EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000017046 (Gene tree)
Gene ID: -
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 10229 bases
Position: chrKE722363.1:3612440-3622668
Accession: 102949195
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000019170	RRM_1	PF00076.22	9e-32	1	3
ENSPTIP00000019170	RRM_1	PF00076.22	9e-32	2	3
ENSPTIP00000019170	RRM_1	PF00076.22	9e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000023471	RBM47-201	1455	XM_015545093	ENSPTIP00000019170	484 (aa)	XP_015400579	-

Gene Model

Click here to download ENSPTIG00000017046's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017046's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000017046	RBM47	78	55.831	ENSPTIG00000021223	A1CF	64	55.335

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017046	RBM47	100	89.505	ENSG00000163694	RBM47	91	91.089	Homo_sapiens
ENSPTIG00000017046	RBM47	100	76.134	ENSAPOG00000011062	rbm47	86	76.331	Acanthochromis_polyacanthus
ENSPTIG00000017046	RBM47	100	93.267	ENSAMEG00000009672	RBM47	85	93.267	Ailuropoda_melanoleuca
ENSPTIG00000017046	RBM47	100	75.644	ENSACIG00000011531	rbm47	86	76.040	Amphilophus_citrinellus
ENSPTIG00000017046	RBM47	100	77.228	ENSAOCG00000022245	rbm47	86	77.228	Amphiprion_ocellaris
ENSPTIG00000017046	RBM47	100	77.183	ENSAPEG00000018304	rbm47	86	77.183	Amphiprion_percula
ENSPTIG00000017046	RBM47	100	77.183	ENSATEG00000018400	rbm47	83	76.389	Anabas_testudineus
ENSPTIG00000017046	RBM47	100	86.028	ENSAPLG00000013974	RBM47	85	85.828	Anas_platyrhynchos
ENSPTIG00000017046	RBM47	100	82.874	ENSACAG00000011833	RBM47	85	84.646	Anolis_carolinensis
ENSPTIG00000017046	RBM47	100	91.683	ENSANAG00000029440	RBM47	85	90.891	Aotus_nancymaae
ENSPTIG00000017046	RBM47	100	74.853	ENSACLG00000016902	rbm47	84	75.442	Astatotilapia_calliptera
ENSPTIG00000017046	RBM47	100	75.746	ENSAMXG00000021794	rbm47	83	75.944	Astyanax_mexicanus
ENSPTIG00000017046	RBM47	100	94.622	ENSBTAG00000002356	RBM47	85	94.622	Bos_taurus
ENSPTIG00000017046	RBM47	100	91.700	ENSCJAG00000019385	RBM47	85	90.909	Callithrix_jacchus
ENSPTIG00000017046	RBM47	100	91.617	ENSCAFG00000015898	RBM47	85	92.016	Canis_familiaris
ENSPTIG00000017046	RBM47	92	90.359	ENSCAFG00020010558	RBM47	75	96.853	Canis_lupus_dingo
ENSPTIG00000017046	RBM47	100	94.622	ENSCHIG00000026214	RBM47	85	94.622	Capra_hircus
ENSPTIG00000017046	RBM47	100	76.048	ENSTSYG00000033612	RBM47	90	89.908	Carlito_syrichta
ENSPTIG00000017046	RBM47	100	89.662	ENSCAPG00000008426	RBM47	85	90.060	Cavia_aperea
ENSPTIG00000017046	RBM47	100	92.843	ENSCPOG00000014100	RBM47	85	92.843	Cavia_porcellus
ENSPTIG00000017046	RBM47	100	91.502	ENSCCAG00000030129	-	85	90.711	Cebus_capucinus
ENSPTIG00000017046	RBM47	94	69.362	ENSCCAG00000024397	-	82	68.085	Cebus_capucinus
