EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000016794 (Gene tree)
Gene ID: 102961768
Gene Symbol: CNOT6
Alias: -
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 76383 bases
Position: chrKE721773.1:789376-865758
Accession: 102961768
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000018754	Exo_endo_phos	PF03372.23	1.1e-21	1	1
ENSPTIP00000018767	Exo_endo_phos	PF03372.23	1.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000023040	CNOT6-201	6015	-	ENSPTIP00000018754	557 (aa)	-	UPI00042BD3CF
ENSPTIT00000023053	CNOT6-202	5512	XM_007083066	ENSPTIP00000018767	557 (aa)	XP_007083128	UPI00042BD3CF

Gene Model

Click here to download ENSPTIG00000016794's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000016794	CNOT6	100	79.533	ENSPTIG00000015698	CNOT6L	99	79.533

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016794	CNOT6	100	97.846	ENSG00000113300	CNOT6	100	100.000	Homo_sapiens
ENSPTIG00000016794	CNOT6	100	87.120	ENSAPOG00000009994	cnot6b	100	87.120	Acanthochromis_polyacanthus
ENSPTIG00000016794	CNOT6	100	99.106	ENSAMEG00000000949	CNOT6	99	99.106	Ailuropoda_melanoleuca
ENSPTIG00000016794	CNOT6	100	85.868	ENSACIG00000016566	cnot6b	100	85.868	Amphilophus_citrinellus
ENSPTIG00000016794	CNOT6	100	87.120	ENSAOCG00000006893	cnot6b	100	87.120	Amphiprion_ocellaris
ENSPTIG00000016794	CNOT6	100	87.120	ENSAPEG00000016949	cnot6b	100	87.120	Amphiprion_percula
ENSPTIG00000016794	CNOT6	100	85.152	ENSATEG00000007862	cnot6b	100	85.152	Anabas_testudineus
ENSPTIG00000016794	CNOT6	100	96.409	ENSAPLG00000012715	CNOT6	99	96.409	Anas_platyrhynchos
ENSPTIG00000016794	CNOT6	100	94.075	ENSACAG00000016548	CNOT6	100	94.075	Anolis_carolinensis
ENSPTIG00000016794	CNOT6	100	98.205	ENSANAG00000030436	CNOT6	96	98.205	Aotus_nancymaae
ENSPTIG00000016794	CNOT6	100	85.152	ENSACLG00000008279	cnot6b	100	86.047	Astatotilapia_calliptera
ENSPTIG00000016794	CNOT6	100	85.305	ENSAMXG00000034694	cnot6b	100	85.305	Astyanax_mexicanus
ENSPTIG00000016794	CNOT6	100	87.097	ENSAMXG00000019140	cnot6a	100	87.097	Astyanax_mexicanus
ENSPTIG00000016794	CNOT6	100	98.743	ENSBTAG00000017362	CNOT6	100	98.743	Bos_taurus
ENSPTIG00000016794	CNOT6	100	98.025	ENSCJAG00000009795	CNOT6	100	98.025	Callithrix_jacchus
ENSPTIG00000016794	CNOT6	100	99.461	ENSCAFG00000000464	CNOT6	100	99.461	Canis_familiaris
ENSPTIG00000016794	CNOT6	100	99.461	ENSCAFG00020002441	CNOT6	100	99.461	Canis_lupus_dingo
ENSPTIG00000016794	CNOT6	100	98.384	ENSCHIG00000019100	CNOT6	100	98.384	Capra_hircus
ENSPTIG00000016794	CNOT6	100	96.230	ENSTSYG00000003982	CNOT6	100	96.230	Carlito_syrichta
ENSPTIG00000016794	CNOT6	100	92.819	ENSCPOG00000035657	CNOT6	100	92.819	Cavia_porcellus
ENSPTIG00000016794	CNOT6	100	93.537	ENSCCAG00000033670	CNOT6	100	93.537	Cebus_capucinus
ENSPTIG00000016794	CNOT6	100	97.846	ENSCATG00000042014	CNOT6	100	97.846	Cercocebus_atys
