EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000016894 (Gene tree)
Gene ID: 102967624
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 19515 bases
Position: chrKE721904.1:1218886-1238400
Accession: 102967624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000018929	Nop52	PF05997.12	3.1e-59	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000023220	RRP1B-201	1788	XM_015540870	ENSPTIP00000018929	595 (aa)	XP_015396356	-

Gene Model

Click here to download ENSPTIG00000016894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000016894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000016894	RRP1B	56	42.815	ENSPTIG00000019473	RRP1	74	43.620

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000016894	RRP1B	97	74.074	ENSG00000160208	RRP1B	81	73.086	Homo_sapiens
ENSPTIG00000016894	RRP1B	74	47.287	ENSAPOG00000007490	-	50	42.415	Acanthochromis_polyacanthus
ENSPTIG00000016894	RRP1B	55	48.632	ENSAMEG00000011448	RRP1	71	48.632	Ailuropoda_melanoleuca
ENSPTIG00000016894	RRP1B	88	83.206	ENSAMEG00000011401	RRP1B	70	83.969	Ailuropoda_melanoleuca
ENSPTIG00000016894	RRP1B	66	52.000	ENSAOCG00000017894	-	84	52.041	Amphiprion_ocellaris
ENSPTIG00000016894	RRP1B	74	43.750	ENSAPEG00000024150	-	50	43.963	Amphiprion_percula
ENSPTIG00000016894	RRP1B	76	61.475	ENSAPLG00000004310	RRP1B	64	55.891	Anas_platyrhynchos
ENSPTIG00000016894	RRP1B	84	52.584	ENSACAG00000017851	RRP1B	62	52.584	Anolis_carolinensis
ENSPTIG00000016894	RRP1B	97	67.171	ENSANAG00000034889	RRP1B	89	67.171	Aotus_nancymaae
ENSPTIG00000016894	RRP1B	95	75.912	ENSBTAG00000017418	RRP1B	77	75.182	Bos_taurus
ENSPTIG00000016894	RRP1B	67	42.512	ENSBTAG00000003981	RRP1	69	53.156	Bos_taurus
ENSPTIG00000016894	RRP1B	54	50.938	ENSCJAG00000043205	RRP1	65	50.938	Callithrix_jacchus
ENSPTIG00000016894	RRP1B	97	72.911	ENSCJAG00000017077	RRP1B	78	73.890	Callithrix_jacchus
ENSPTIG00000016894	RRP1B	52	49.383	ENSCAFG00000010646	RRP1	75	46.629	Canis_familiaris
ENSPTIG00000016894	RRP1B	96	83.251	ENSCAFG00000010621	RRP1B	82	83.251	Canis_familiaris
ENSPTIG00000016894	RRP1B	52	49.383	ENSCAFG00020018979	RRP1	69	50.938	Canis_lupus_dingo
ENSPTIG00000016894	RRP1B	97	77.541	ENSCAFG00020018901	RRP1B	78	81.013	Canis_lupus_dingo
ENSPTIG00000016894	RRP1B	89	76.642	ENSCHIG00000021519	RRP1B	73	75.912	Capra_hircus
ENSPTIG00000016894	RRP1B	67	42.476	ENSCHIG00000020948	RRP1	65	52.131	Capra_hircus
ENSPTIG00000016894	RRP1B	88	71.970	ENSCPOG00000002396	RRP1B	86	72.727	Cavia_porcellus
ENSPTIG00000016894	RRP1B	51	49.675	ENSCPOG00000038986	RRP1	74	47.076	Cavia_porcellus
ENSPTIG00000016894	RRP1B	63	46.753	ENSCCAG00000029828	RRP1	68	50.464	Cebus_capucinus
ENSPTIG00000016894	RRP1B	97	64.609	ENSCCAG00000029384	RRP1B	81	72.593	Cebus_capucinus
ENSPTIG00000016894	RRP1B	97	74.074	ENSCATG00000017423	RRP1B	78	75.979	Cercocebus_atys