ENSPTIG00000017046	RBM47	100	90.581	ENSCATG00000042064	RBM47	85	91.984	Cercocebus_atys
ENSPTIG00000017046	RBM47	100	91.833	ENSCLAG00000001684	RBM47	85	92.231	Chinchilla_lanigera
ENSPTIG00000017046	RBM47	100	89.505	ENSCSAG00000017060	RBM47	85	91.089	Chlorocebus_sabaeus
ENSPTIG00000017046	RBM47	89	88.418	ENSCHOG00000011731	RBM47	73	87.006	Choloepus_hoffmanni
ENSPTIG00000017046	RBM47	100	87.771	ENSCPBG00000013831	RBM47	85	87.574	Chrysemys_picta_bellii
ENSPTIG00000017046	RBM47	100	91.182	ENSCANG00000019997	RBM47	85	91.784	Colobus_angolensis_palliatus
ENSPTIG00000017046	RBM47	100	89.881	ENSCGRG00001000623	-	85	89.683	Cricetulus_griseus_chok1gshd
ENSPTIG00000017046	RBM47	100	69.753	ENSCGRG00001020102	-	84	71.546	Cricetulus_griseus_chok1gshd
ENSPTIG00000017046	RBM47	100	88.889	ENSCGRG00000007762	-	85	88.690	Cricetulus_griseus_crigri
ENSPTIG00000017046	RBM47	100	69.753	ENSCGRG00000014760	-	84	71.546	Cricetulus_griseus_crigri
ENSPTIG00000017046	RBM47	100	74.308	ENSCSEG00000004545	rbm47	86	74.506	Cynoglossus_semilaevis
ENSPTIG00000017046	RBM47	100	75.149	ENSCVAG00000020144	rbm47	86	74.553	Cyprinodon_variegatus
ENSPTIG00000017046	RBM47	100	77.246	ENSDARG00000061985	rbm47	83	77.046	Danio_rerio
ENSPTIG00000017046	RBM47	100	91.952	ENSDNOG00000046854	RBM47	85	92.958	Dasypus_novemcinctus
ENSPTIG00000017046	RBM47	100	90.748	ENSDORG00000010144	Rbm47	85	90.748	Dipodomys_ordii
ENSPTIG00000017046	RBM47	100	91.519	ENSETEG00000009194	RBM47	85	91.519	Echinops_telfairi
ENSPTIG00000017046	RBM47	99	58.383	ENSEBUG00000011912	rbm47	85	57.905	Eptatretus_burgeri
ENSPTIG00000017046	RBM47	100	94.422	ENSEASG00005008443	RBM47	85	94.422	Equus_asinus_asinus
ENSPTIG00000017046	RBM47	100	94.422	ENSECAG00000004400	RBM47	85	94.422	Equus_caballus
ENSPTIG00000017046	RBM47	70	97.872	ENSEEUG00000001194	RBM47	60	97.872	Erinaceus_europaeus
ENSPTIG00000017046	RBM47	100	74.405	ENSELUG00000006148	rbm47	83	75.397	Esox_lucius
ENSPTIG00000017046	RBM47	100	95.800	ENSFCAG00000012399	RBM47	85	95.800	Felis_catus
ENSPTIG00000017046	RBM47	100	87.747	ENSFALG00000002861	RBM47	85	87.945	Ficedula_albicollis
ENSPTIG00000017046	RBM47	100	92.415	ENSFDAG00000016326	RBM47	85	92.216	Fukomys_damarensis
ENSPTIG00000017046	RBM47	100	76.447	ENSFHEG00000007938	rbm47	86	75.649	Fundulus_heteroclitus
ENSPTIG00000017046	RBM47	100	74.162	ENSGMOG00000014802	rbm47	82	73.767	Gadus_morhua
ENSPTIG00000017046	RBM47	59	94.077	ENSGALG00000014267	RBM47	76	93.750	Gallus_gallus
ENSPTIG00000017046	RBM47	59	86.014	ENSGAFG00000020571	rbm47	76	85.714	Gambusia_affinis
ENSPTIG00000017046	RBM47	100	74.155	ENSGACG00000016223	rbm47	83	75.348	Gasterosteus_aculeatus
ENSPTIG00000017046	RBM47	100	87.968	ENSGAGG00000020051	RBM47	85	87.771	Gopherus_agassizii
ENSPTIG00000017046	RBM47	100	90.581	ENSGGOG00000001367	RBM47	85	91.984	Gorilla_gorilla
