EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000016601 (Gene tree)
Gene ID: 102949550
Gene Symbol: CNOT4
Alias: -
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 146557 bases
Position: chrKE721673.1:359076-505632
Accession: 102949550
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000018743	RRM_1	PF00076.22	6.8e-06	1	1
ENSPTIP00000018720	RRM_1	PF00076.22	7.5e-06	1	1
ENSPTIP00000018706	RRM_1	PF00076.22	9.2e-06	1	1
ENSPTIP00000018697	RRM_1	PF00076.22	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000022991	CNOT4-202	3796	XM_007076262	ENSPTIP00000018706	639 (aa)	XP_007076324	UPI00042BB71A
ENSPTIT00000022980	CNOT4-201	4009	XM_007076260	ENSPTIP00000018697	710 (aa)	XP_007076322	UPI00042BEE4A
ENSPTIT00000023006	CNOT4-203	3186	XM_007076264	ENSPTIP00000018720	572 (aa)	XP_007076326	UPI00005A2FF4
ENSPTIT00000023015	CNOT4-204	3786	-	ENSPTIP00000018730	684 (aa)	-	-
ENSPTIT00000023028	CNOT4-205	1302	-	ENSPTIP00000018743	433 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000016601's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016601's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016601	CNOT4	100	99.476	ENSG00000080802	CNOT4	100	99.476	Homo_sapiens
ENSPTIG00000016601	CNOT4	96	89.299	ENSAPOG00000016272	cnot4a	95	77.960	Acanthochromis_polyacanthus
ENSPTIG00000016601	CNOT4	97	98.841	ENSAMEG00000012081	CNOT4	91	99.535	Ailuropoda_melanoleuca
ENSPTIG00000016601	CNOT4	100	64.545	ENSACIG00000003011	cnot4a	100	60.595	Amphilophus_citrinellus
ENSPTIG00000016601	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSPTIG00000016601	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSPTIG00000016601	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSPTIG00000016601	CNOT4	100	88.320	ENSAPLG00000016441	CNOT4	100	88.320	Anas_platyrhynchos
ENSPTIG00000016601	CNOT4	100	88.189	ENSACAG00000011154	CNOT4	100	88.189	Anolis_carolinensis
ENSPTIG00000016601	CNOT4	100	99.650	ENSANAG00000032156	CNOT4	100	99.650	Aotus_nancymaae
ENSPTIG00000016601	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSPTIG00000016601	CNOT4	96	83.610	ENSAMXG00000001373	cnot4a	100	72.171	Astyanax_mexicanus
ENSPTIG00000016601	CNOT4	100	92.620	ENSAMXG00000011473	cnot4b	100	72.024	Astyanax_mexicanus
ENSPTIG00000016601	CNOT4	100	98.957	ENSBTAG00000017919	CNOT4	100	98.957	Bos_taurus
ENSPTIG00000016601	CNOT4	100	99.650	ENSCJAG00000012532	CNOT4	100	99.650	Callithrix_jacchus
ENSPTIG00000016601	CNOT4	100	100.000	ENSCAFG00000003223	CNOT4	100	100.000	Canis_familiaris
ENSPTIG00000016601	CNOT4	100	100.000	ENSCAFG00020000093	CNOT4	100	100.000	Canis_lupus_dingo
ENSPTIG00000016601	CNOT4	100	99.825	ENSCHIG00000010955	CNOT4	100	99.825	Capra_hircus
ENSPTIG00000016601	CNOT4	100	99.825	ENSTSYG00000000893	CNOT4	100	99.825	Carlito_syrichta