ENSPTIG00000016794	CNOT6	100	96.409	ENSCLAG00000010489	CNOT6	100	96.409	Chinchilla_lanigera
ENSPTIG00000016794	CNOT6	100	97.846	ENSCSAG00000008165	CNOT6	100	97.846	Chlorocebus_sabaeus
ENSPTIG00000016794	CNOT6	100	96.948	ENSCHOG00000009680	CNOT6	100	96.948	Choloepus_hoffmanni
ENSPTIG00000016794	CNOT6	100	96.050	ENSCPBG00000008908	CNOT6	100	96.050	Chrysemys_picta_bellii
ENSPTIG00000016794	CNOT6	100	98.025	ENSCANG00000026756	CNOT6	100	98.025	Colobus_angolensis_palliatus
ENSPTIG00000016794	CNOT6	100	95.691	ENSCGRG00001011452	Cnot6	100	95.691	Cricetulus_griseus_chok1gshd
ENSPTIG00000016794	CNOT6	100	94.075	ENSCGRG00000010407	Cnot6	100	94.075	Cricetulus_griseus_crigri
ENSPTIG00000016794	CNOT6	100	86.225	ENSCSEG00000010939	cnot6b	100	86.225	Cynoglossus_semilaevis
ENSPTIG00000016794	CNOT6	100	85.842	ENSCVAG00000010538	cnot6b	100	85.842	Cyprinodon_variegatus
ENSPTIG00000016794	CNOT6	100	86.201	ENSDARG00000008255	cnot6a	100	86.201	Danio_rerio
ENSPTIG00000016794	CNOT6	100	84.767	ENSDARG00000101072	cnot6b	100	84.767	Danio_rerio
ENSPTIG00000016794	CNOT6	100	97.487	ENSDNOG00000041644	CNOT6	100	97.487	Dasypus_novemcinctus
ENSPTIG00000016794	CNOT6	100	86.715	ENSDORG00000001708	Cnot6	100	86.715	Dipodomys_ordii
ENSPTIG00000016794	CNOT6	100	77.996	ENSETEG00000006975	CNOT6	100	77.996	Echinops_telfairi
ENSPTIG00000016794	CNOT6	100	98.205	ENSEASG00005012794	-	100	98.205	Equus_asinus_asinus
ENSPTIG00000016794	CNOT6	90	92.600	ENSEASG00005012957	-	99	92.600	Equus_asinus_asinus
ENSPTIG00000016794	CNOT6	100	92.280	ENSECAG00000012704	-	99	92.280	Equus_caballus
ENSPTIG00000016794	CNOT6	100	98.923	ENSECAG00000019325	CNOT6	100	98.923	Equus_caballus
ENSPTIG00000016794	CNOT6	100	97.666	ENSEEUG00000015382	CNOT6	100	97.666	Erinaceus_europaeus
ENSPTIG00000016794	CNOT6	100	83.422	ENSELUG00000015981	cnot6b	99	83.422	Esox_lucius
ENSPTIG00000016794	CNOT6	100	82.616	ENSELUG00000024580	cnot6a	100	82.616	Esox_lucius
ENSPTIG00000016794	CNOT6	100	99.820	ENSFCAG00000001881	CNOT6	100	99.820	Felis_catus
ENSPTIG00000016794	CNOT6	100	96.409	ENSFALG00000007699	CNOT6	100	96.409	Ficedula_albicollis
ENSPTIG00000016794	CNOT6	100	96.230	ENSFDAG00000001999	CNOT6	100	96.230	Fukomys_damarensis
ENSPTIG00000016794	CNOT6	65	88.095	ENSFHEG00000013756	cnot6b	94	92.308	Fundulus_heteroclitus
ENSPTIG00000016794	CNOT6	95	85.255	ENSGMOG00000009767	cnot6b	99	85.255	Gadus_morhua
ENSPTIG00000016794	CNOT6	100	96.409	ENSGALG00000034316	CNOT6	100	96.409	Gallus_gallus
ENSPTIG00000016794	CNOT6	100	86.022	ENSGAFG00000008525	cnot6b	100	86.022	Gambusia_affinis
ENSPTIG00000016794	CNOT6	95	83.365	ENSGACG00000018046	cnot6b	99	83.365	Gasterosteus_aculeatus
ENSPTIG00000016794	CNOT6	100	80.251	ENSGAGG00000012176	CNOT6	100	80.251	Gopherus_agassizii