ENSPTIG00000016894	RRP1B	89	72.857	ENSCLAG00000005622	RRP1B	75	72.857	Chinchilla_lanigera
ENSPTIG00000016894	RRP1B	61	44.474	ENSCLAG00000011639	RRP1	70	47.432	Chinchilla_lanigera
ENSPTIG00000016894	RRP1B	97	74.568	ENSCSAG00000007961	RRP1B	78	76.501	Chlorocebus_sabaeus
ENSPTIG00000016894	RRP1B	78	62.500	ENSCPBG00000010310	RRP1B	64	62.500	Chrysemys_picta_bellii
ENSPTIG00000016894	RRP1B	97	73.827	ENSCANG00000040952	RRP1B	78	75.718	Colobus_angolensis_palliatus
ENSPTIG00000016894	RRP1B	99	61.033	ENSCGRG00001010889	-	81	63.027	Cricetulus_griseus_chok1gshd
ENSPTIG00000016894	RRP1B	50	51.163	ENSCGRG00001011920	Rrp1	77	47.977	Cricetulus_griseus_chok1gshd
ENSPTIG00000016894	RRP1B	99	61.033	ENSCGRG00001023882	-	81	63.027	Cricetulus_griseus_chok1gshd
ENSPTIG00000016894	RRP1B	97	62.624	ENSCGRG00000001553	Rrp1b	81	64.752	Cricetulus_griseus_crigri
ENSPTIG00000016894	RRP1B	50	51.163	ENSCGRG00000008915	Rrp1	77	47.977	Cricetulus_griseus_crigri
ENSPTIG00000016894	RRP1B	68	52.083	ENSCSEG00000020711	-	71	52.083	Cynoglossus_semilaevis
ENSPTIG00000016894	RRP1B	54	37.963	ENSCVAG00000017568	-	81	39.091	Cyprinodon_variegatus
ENSPTIG00000016894	RRP1B	70	41.830	ENSDARG00000103337	rrp1	53	45.455	Danio_rerio
ENSPTIG00000016894	RRP1B	69	46.635	ENSDNOG00000019880	RRP1	73	50.145	Dasypus_novemcinctus
ENSPTIG00000016894	RRP1B	89	68.750	ENSDNOG00000032774	RRP1B	71	68.750	Dasypus_novemcinctus
ENSPTIG00000016894	RRP1B	85	68.276	ENSDORG00000005496	Rrp1b	73	68.276	Dipodomys_ordii
ENSPTIG00000016894	RRP1B	83	80.000	ENSETEG00000019489	RRP1B	65	80.000	Echinops_telfairi
ENSPTIG00000016894	RRP1B	99	73.206	ENSEASG00005001687	RRP1B	78	73.762	Equus_asinus_asinus
ENSPTIG00000016894	RRP1B	67	42.963	ENSEASG00005001673	RRP1	73	49.096	Equus_asinus_asinus
ENSPTIG00000016894	RRP1B	99	72.967	ENSECAG00000018018	RRP1B	78	73.515	Equus_caballus
ENSPTIG00000016894	RRP1B	73	50.806	ENSELUG00000015885	-	82	43.312	Esox_lucius
ENSPTIG00000016894	RRP1B	63	45.833	ENSFCAG00000008434	RRP1	74	49.138	Felis_catus
ENSPTIG00000016894	RRP1B	97	94.737	ENSFCAG00000010272	RRP1B	83	94.737	Felis_catus
ENSPTIG00000016894	RRP1B	71	56.522	ENSFALG00000002024	RRP1B	63	56.522	Ficedula_albicollis
ENSPTIG00000016894	RRP1B	89	72.993	ENSFDAG00000010899	RRP1B	69	72.263	Fukomys_damarensis
ENSPTIG00000016894	RRP1B	65	41.985	ENSFDAG00000013728	RRP1	75	44.638	Fukomys_damarensis
ENSPTIG00000016894	RRP1B	74	44.526	ENSFHEG00000016314	-	50	52.632	Fundulus_heteroclitus
ENSPTIG00000016894	RRP1B	72	46.364	ENSGMOG00000001953	-	63	46.364	Gadus_morhua
ENSPTIG00000016894	RRP1B	79	55.152	ENSGALG00000035696	RRP1B	61	55.152	Gallus_gallus
ENSPTIG00000016894	RRP1B	97	35.566	ENSGACG00000001438	rrp1	71	42.484	Gasterosteus_aculeatus
ENSPTIG00000016894	RRP1B	78	62.500	ENSGAGG00000000375	RRP1B	63	62.500	Gopherus_agassizii
