENSPTIG00000016598	POP4	100	91.364	ENSSSCG00000002854	POP4	100	91.364	Sus_scrofa
ENSPTIG00000016598	POP4	90	73.232	ENSTGUG00000008953	POP4	99	73.232	Taeniopygia_guttata
ENSPTIG00000016598	POP4	89	63.776	ENSTNIG00000006401	pop4	97	63.776	Tetraodon_nigroviridis
ENSPTIG00000016598	POP4	100	89.140	ENSTBEG00000002194	POP4	100	89.140	Tupaia_belangeri
ENSPTIG00000016598	POP4	100	88.636	ENSTTRG00000005882	POP4	100	88.636	Tursiops_truncatus
ENSPTIG00000016598	POP4	100	93.182	ENSUAMG00000003049	-	100	93.182	Ursus_americanus
ENSPTIG00000016598	POP4	100	93.182	ENSUMAG00000007522	-	100	93.182	Ursus_maritimus
ENSPTIG00000016598	POP4	92	91.089	ENSVVUG00000016876	-	71	91.089	Vulpes_vulpes
ENSPTIG00000016598	POP4	98	65.741	ENSXETG00000017598	pop4	98	65.741	Xenopus_tropicalis
ENSPTIG00000016598	POP4	90	58.706	ENSXCOG00000017695	pop4	86	58.209	Xiphophorus_couchianus
ENSPTIG00000016598	POP4	90	58.706	ENSXMAG00000013862	pop4	86	58.209	Xiphophorus_maculatus