ENSPTIG00000016794	CNOT6	100	97.846	ENSGGOG00000003675	CNOT6	100	97.846	Gorilla_gorilla
ENSPTIG00000016794	CNOT6	100	85.331	ENSHBUG00000002819	cnot6b	100	86.225	Haplochromis_burtoni
ENSPTIG00000016794	CNOT6	100	96.589	ENSHGLG00000017756	CNOT6	100	96.589	Heterocephalus_glaber_female
ENSPTIG00000016794	CNOT6	100	96.589	ENSHGLG00100005747	CNOT6	100	96.589	Heterocephalus_glaber_male
ENSPTIG00000016794	CNOT6	100	84.079	ENSHCOG00000016176	cnot6b	100	84.973	Hippocampus_comes
ENSPTIG00000016794	CNOT6	100	84.946	ENSIPUG00000017482	cnot6b	100	84.946	Ictalurus_punctatus
ENSPTIG00000016794	CNOT6	100	86.225	ENSIPUG00000019831	cnot6a	100	86.225	Ictalurus_punctatus
ENSPTIG00000016794	CNOT6	100	97.487	ENSSTOG00000002803	CNOT6	100	97.487	Ictidomys_tridecemlineatus
ENSPTIG00000016794	CNOT6	100	96.050	ENSJJAG00000012296	Cnot6	100	96.050	Jaculus_jaculus
ENSPTIG00000016794	CNOT6	100	86.918	ENSKMAG00000004640	cnot6b	100	86.918	Kryptolebias_marmoratus
ENSPTIG00000016794	CNOT6	100	84.258	ENSLBEG00000027917	cnot6b	100	85.152	Labrus_bergylta
ENSPTIG00000016794	CNOT6	100	90.143	ENSLOCG00000010102	cnot6b	99	90.143	Lepisosteus_oculatus
ENSPTIG00000016794	CNOT6	100	98.205	ENSLAFG00000016742	CNOT6	100	98.205	Loxodonta_africana
ENSPTIG00000016794	CNOT6	100	97.846	ENSMFAG00000030867	CNOT6	100	97.846	Macaca_fascicularis
ENSPTIG00000016794	CNOT6	100	97.846	ENSMMUG00000018690	CNOT6	100	97.846	Macaca_mulatta
ENSPTIG00000016794	CNOT6	100	97.846	ENSMNEG00000038565	CNOT6	100	97.846	Macaca_nemestrina
ENSPTIG00000016794	CNOT6	100	97.846	ENSMLEG00000010555	CNOT6	100	97.846	Mandrillus_leucophaeus
ENSPTIG00000016794	CNOT6	100	87.299	ENSMAMG00000007515	cnot6b	100	87.299	Mastacembelus_armatus
ENSPTIG00000016794	CNOT6	100	85.152	ENSMZEG00005012899	cnot6b	100	86.047	Maylandia_zebra
ENSPTIG00000016794	CNOT6	100	96.768	ENSMAUG00000019798	Cnot6	100	96.768	Mesocricetus_auratus
ENSPTIG00000016794	CNOT6	100	96.589	ENSMICG00000013018	-	100	96.589	Microcebus_murinus
ENSPTIG00000016794	CNOT6	98	87.868	ENSMICG00000028378	-	99	87.868	Microcebus_murinus
ENSPTIG00000016794	CNOT6	100	96.768	ENSMOCG00000021662	Cnot6	100	96.768	Microtus_ochrogaster
ENSPTIG00000016794	CNOT6	100	84.409	ENSMMOG00000003227	cnot6b	100	84.409	Mola_mola
ENSPTIG00000016794	CNOT6	100	96.409	ENSMODG00000003979	CNOT6	100	96.409	Monodelphis_domestica
ENSPTIG00000016794	CNOT6	100	86.941	ENSMALG00000014251	cnot6b	100	86.941	Monopterus_albus
ENSPTIG00000016794	CNOT6	100	96.948	MGP_CAROLIEiJ_G0016277	Cnot6	100	96.948	Mus_caroli
ENSPTIG00000016794	CNOT6	100	96.948	ENSMUSG00000020362	Cnot6	100	96.948	Mus_musculus
ENSPTIG00000016794	CNOT6	100	96.948	MGP_PahariEiJ_G0017413	Cnot6	100	96.948	Mus_pahari
ENSPTIG00000016794	CNOT6	100	96.589	MGP_SPRETEiJ_G0017122	Cnot6	100	96.589	Mus_spretus
ENSPTIG00000016794	CNOT6	100	99.282	ENSMPUG00000000587	CNOT6	96	99.282	Mustela_putorius_furo