ENSPTIG00000016601	CNOT4	99	97.059	ENSCAPG00000006213	CNOT4	100	95.352	Cavia_aperea
ENSPTIG00000016601	CNOT4	100	98.601	ENSCPOG00000011526	CNOT4	100	98.601	Cavia_porcellus
ENSPTIG00000016601	CNOT4	100	98.957	ENSCCAG00000024414	CNOT4	100	98.957	Cebus_capucinus
ENSPTIG00000016601	CNOT4	100	98.957	ENSCATG00000022607	CNOT4	100	98.957	Cercocebus_atys
ENSPTIG00000016601	CNOT4	100	99.126	ENSCLAG00000001857	CNOT4	100	99.126	Chinchilla_lanigera
ENSPTIG00000016601	CNOT4	100	99.155	ENSCSAG00000009096	CNOT4	100	99.155	Chlorocebus_sabaeus
ENSPTIG00000016601	CNOT4	70	99.465	ENSCHOG00000010412	CNOT4	65	99.465	Choloepus_hoffmanni
ENSPTIG00000016601	CNOT4	100	95.372	ENSCPBG00000004959	CNOT4	100	95.372	Chrysemys_picta_bellii
ENSPTIG00000016601	CNOT4	64	69.323	ENSCING00000004364	-	89	42.523	Ciona_intestinalis
ENSPTIG00000016601	CNOT4	100	99.476	ENSCANG00000029319	CNOT4	100	99.476	Colobus_angolensis_palliatus
ENSPTIG00000016601	CNOT4	100	98.783	ENSCGRG00001014651	Cnot4	100	98.783	Cricetulus_griseus_chok1gshd
ENSPTIG00000016601	CNOT4	100	99.476	ENSCGRG00000005727	Cnot4	100	99.476	Cricetulus_griseus_crigri
ENSPTIG00000016601	CNOT4	96	89.299	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSPTIG00000016601	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	100	74.080	Cyprinodon_variegatus
ENSPTIG00000016601	CNOT4	96	75.676	ENSDARG00000007045	cnot4a	100	69.870	Danio_rerio
ENSPTIG00000016601	CNOT4	96	73.967	ENSDARG00000007639	cnot4b	100	66.049	Danio_rerio
ENSPTIG00000016601	CNOT4	100	97.616	ENSDNOG00000009409	CNOT4	100	97.616	Dasypus_novemcinctus
ENSPTIG00000016601	CNOT4	100	98.783	ENSDORG00000012268	Cnot4	100	98.783	Dipodomys_ordii
ENSPTIG00000016601	CNOT4	100	92.146	ENSETEG00000013407	CNOT4	89	94.643	Echinops_telfairi
ENSPTIG00000016601	CNOT4	100	98.609	ENSEASG00005014430	CNOT4	100	98.609	Equus_asinus_asinus
ENSPTIG00000016601	CNOT4	100	98.609	ENSECAG00000020262	CNOT4	100	98.609	Equus_caballus
ENSPTIG00000016601	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSPTIG00000016601	CNOT4	100	73.669	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSPTIG00000016601	CNOT4	100	100.000	ENSFCAG00000011904	CNOT4	100	100.000	Felis_catus
ENSPTIG00000016601	CNOT4	100	88.845	ENSFALG00000011194	CNOT4	100	88.845	Ficedula_albicollis
ENSPTIG00000016601	CNOT4	100	98.783	ENSFDAG00000013525	CNOT4	100	98.783	Fukomys_damarensis
ENSPTIG00000016601	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	100	73.141	Fundulus_heteroclitus
ENSPTIG00000016601	CNOT4	96	65.235	ENSGMOG00000001329	cnot4a	97	60.618	Gadus_morhua
ENSPTIG00000016601	CNOT4	100	94.670	ENSGALG00000011682	CNOT4	100	94.670	Gallus_gallus
ENSPTIG00000016601	CNOT4	96	82.578	ENSGACG00000004276	cnot4a	91	90.189	Gasterosteus_aculeatus