ENSPTIG00000017046	RBM47	100	74.560	ENSHBUG00000003520	rbm47	84	75.147	Haplochromis_burtoni
ENSPTIG00000017046	RBM47	81	78.689	ENSHGLG00000016914	RBM47	80	57.613	Heterocephalus_glaber_female
ENSPTIG00000017046	RBM47	100	81.526	ENSHGLG00100003071	-	84	81.325	Heterocephalus_glaber_male
ENSPTIG00000017046	RBM47	100	90.800	ENSHGLG00100014028	-	85	91.000	Heterocephalus_glaber_male
ENSPTIG00000017046	RBM47	99	76.048	ENSHCOG00000002074	rbm47	85	75.649	Hippocampus_comes
ENSPTIG00000017046	RBM47	100	76.447	ENSIPUG00000004743	rbm47	86	76.248	Ictalurus_punctatus
ENSPTIG00000017046	RBM47	100	92.688	ENSSTOG00000004727	RBM47	85	92.688	Ictidomys_tridecemlineatus
ENSPTIG00000017046	RBM47	100	92.843	ENSJJAG00000013823	Rbm47	85	92.843	Jaculus_jaculus
ENSPTIG00000017046	RBM47	100	76.877	ENSKMAG00000000084	rbm47	85	76.436	Kryptolebias_marmoratus
ENSPTIG00000017046	RBM47	100	74.753	ENSLBEG00000008436	rbm47	85	74.162	Labrus_bergylta
ENSPTIG00000017046	RBM47	100	83.730	ENSLACG00000007196	RBM47	85	83.135	Latimeria_chalumnae
ENSPTIG00000017046	RBM47	100	80.600	ENSLOCG00000012966	rbm47	81	79.400	Lepisosteus_oculatus
ENSPTIG00000017046	RBM47	100	91.881	ENSLAFG00000011998	RBM47	85	91.485	Loxodonta_africana
ENSPTIG00000017046	RBM47	100	90.581	ENSMFAG00000037967	RBM47	85	91.984	Macaca_fascicularis
ENSPTIG00000017046	RBM47	100	89.505	ENSMMUG00000012036	RBM47	85	91.089	Macaca_mulatta
ENSPTIG00000017046	RBM47	100	90.782	ENSMNEG00000040774	RBM47	85	92.184	Macaca_nemestrina
ENSPTIG00000017046	RBM47	100	98.673	ENSMLEG00000041432	RBM47	86	98.673	Mandrillus_leucophaeus
ENSPTIG00000017046	RBM47	100	76.143	ENSMAMG00000019143	rbm47	83	75.746	Mastacembelus_armatus
ENSPTIG00000017046	RBM47	100	74.853	ENSMZEG00005023659	rbm47	84	75.442	Maylandia_zebra
ENSPTIG00000017046	RBM47	100	85.069	ENSMGAG00000012226	RBM47	85	86.640	Meleagris_gallopavo
ENSPTIG00000017046	RBM47	100	90.675	ENSMAUG00000006493	Rbm47	85	90.675	Mesocricetus_auratus
ENSPTIG00000017046	RBM47	100	90.101	ENSMICG00000026417	RBM47	85	90.505	Microcebus_murinus
ENSPTIG00000017046	RBM47	100	91.252	ENSMOCG00000021170	Rbm47	85	91.252	Microtus_ochrogaster
ENSPTIG00000017046	RBM47	100	77.381	ENSMMOG00000007260	rbm47	83	75.794	Mola_mola
ENSPTIG00000017046	RBM47	50	82.231	ENSMODG00000015426	-	73	83.966	Monodelphis_domestica
ENSPTIG00000017046	RBM47	100	88.668	ENSMODG00000007003	RBM47	85	88.867	Monodelphis_domestica
ENSPTIG00000017046	RBM47	100	79.760	ENSMODG00000020561	-	85	78.758	Monodelphis_domestica
ENSPTIG00000017046	RBM47	100	77.092	ENSMALG00000005167	rbm47	86	76.494	Monopterus_albus
ENSPTIG00000017046	RBM47	100	91.235	MGP_CAROLIEiJ_G0027258	Rbm47	85	91.235	Mus_caroli
ENSPTIG00000017046	RBM47	100	91.633	ENSMUSG00000070780	Rbm47	85	91.633	Mus_musculus
ENSPTIG00000017046	RBM47	100	91.434	MGP_PahariEiJ_G0017040	Rbm47	85	91.434	Mus_pahari
ENSPTIG00000017046	RBM47	100	92.184	MGP_SPRETEiJ_G0028253	Rbm47	85	92.184	Mus_spretus
ENSPTIG00000017046	RBM47	100	94.024	ENSMPUG00000006177	RBM47	80	94.024	Mustela_putorius_furo
ENSPTIG00000017046	RBM47	100	91.218	ENSMLUG00000000889	RBM47	85	91.617	Myotis_lucifugus
ENSPTIG00000017046	RBM47	100	90.675	ENSNGAG00000003325	Rbm47	85	90.675	Nannospalax_galili
ENSPTIG00000017046	RBM47	100	74.902	ENSNBRG00000015092	rbm47	84	75.294	Neolamprologus_brichardi
ENSPTIG00000017046	RBM47	100	90.381	ENSNLEG00000017151	RBM47	85	91.784	Nomascus_leucogenys
ENSPTIG00000017046	RBM47	73	86.197	ENSMEUG00000009516	-	83	86.197	Notamacropus_eugenii
ENSPTIG00000017046	RBM47	76	96.680	ENSOPRG00000016507	-	65	96.680	Ochotona_princeps
ENSPTIG00000017046	RBM47	100	93.227	ENSODEG00000004873	RBM47	85	93.227	Octodon_degus
ENSPTIG00000017046	RBM47	100	75.692	ENSONIG00000009061	rbm47	83	75.296	Oreochromis_niloticus
ENSPTIG00000017046	RBM47	100	87.525	ENSOANG00000008978	RBM47	84	88.129	Ornithorhynchus_anatinus
ENSPTIG00000017046	RBM47	100	92.415	ENSOCUG00000012034	RBM47	85	92.615	Oryctolagus_cuniculus
ENSPTIG00000017046	RBM47	100	75.944	ENSORLG00000005847	rbm47	81	85.315	Oryzias_latipes
ENSPTIG00000017046	RBM47	100	76.143	ENSORLG00020005154	rbm47	81	85.315	Oryzias_latipes_hni
ENSPTIG00000017046	RBM47	100	76.190	ENSORLG00015000066	rbm47	81	85.315	Oryzias_latipes_hsok
ENSPTIG00000017046	RBM47	100	77.137	ENSOMEG00000010730	rbm47	85	76.938	Oryzias_melastigma
ENSPTIG00000017046	RBM47	100	91.036	ENSOGAG00000029367	-	85	93.028	Otolemur_garnettii
ENSPTIG00000017046	RBM47	100	85.141	ENSOGAG00000025193	-	85	85.341	Otolemur_garnettii
ENSPTIG00000017046	RBM47	89	94.196	ENSOARG00000012711	RBM47	82	94.196	Ovis_aries
ENSPTIG00000017046	RBM47	100	90.381	ENSPPAG00000029763	RBM47	85	91.784	Pan_paniscus
ENSPTIG00000017046	RBM47	100	92.000	ENSPPRG00000012873	RBM47	84	92.200	Panthera_pardus
ENSPTIG00000017046	RBM47	100	90.581	ENSPTRG00000016006	RBM47	85	91.984	Pan_troglodytes
ENSPTIG00000017046	RBM47	100	90.581	ENSPANG00000005980	RBM47	85	91.984	Papio_anubis
ENSPTIG00000017046	RBM47	100	71.912	ENSPKIG00000013431	RBM47	85	71.713	Paramormyrops_kingsleyae
ENSPTIG00000017046	RBM47	100	75.400	ENSPKIG00000005037	rbm47	84	74.600	Paramormyrops_kingsleyae
ENSPTIG00000017046	RBM47	88	88.838	ENSPSIG00000017516	RBM47	81	88.838	Pelodiscus_sinensis
ENSPTIG00000017046	RBM47	100	75.149	ENSPMGG00000018540	rbm47	85	75.547	Periophthalmus_magnuspinnatus
ENSPTIG00000017046	RBM47	100	91.270	ENSPEMG00000011088	Rbm47	85	91.468	Peromyscus_maniculatus_bairdii
ENSPTIG00000017046	RBM47	100	75.835	ENSPFOG00000007997	rbm47	83	75.442	Poecilia_formosa
ENSPTIG00000017046	RBM47	100	75.984	ENSPLAG00000002072	rbm47	83	75.591	Poecilia_latipinna
ENSPTIG00000017046	RBM47	100	76.228	ENSPMEG00000017492	rbm47	86	75.639	Poecilia_mexicana
ENSPTIG00000017046	RBM47	100	75.984	ENSPREG00000008456	rbm47	83	75.591	Poecilia_reticulata
ENSPTIG00000017046	RBM47	99	79.010	ENSPPYG00000014688	RBM47	86	80.396	Pongo_abelii
ENSPTIG00000017046	RBM47	80	96.785	ENSPCAG00000011879	RBM47	66	96.785	Procavia_capensis
ENSPTIG00000017046	RBM47	100	92.169	ENSPCOG00000023451	RBM47	85	92.369	Propithecus_coquereli
ENSPTIG00000017046	RBM47	100	92.673	ENSPVAG00000003812	RBM47	85	92.673	Pteropus_vampyrus
ENSPTIG00000017046	RBM47	100	74.414	ENSPNYG00000022868	rbm47	84	75.000	Pundamilia_nyererei
ENSPTIG00000017046	RBM47	100	76.389	ENSPNAG00000007940	rbm47	83	75.794	Pygocentrus_nattereri
ENSPTIG00000017046	RBM47	100	91.434	ENSRNOG00000002408	Rbm47	85	91.434	Rattus_norvegicus
ENSPTIG00000017046	RBM47	100	91.182	ENSRBIG00000039601	RBM47	85	91.784	Rhinopithecus_bieti
ENSPTIG00000017046	RBM47	100	91.182	ENSRROG00000044696	RBM47	85	91.784	Rhinopithecus_roxellana
ENSPTIG00000017046	RBM47	100	92.213	ENSSBOG00000028475	RBM47	82	96.203	Saimiri_boliviensis_boliviensis
ENSPTIG00000017046	RBM47	100	89.222	ENSSHAG00000017576	RBM47	85	89.421	Sarcophilus_harrisii
ENSPTIG00000017046	RBM47	100	74.949	ENSSFOG00015012445	rbm47	83	74.089	Scleropages_formosus
ENSPTIG00000017046	RBM47	100	72.962	ENSSFOG00015024101	RBM47	85	72.763	Scleropages_formosus
ENSPTIG00000017046	RBM47	100	76.096	ENSSMAG00000009744	rbm47	83	75.498	Scophthalmus_maximus
ENSPTIG00000017046	RBM47	100	77.381	ENSSDUG00000022684	rbm47	85	76.786	Seriola_dumerili
ENSPTIG00000017046	RBM47	100	77.183	ENSSLDG00000003109	rbm47	86	76.587	Seriola_lalandi_dorsalis
ENSPTIG00000017046	RBM47	84	95.822	ENSSARG00000001735	RBM47	69	95.822	Sorex_araneus
ENSPTIG00000017046	RBM47	100	86.573	ENSSPUG00000007515	RBM47	85	85.571	Sphenodon_punctatus
ENSPTIG00000017046	RBM47	100	77.381	ENSSPAG00000001257	rbm47	86	76.786	Stegastes_partitus
ENSPTIG00000017046	RBM47	100	94.223	ENSSSCG00000008796	RBM47	85	94.223	Sus_scrofa
ENSPTIG00000017046	RBM47	100	85.743	ENSTGUG00000008705	RBM47	85	87.723	Taeniopygia_guttata
ENSPTIG00000017046	RBM47	100	75.149	ENSTRUG00000014050	rbm47	86	73.757	Takifugu_rubripes
ENSPTIG00000017046	RBM47	100	76.143	ENSTNIG00000006127	rbm47	83	74.950	Tetraodon_nigroviridis
ENSPTIG00000017046	RBM47	75	90.210	ENSTBEG00000001607	RBM47	61	89.474	Tupaia_belangeri
ENSPTIG00000017046	RBM47	100	94.578	ENSTTRG00000002839	RBM47	85	94.578	Tursiops_truncatus
ENSPTIG00000017046	RBM47	100	94.012	ENSUAMG00000021346	RBM47	85	94.012	Ursus_americanus
ENSPTIG00000017046	RBM47	100	92.800	ENSVVUG00000014774	RBM47	85	93.200	Vulpes_vulpes
ENSPTIG00000017046	RBM47	100	82.834	ENSXETG00000012802	rbm47	85	83.433	Xenopus_tropicalis
ENSPTIG00000017046	RBM47	86	85.664	ENSXCOG00000000780	rbm47	84	85.664	Xiphophorus_couchianus
ENSPTIG00000017046	RBM47	100	74.111	ENSXMAG00000009874	rbm47	81	85.664	Xiphophorus_maculatus