ENSPTIG00000016794	CNOT6	100	96.085	ENSMLUG00000010257	CNOT6	100	96.085	Myotis_lucifugus
ENSPTIG00000016794	CNOT6	100	95.691	ENSNGAG00000008269	Cnot6	100	95.691	Nannospalax_galili
ENSPTIG00000016794	CNOT6	100	85.331	ENSNBRG00000010798	cnot6b	100	86.225	Neolamprologus_brichardi
ENSPTIG00000016794	CNOT6	100	96.409	ENSNLEG00000002322	CNOT6	100	96.409	Nomascus_leucogenys
ENSPTIG00000016794	CNOT6	81	96.262	ENSMEUG00000000025	CNOT6	81	96.262	Notamacropus_eugenii
ENSPTIG00000016794	CNOT6	88	96.181	ENSOPRG00000008244	-	88	96.181	Ochotona_princeps
ENSPTIG00000016794	CNOT6	100	95.512	ENSODEG00000007041	CNOT6	100	95.512	Octodon_degus
ENSPTIG00000016794	CNOT6	75	85.343	ENSONIG00000013027	cnot6b	99	85.343	Oreochromis_niloticus
ENSPTIG00000016794	CNOT6	100	95.332	ENSOANG00000010226	CNOT6	100	95.332	Ornithorhynchus_anatinus
ENSPTIG00000016794	CNOT6	100	96.780	ENSOCUG00000011083	CNOT6	100	96.780	Oryctolagus_cuniculus
ENSPTIG00000016794	CNOT6	100	85.689	ENSORLG00000005059	cnot6b	100	85.689	Oryzias_latipes
ENSPTIG00000016794	CNOT6	100	85.689	ENSORLG00020012784	cnot6b	100	85.689	Oryzias_latipes_hni
ENSPTIG00000016794	CNOT6	94	84.895	ENSORLG00015022658	cnot6b	98	84.895	Oryzias_latipes_hsok
ENSPTIG00000016794	CNOT6	100	85.868	ENSOMEG00000005295	cnot6b	100	85.868	Oryzias_melastigma
ENSPTIG00000016794	CNOT6	94	97.710	ENSOGAG00000032470	CNOT6	100	97.710	Otolemur_garnettii
ENSPTIG00000016794	CNOT6	97	98.155	ENSOARG00000001003	CNOT6	100	98.155	Ovis_aries
ENSPTIG00000016794	CNOT6	100	97.846	ENSPPAG00000032253	CNOT6	100	97.846	Pan_paniscus
ENSPTIG00000016794	CNOT6	100	100.000	ENSPPRG00000011912	CNOT6	100	100.000	Panthera_pardus
ENSPTIG00000016794	CNOT6	100	97.846	ENSPTRG00000017636	CNOT6	100	97.846	Pan_troglodytes
ENSPTIG00000016794	CNOT6	100	97.846	ENSPANG00000016191	CNOT6	100	97.846	Papio_anubis
ENSPTIG00000016794	CNOT6	100	86.918	ENSPKIG00000021368	cnot6b	100	86.918	Paramormyrops_kingsleyae
ENSPTIG00000016794	CNOT6	98	96.324	ENSPSIG00000017307	CNOT6	100	96.324	Pelodiscus_sinensis
ENSPTIG00000016794	CNOT6	100	85.689	ENSPMGG00000011238	cnot6b	100	85.689	Periophthalmus_magnuspinnatus
ENSPTIG00000016794	CNOT6	100	95.871	ENSPEMG00000000627	Cnot6	100	95.871	Peromyscus_maniculatus_bairdii
ENSPTIG00000016794	CNOT6	100	96.230	ENSPCIG00000020319	CNOT6	99	96.230	Phascolarctos_cinereus
ENSPTIG00000016794	CNOT6	100	85.842	ENSPFOG00000006291	cnot6b	100	85.842	Poecilia_formosa
ENSPTIG00000016794	CNOT6	100	82.258	ENSPLAG00000008266	cnot6b	100	82.258	Poecilia_latipinna
ENSPTIG00000016794	CNOT6	100	86.022	ENSPMEG00000009091	cnot6b	100	86.022	Poecilia_mexicana
ENSPTIG00000016794	CNOT6	100	84.767	ENSPREG00000003713	cnot6b	100	84.767	Poecilia_reticulata
ENSPTIG00000016794	CNOT6	100	97.846	ENSPPYG00000016137	CNOT6	100	97.846	Pongo_abelii