ENSPTIG00000016601	CNOT4	100	94.811	ENSGAGG00000017331	CNOT4	100	94.811	Gopherus_agassizii
ENSPTIG00000016601	CNOT4	92	98.974	ENSGGOG00000000142	CNOT4	99	98.974	Gorilla_gorilla
ENSPTIG00000016601	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSPTIG00000016601	CNOT4	100	98.783	ENSHGLG00000011533	CNOT4	100	98.783	Heterocephalus_glaber_female
ENSPTIG00000016601	CNOT4	100	98.783	ENSHGLG00100013058	CNOT4	100	98.783	Heterocephalus_glaber_male
ENSPTIG00000016601	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSPTIG00000016601	CNOT4	100	91.481	ENSIPUG00000006393	cnot4	91	91.481	Ictalurus_punctatus
ENSPTIG00000016601	CNOT4	96	81.710	ENSIPUG00000016994	cnot4b	100	70.772	Ictalurus_punctatus
ENSPTIG00000016601	CNOT4	100	99.825	ENSSTOG00000007717	CNOT4	100	99.825	Ictidomys_tridecemlineatus
ENSPTIG00000016601	CNOT4	100	81.818	ENSJJAG00000019991	-	100	81.818	Jaculus_jaculus
ENSPTIG00000016601	CNOT4	100	99.476	ENSJJAG00000016618	Cnot4	100	99.476	Jaculus_jaculus
ENSPTIG00000016601	CNOT4	96	89.299	ENSKMAG00000004581	cnot4a	100	73.282	Kryptolebias_marmoratus
ENSPTIG00000016601	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSPTIG00000016601	CNOT4	100	83.405	ENSLACG00000002647	CNOT4	99	83.405	Latimeria_chalumnae
ENSPTIG00000016601	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSPTIG00000016601	CNOT4	100	97.195	ENSLAFG00000000709	CNOT4	100	97.195	Loxodonta_africana
ENSPTIG00000016601	CNOT4	100	99.650	ENSMFAG00000046349	CNOT4	100	99.650	Macaca_fascicularis
ENSPTIG00000016601	CNOT4	100	98.957	ENSMMUG00000016181	CNOT4	100	98.957	Macaca_mulatta
ENSPTIG00000016601	CNOT4	100	99.650	ENSMNEG00000042164	CNOT4	100	99.650	Macaca_nemestrina
ENSPTIG00000016601	CNOT4	100	99.650	ENSMLEG00000032709	CNOT4	100	99.650	Mandrillus_leucophaeus
ENSPTIG00000016601	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSPTIG00000016601	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSPTIG00000016601	CNOT4	100	88.189	ENSMGAG00000011788	CNOT4	100	88.189	Meleagris_gallopavo
ENSPTIG00000016601	CNOT4	100	98.783	ENSMAUG00000020415	Cnot4	100	98.783	Mesocricetus_auratus
ENSPTIG00000016601	CNOT4	100	99.304	ENSMICG00000001667	CNOT4	100	99.304	Microcebus_murinus
ENSPTIG00000016601	CNOT4	100	98.609	ENSMOCG00000020955	Cnot4	100	98.609	Microtus_ochrogaster
ENSPTIG00000016601	CNOT4	96	82.578	ENSMMOG00000014565	cnot4a	97	75.418	Mola_mola
ENSPTIG00000016601	CNOT4	100	96.761	ENSMODG00000014068	CNOT4	100	96.761	Monodelphis_domestica
ENSPTIG00000016601	CNOT4	96	89.299	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSPTIG00000016601	CNOT4	100	99.129	MGP_CAROLIEiJ_G0028217	Cnot4	100	99.129	Mus_caroli
ENSPTIG00000016601	CNOT4	100	99.301	ENSMUSG00000038784	Cnot4	100	99.301	Mus_musculus