ENSPTIG00000016894	RRP1B	97	74.074	ENSGGOG00000012069	RRP1B	78	75.718	Gorilla_gorilla
ENSPTIG00000016894	RRP1B	91	74.016	ENSHGLG00000004968	RRP1B	70	73.228	Heterocephalus_glaber_female
ENSPTIG00000016894	RRP1B	50	48.322	ENSHGLG00000017085	RRP1	70	47.059	Heterocephalus_glaber_female
ENSPTIG00000016894	RRP1B	95	61.972	ENSHGLG00100002232	RRP1B	66	73.228	Heterocephalus_glaber_male
ENSPTIG00000016894	RRP1B	73	47.107	ENSHCOG00000018388	-	60	41.781	Hippocampus_comes
ENSPTIG00000016894	RRP1B	65	44.330	ENSIPUG00000000673	-	68	39.266	Ictalurus_punctatus
ENSPTIG00000016894	RRP1B	89	73.571	ENSSTOG00000011790	RRP1B	82	71.782	Ictidomys_tridecemlineatus
ENSPTIG00000016894	RRP1B	56	49.850	ENSSTOG00000011116	RRP1	73	49.850	Ictidomys_tridecemlineatus
ENSPTIG00000016894	RRP1B	99	58.333	ENSJJAG00000021279	Rrp1b	82	59.012	Jaculus_jaculus
ENSPTIG00000016894	RRP1B	50	52.365	ENSJJAG00000018886	Rrp1	71	50.154	Jaculus_jaculus
ENSPTIG00000016894	RRP1B	70	48.819	ENSKMAG00000005539	rrp1	66	48.837	Kryptolebias_marmoratus
ENSPTIG00000016894	RRP1B	53	39.210	ENSLBEG00000021417	RRP1	87	38.827	Labrus_bergylta
ENSPTIG00000016894	RRP1B	78	49.405	ENSLACG00000017332	-	64	49.405	Latimeria_chalumnae
ENSPTIG00000016894	RRP1B	73	50.000	ENSLOCG00000004064	-	63	48.872	Lepisosteus_oculatus
ENSPTIG00000016894	RRP1B	54	49.390	ENSLAFG00000022901	RRP1	74	49.390	Loxodonta_africana
ENSPTIG00000016894	RRP1B	89	66.011	ENSLAFG00000000766	RRP1B	87	67.000	Loxodonta_africana
ENSPTIG00000016894	RRP1B	97	74.321	ENSMFAG00000039152	RRP1B	78	76.501	Macaca_fascicularis
ENSPTIG00000016894	RRP1B	99	72.554	ENSMMUG00000000104	RRP1B	81	73.827	Macaca_mulatta
ENSPTIG00000016894	RRP1B	97	74.321	ENSMNEG00000034269	RRP1B	78	76.501	Macaca_nemestrina
ENSPTIG00000016894	RRP1B	98	74.453	ENSMLEG00000040044	RRP1B	83	76.350	Mandrillus_leucophaeus
ENSPTIG00000016894	RRP1B	79	54.545	ENSMGAG00000014591	RRP1B	61	54.545	Meleagris_gallopavo
ENSPTIG00000016894	RRP1B	99	59.420	ENSMAUG00000021508	Rrp1b	72	70.629	Mesocricetus_auratus
ENSPTIG00000016894	RRP1B	50	39.274	ENSMAUG00000017653	Rrp1	74	38.218	Mesocricetus_auratus
ENSPTIG00000016894	RRP1B	93	76.762	ENSMICG00000004686	RRP1B	76	76.762	Microcebus_murinus
ENSPTIG00000016894	RRP1B	90	73.846	ENSMOCG00000001117	Rrp1b	81	58.458	Microtus_ochrogaster
ENSPTIG00000016894	RRP1B	57	33.333	ENSMMOG00000019175	rrp1	86	35.277	Mola_mola
ENSPTIG00000016894	RRP1B	97	66.076	ENSMODG00000021033	RRP1B	75	66.667	Monodelphis_domestica
ENSPTIG00000016894	RRP1B	55	40.663	ENSMALG00000010310	rrp1	85	40.606	Monopterus_albus
ENSPTIG00000016894	RRP1B	55	57.143	MGP_CAROLIEiJ_G0015508	Rrp1	60	57.143	Mus_caroli
ENSPTIG00000016894	RRP1B	91	66.443	MGP_CAROLIEiJ_G0021376	Rrp1b	73	67.114	Mus_caroli
ENSPTIG00000016894	RRP1B	91	67.114	ENSMUSG00000058392	Rrp1b	73	68.456	Mus_musculus
ENSPTIG00000016894	RRP1B	99	58.161	MGP_PahariEiJ_G0023695	Rrp1b	74	65.772	Mus_pahari
ENSPTIG00000016894	RRP1B	90	67.114	MGP_SPRETEiJ_G0022290	Rrp1b	75	68.456	Mus_spretus
ENSPTIG00000016894	RRP1B	55	45.789	ENSMPUG00000009826	RRP1	77	46.053	Mustela_putorius_furo
ENSPTIG00000016894	RRP1B	75	77.333	ENSMPUG00000009810	RRP1B	71	76.648	Mustela_putorius_furo
ENSPTIG00000016894	RRP1B	97	75.000	ENSMLUG00000007738	RRP1B	68	83.465	Myotis_lucifugus
ENSPTIG00000016894	RRP1B	63	42.424	ENSMLUG00000017788	RRP1	77	43.970	Myotis_lucifugus
ENSPTIG00000016894	RRP1B	86	71.654	ENSNGAG00000021073	Rrp1b	67	71.654	Nannospalax_galili
ENSPTIG00000016894	RRP1B	97	73.333	ENSNLEG00000001490	RRP1B	81	75.196	Nomascus_leucogenys
ENSPTIG00000016894	RRP1B	55	86.842	ENSMEUG00000003226	-	54	86.842	Notamacropus_eugenii
ENSPTIG00000016894	RRP1B	88	75.194	ENSODEG00000013177	RRP1B	72	73.282	Octodon_degus
ENSPTIG00000016894	RRP1B	77	53.846	ENSONIG00000004264	rrp1	64	52.500	Oreochromis_niloticus
ENSPTIG00000016894	RRP1B	89	61.935	ENSOANG00000006470	RRP1B	66	60.000	Ornithorhynchus_anatinus
ENSPTIG00000016894	RRP1B	51	55.882	ENSOANG00000006472	-	90	50.000	Ornithorhynchus_anatinus
ENSPTIG00000016894	RRP1B	81	66.000	ENSOCUG00000025931	RRP1B	70	66.221	Oryctolagus_cuniculus
ENSPTIG00000016894	RRP1B	69	52.688	ENSORLG00020007199	-	51	52.688	Oryzias_latipes_hni
ENSPTIG00000016894	RRP1B	78	43.202	ENSORLG00015004425	-	55	43.505	Oryzias_latipes_hsok
ENSPTIG00000016894	RRP1B	67	55.556	ENSOMEG00000016910	-	52	53.933	Oryzias_melastigma
ENSPTIG00000016894	RRP1B	96	60.062	ENSOGAG00000009872	RRP1B	97	59.750	Otolemur_garnettii
ENSPTIG00000016894	RRP1B	57	46.027	ENSOGAG00000006105	RRP1	76	47.123	Otolemur_garnettii
ENSPTIG00000016894	RRP1B	89	70.896	ENSOARG00000011314	RRP1B	77	70.896	Ovis_aries
ENSPTIG00000016894	RRP1B	98	73.494	ENSPPAG00000035319	RRP1B	82	75.654	Pan_paniscus
ENSPTIG00000016894	RRP1B	63	46.296	ENSPPRG00000010656	RRP1	72	49.096	Panthera_pardus
ENSPTIG00000016894	RRP1B	99	93.961	ENSPPRG00000010356	RRP1B	89	89.367	Panthera_pardus
ENSPTIG00000016894	RRP1B	97	74.321	ENSPTRG00000013958	RRP1B	81	73.333	Pan_troglodytes
ENSPTIG00000016894	RRP1B	97	75.315	ENSPANG00000011090	RRP1B	78	76.501	Papio_anubis
ENSPTIG00000016894	RRP1B	65	46.530	ENSPANG00000015097	RRP1	69	51.543	Papio_anubis
ENSPTIG00000016894	RRP1B	78	53.333	ENSPKIG00000003422	-	56	53.333	Paramormyrops_kingsleyae
ENSPTIG00000016894	RRP1B	79	63.235	ENSPSIG00000008152	RRP1B	61	63.235	Pelodiscus_sinensis
ENSPTIG00000016894	RRP1B	52	36.050	ENSPMGG00000007512	-	81	35.613	Periophthalmus_magnuspinnatus
ENSPTIG00000016894	RRP1B	99	59.624	ENSPEMG00000022490	Rrp1b	82	61.634	Peromyscus_maniculatus_bairdii
ENSPTIG00000016894	RRP1B	50	51.827	ENSPEMG00000018421	Rrp1	72	50.303	Peromyscus_maniculatus_bairdii