ENSPTIG00000016794	CNOT6	71	96.617	ENSPCAG00000005599	-	71	96.617	Procavia_capensis
ENSPTIG00000016794	CNOT6	100	92.280	ENSPCOG00000017359	CNOT6	100	92.998	Propithecus_coquereli
ENSPTIG00000016794	CNOT6	100	93.357	ENSPVAG00000003069	CNOT6	100	93.357	Pteropus_vampyrus
ENSPTIG00000016794	CNOT6	100	84.973	ENSPNYG00000000321	cnot6b	100	85.868	Pundamilia_nyererei
ENSPTIG00000016794	CNOT6	100	85.484	ENSPNAG00000028816	cnot6b	100	85.484	Pygocentrus_nattereri
ENSPTIG00000016794	CNOT6	100	87.097	ENSPNAG00000029586	cnot6a	100	87.097	Pygocentrus_nattereri
ENSPTIG00000016794	CNOT6	100	95.871	ENSRNOG00000054891	Cnot6	100	95.871	Rattus_norvegicus
ENSPTIG00000016794	CNOT6	100	97.846	ENSRBIG00000004309	CNOT6	100	97.846	Rhinopithecus_bieti
ENSPTIG00000016794	CNOT6	100	97.846	ENSRROG00000035378	CNOT6	100	97.846	Rhinopithecus_roxellana
ENSPTIG00000016794	CNOT6	100	98.025	ENSSBOG00000030494	CNOT6	100	98.025	Saimiri_boliviensis_boliviensis
ENSPTIG00000016794	CNOT6	100	96.230	ENSSHAG00000017436	CNOT6	100	96.230	Sarcophilus_harrisii
ENSPTIG00000016794	CNOT6	100	86.380	ENSSFOG00015022383	cnot6a	96	86.380	Scleropages_formosus
ENSPTIG00000016794	CNOT6	100	88.351	ENSSFOG00015015133	CNOT6	100	88.351	Scleropages_formosus
ENSPTIG00000016794	CNOT6	100	84.973	ENSSMAG00000003084	cnot6b	100	84.973	Scophthalmus_maximus
ENSPTIG00000016794	CNOT6	100	86.762	ENSSDUG00000004151	cnot6b	100	86.762	Seriola_dumerili
ENSPTIG00000016794	CNOT6	100	86.047	ENSSLDG00000004448	cnot6b	100	86.941	Seriola_lalandi_dorsalis
ENSPTIG00000016794	CNOT6	64	77.095	ENSSARG00000012650	-	100	77.095	Sorex_araneus
ENSPTIG00000016794	CNOT6	100	95.512	ENSSPUG00000007893	CNOT6	100	95.512	Sphenodon_punctatus
ENSPTIG00000016794	CNOT6	100	86.941	ENSSPAG00000000149	cnot6b	100	86.941	Stegastes_partitus
ENSPTIG00000016794	CNOT6	100	98.564	ENSSSCG00000014009	CNOT6	100	98.701	Sus_scrofa
ENSPTIG00000016794	CNOT6	100	96.050	ENSTGUG00000001119	CNOT6	100	96.050	Taeniopygia_guttata
ENSPTIG00000016794	CNOT6	100	84.381	ENSTRUG00000002818	cnot6b	100	84.381	Takifugu_rubripes
ENSPTIG00000016794	CNOT6	100	84.740	ENSTNIG00000004443	cnot6b	99	84.740	Tetraodon_nigroviridis
ENSPTIG00000016794	CNOT6	87	67.351	ENSTBEG00000017094	-	100	67.351	Tupaia_belangeri
ENSPTIG00000016794	CNOT6	100	98.743	ENSTTRG00000009363	CNOT6	100	98.743	Tursiops_truncatus
ENSPTIG00000016794	CNOT6	77	99.301	ENSUAMG00000004579	CNOT6	88	99.301	Ursus_americanus
ENSPTIG00000016794	CNOT6	100	94.692	ENSUMAG00000024577	CNOT6	100	94.692	Ursus_maritimus
ENSPTIG00000016794	CNOT6	83	97.196	ENSVPAG00000003593	CNOT6	83	97.196	Vicugna_pacos
ENSPTIG00000016794	CNOT6	100	99.461	ENSVVUG00000026940	CNOT6	100	99.461	Vulpes_vulpes
ENSPTIG00000016794	CNOT6	100	82.616	ENSXCOG00000003360	cnot6b	100	82.616	Xiphophorus_couchianus
ENSPTIG00000016794	CNOT6	100	86.022	ENSXMAG00000008730	cnot6b	100	86.022	Xiphophorus_maculatus