ENSPTIG00000016601	CNOT4	100	99.301	MGP_PahariEiJ_G0021974	Cnot4	100	99.301	Mus_pahari
ENSPTIG00000016601	CNOT4	100	98.951	MGP_SPRETEiJ_G0029216	Cnot4	100	98.951	Mus_spretus
ENSPTIG00000016601	CNOT4	100	99.718	ENSMPUG00000004089	CNOT4	100	99.718	Mustela_putorius_furo
ENSPTIG00000016601	CNOT4	100	98.598	ENSMLUG00000008260	CNOT4	100	98.598	Myotis_lucifugus
ENSPTIG00000016601	CNOT4	100	98.609	ENSNGAG00000015030	Cnot4	100	98.609	Nannospalax_galili
ENSPTIG00000016601	CNOT4	96	79.714	ENSNBRG00000021144	cnot4a	100	71.752	Neolamprologus_brichardi
ENSPTIG00000016601	CNOT4	100	98.442	ENSNLEG00000013352	CNOT4	100	98.442	Nomascus_leucogenys
ENSPTIG00000016601	CNOT4	88	97.733	ENSOPRG00000001023	CNOT4	82	97.733	Ochotona_princeps
ENSPTIG00000016601	CNOT4	100	98.087	ENSODEG00000012975	CNOT4	100	98.087	Octodon_degus
ENSPTIG00000016601	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSPTIG00000016601	CNOT4	100	95.787	ENSOANG00000005006	CNOT4	100	95.787	Ornithorhynchus_anatinus
ENSPTIG00000016601	CNOT4	100	99.014	ENSOCUG00000013448	CNOT4	100	99.014	Oryctolagus_cuniculus
ENSPTIG00000016601	CNOT4	96	84.010	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSPTIG00000016601	CNOT4	96	84.010	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSPTIG00000016601	CNOT4	96	84.010	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSPTIG00000016601	CNOT4	96	84.010	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSPTIG00000016601	CNOT4	100	98.738	ENSOGAG00000015499	CNOT4	100	98.738	Otolemur_garnettii
ENSPTIG00000016601	CNOT4	100	98.036	ENSOARG00000008803	CNOT4	100	98.036	Ovis_aries
ENSPTIG00000016601	CNOT4	100	98.609	ENSPPAG00000041937	CNOT4	100	98.609	Pan_paniscus
ENSPTIG00000016601	CNOT4	100	99.304	ENSPPRG00000023940	CNOT4	100	99.304	Panthera_pardus
ENSPTIG00000016601	CNOT4	100	98.609	ENSPTRG00000019727	CNOT4	100	98.609	Pan_troglodytes
ENSPTIG00000016601	CNOT4	100	98.783	ENSPANG00000017724	CNOT4	100	98.783	Papio_anubis
ENSPTIG00000016601	CNOT4	96	82.339	ENSPKIG00000018137	cnot4a	100	72.006	Paramormyrops_kingsleyae
ENSPTIG00000016601	CNOT4	100	87.418	ENSPSIG00000011256	CNOT4	100	87.418	Pelodiscus_sinensis
ENSPTIG00000016601	CNOT4	96	82.100	ENSPMGG00000005671	cnot4a	100	73.374	Periophthalmus_magnuspinnatus
ENSPTIG00000016601	CNOT4	100	98.609	ENSPEMG00000021566	Cnot4	100	98.609	Peromyscus_maniculatus_bairdii
ENSPTIG00000016601	CNOT4	100	96.870	ENSPCIG00000029622	CNOT4	96	96.338	Phascolarctos_cinereus
ENSPTIG00000016601	CNOT4	63	88.321	ENSPFOG00000002228	cnot4a	51	90.566	Poecilia_formosa
ENSPTIG00000016601	CNOT4	96	83.055	ENSPLAG00000001780	cnot4a	100	73.059	Poecilia_latipinna
ENSPTIG00000016601	CNOT4	96	83.055	ENSPMEG00000006852	cnot4a	100	73.059	Poecilia_mexicana
ENSPTIG00000016601	CNOT4	96	82.578	ENSPREG00000008171	cnot4a	100	70.549	Poecilia_reticulata