ENSPTIG00000016894	RRP1B	95	66.753	ENSPCIG00000015513	RRP1B	66	80.233	Phascolarctos_cinereus
ENSPTIG00000016894	RRP1B	89	40.426	ENSPFOG00000007424	-	59	41.096	Poecilia_formosa
ENSPTIG00000016894	RRP1B	89	41.231	ENSPMEG00000007042	-	56	41.231	Poecilia_mexicana
ENSPTIG00000016894	RRP1B	83	42.384	ENSPREG00000015673	-	50	54.839	Poecilia_reticulata
ENSPTIG00000016894	RRP1B	97	73.827	ENSPPYG00000011470	RRP1B	78	75.718	Pongo_abelii
ENSPTIG00000016894	RRP1B	78	85.263	ENSPCAG00000013723	RRP1B	65	85.263	Procavia_capensis
ENSPTIG00000016894	RRP1B	97	74.935	ENSPCOG00000017927	RRP1B	80	72.346	Propithecus_coquereli
ENSPTIG00000016894	RRP1B	53	34.375	ENSPVAG00000009925	-	53	34.375	Pteropus_vampyrus
ENSPTIG00000016894	RRP1B	97	63.210	ENSPVAG00000001436	RRP1B	80	72.603	Pteropus_vampyrus
ENSPTIG00000016894	RRP1B	99	60.095	ENSRNOG00000001194	Rrp1b	81	61.634	Rattus_norvegicus
ENSPTIG00000016894	RRP1B	97	68.766	ENSRBIG00000041689	RRP1B	78	69.713	Rhinopithecus_bieti
ENSPTIG00000016894	RRP1B	97	74.568	ENSRROG00000031499	RRP1B	78	76.501	Rhinopithecus_roxellana
ENSPTIG00000016894	RRP1B	98	69.575	ENSSBOG00000034727	RRP1B	83	69.952	Saimiri_boliviensis_boliviensis
ENSPTIG00000016894	RRP1B	54	50.625	ENSSBOG00000034689	RRP1	68	50.625	Saimiri_boliviensis_boliviensis
ENSPTIG00000016894	RRP1B	88	68.707	ENSSHAG00000017789	RRP1B	75	67.532	Sarcophilus_harrisii
ENSPTIG00000016894	RRP1B	80	50.000	ENSSFOG00015003932	-	59	50.000	Scleropages_formosus
ENSPTIG00000016894	RRP1B	74	48.062	ENSSMAG00000016847	-	77	41.791	Scophthalmus_maximus
ENSPTIG00000016894	RRP1B	74	65.385	ENSSARG00000003108	-	65	65.385	Sorex_araneus
ENSPTIG00000016894	RRP1B	71	54.286	ENSSPUG00000002834	RRP1B	60	54.286	Sphenodon_punctatus
ENSPTIG00000016894	RRP1B	80	83.333	ENSSSCG00000021698	RRP1B	76	83.333	Sus_scrofa
ENSPTIG00000016894	RRP1B	75	57.246	ENSTGUG00000005926	RRP1B	67	57.246	Taeniopygia_guttata
ENSPTIG00000016894	RRP1B	52	40.952	ENSTRUG00000017592	rrp1	88	40.952	Takifugu_rubripes
ENSPTIG00000016894	RRP1B	92	34.083	ENSTNIG00000005053	rrp1	68	47.368	Tetraodon_nigroviridis
ENSPTIG00000016894	RRP1B	96	61.969	ENSTBEG00000000422	RRP1B	100	61.460	Tupaia_belangeri
ENSPTIG00000016894	RRP1B	92	70.991	ENSTTRG00000000723	RRP1B	74	73.580	Tursiops_truncatus
ENSPTIG00000016894	RRP1B	99	69.231	ENSUAMG00000026765	RRP1B	85	79.602	Ursus_americanus
ENSPTIG00000016894	RRP1B	56	47.748	ENSUMAG00000025507	RRP1	78	46.032	Ursus_maritimus
ENSPTIG00000016894	RRP1B	98	73.242	ENSUMAG00000025510	RRP1B	90	86.826	Ursus_maritimus
ENSPTIG00000016894	RRP1B	90	85.401	ENSVVUG00000024509	RRP1B	77	83.784	Vulpes_vulpes
ENSPTIG00000016894	RRP1B	50	45.791	ENSXETG00000013683	rrp1b	93	36.493	Xenopus_tropicalis
ENSPTIG00000016894	RRP1B	68	51.020	ENSXMAG00000023123	-	54	51.020	Xiphophorus_maculatus