ENSPTIG00000016601	CNOT4	100	99.014	ENSPPYG00000018026	CNOT4	100	99.014	Pongo_abelii
ENSPTIG00000016601	CNOT4	100	100.000	ENSPCOG00000019907	CNOT4	100	100.000	Propithecus_coquereli
ENSPTIG00000016601	CNOT4	96	99.519	ENSPVAG00000004905	CNOT4	90	96.667	Pteropus_vampyrus
ENSPTIG00000016601	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSPTIG00000016601	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	74.738	Pygocentrus_nattereri
ENSPTIG00000016601	CNOT4	96	91.513	ENSPNAG00000020433	cnot4a	100	72.268	Pygocentrus_nattereri
ENSPTIG00000016601	CNOT4	100	97.606	ENSRNOG00000010795	Cnot4	100	97.606	Rattus_norvegicus
ENSPTIG00000016601	CNOT4	100	98.957	ENSRBIG00000043977	CNOT4	100	98.957	Rhinopithecus_bieti
ENSPTIG00000016601	CNOT4	100	99.476	ENSSBOG00000020808	CNOT4	100	99.476	Saimiri_boliviensis_boliviensis
ENSPTIG00000016601	CNOT4	100	96.620	ENSSHAG00000013639	CNOT4	100	96.620	Sarcophilus_harrisii
ENSPTIG00000016601	CNOT4	100	90.074	ENSSFOG00015002019	cnot4a	91	90.074	Scleropages_formosus
ENSPTIG00000016601	CNOT4	100	91.912	ENSSFOG00015017285	CNOT4	92	91.912	Scleropages_formosus
ENSPTIG00000016601	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSPTIG00000016601	CNOT4	96	83.095	ENSSDUG00000018585	cnot4b	100	71.296	Seriola_dumerili
ENSPTIG00000016601	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSPTIG00000016601	CNOT4	100	61.765	ENSSLDG00000014347	cnot4b	100	52.005	Seriola_lalandi_dorsalis
ENSPTIG00000016601	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSPTIG00000016601	CNOT4	100	95.327	ENSSPUG00000004677	CNOT4	100	95.327	Sphenodon_punctatus
ENSPTIG00000016601	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSPTIG00000016601	CNOT4	100	99.825	ENSSSCG00000021354	CNOT4	100	99.825	Sus_scrofa
ENSPTIG00000016601	CNOT4	100	88.845	ENSTGUG00000009161	CNOT4	100	88.845	Taeniopygia_guttata
ENSPTIG00000016601	CNOT4	100	89.259	ENSTRUG00000016861	cnot4a	92	89.259	Takifugu_rubripes
ENSPTIG00000016601	CNOT4	96	79.714	ENSTNIG00000016000	cnot4a	100	69.919	Tetraodon_nigroviridis
ENSPTIG00000016601	CNOT4	96	97.115	ENSTBEG00000002202	CNOT4	86	93.452	Tupaia_belangeri
ENSPTIG00000016601	CNOT4	96	99.519	ENSTTRG00000005122	CNOT4	90	97.829	Tursiops_truncatus
ENSPTIG00000016601	CNOT4	100	99.304	ENSUAMG00000026759	CNOT4	100	99.304	Ursus_americanus
ENSPTIG00000016601	CNOT4	100	99.304	ENSUMAG00000015351	CNOT4	100	99.304	Ursus_maritimus
ENSPTIG00000016601	CNOT4	100	99.844	ENSVVUG00000006200	CNOT4	100	99.844	Vulpes_vulpes
ENSPTIG00000016601	CNOT4	100	98.519	ENSXETG00000010594	cnot4	92	98.519	Xenopus_tropicalis
ENSPTIG00000016601	CNOT4	96	79.817	ENSXCOG00000020824	cnot4a	98	71.822	Xiphophorus_couchianus
ENSPTIG00000016601	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus