EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000017380 (Gene tree)
Gene ID: 102958360
Gene Symbol: PYM1
Alias: -
Full Name: PYM homolog 1%2C exon junction complex associated factor
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 19095 bases
Position: chrKE721754.1:3535697-3554791
Accession: 102958360
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000019648	Mago-bind	PF09282.10	7.2e-14	1	1
ENSPTIP00000019654	Mago-bind	PF09282.10	1.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000023976	PYM1-202	612	-	ENSPTIP00000019654	203 (aa)	-	-
ENSPTIT00000023970	PYM1-201	1606	XM_007081469	ENSPTIP00000019648	203 (aa)	XP_007081531	UPI00042BEB2C

Gene Model

Click here to download ENSPTIG00000017380's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017380's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017380	PYM1	94	94.764	ENSG00000170473	PYM1	94	94.764	Homo_sapiens
ENSPTIG00000017380	PYM1	99	58.879	ENSAPOG00000023045	pym1	94	59.024	Acanthochromis_polyacanthus
ENSPTIG00000017380	PYM1	93	89.894	ENSAMEG00000003091	PYM1	93	89.894	Ailuropoda_melanoleuca
ENSPTIG00000017380	PYM1	99	60.648	ENSACIG00000012769	pym1	94	60.096	Amphilophus_citrinellus
ENSPTIG00000017380	PYM1	99	58.768	ENSAOCG00000021358	pym1	94	60.294	Amphiprion_ocellaris
ENSPTIG00000017380	PYM1	99	58.768	ENSAPEG00000022679	pym1	94	60.294	Amphiprion_percula
ENSPTIG00000017380	PYM1	99	58.411	ENSATEG00000024022	pym1	94	60.294	Anabas_testudineus
ENSPTIG00000017380	PYM1	94	69.458	ENSACAG00000005714	PYM1	94	69.458	Anolis_carolinensis
ENSPTIG00000017380	PYM1	94	93.717	ENSANAG00000036967	PYM1	94	93.717	Aotus_nancymaae
ENSPTIG00000017380	PYM1	100	56.881	ENSAMXG00000007650	pym1	94	59.709	Astyanax_mexicanus
ENSPTIG00000017380	PYM1	94	93.194	ENSBTAG00000031146	PYM1	94	93.194	Bos_taurus
ENSPTIG00000017380	PYM1	94	93.194	ENSCJAG00000041077	PYM1	94	93.194	Callithrix_jacchus
ENSPTIG00000017380	PYM1	94	95.288	ENSCAFG00000000076	PYM1	94	95.288	Canis_familiaris
ENSPTIG00000017380	PYM1	94	95.288	ENSCAFG00020026099	PYM1	94	95.288	Canis_lupus_dingo
ENSPTIG00000017380	PYM1	94	91.099	ENSCHIG00000026207	PYM1	94	91.099	Capra_hircus
ENSPTIG00000017380	PYM1	94	92.147	ENSTSYG00000000787	PYM1	94	92.147	Carlito_syrichta
ENSPTIG00000017380	PYM1	88	89.944	ENSCAPG00000010374	PYM1	94	89.944	Cavia_aperea
ENSPTIG00000017380	PYM1	94	90.576	ENSCPOG00000031546	PYM1	94	90.576	Cavia_porcellus
ENSPTIG00000017380	PYM1	94	94.241	ENSCCAG00000026187	PYM1	94	94.241	Cebus_capucinus
ENSPTIG00000017380	PYM1	94	94.241	ENSCATG00000018801	PYM1	94	94.241	Cercocebus_atys
ENSPTIG00000017380	PYM1	94	87.958	ENSCLAG00000007964	PYM1	94	87.958	Chinchilla_lanigera
ENSPTIG00000017380	PYM1	89	93.889	ENSCSAG00000005291	PYM1	93	93.370	Chlorocebus_sabaeus
ENSPTIG00000017380	PYM1	98	40.476	ENSCING00000006448	-	93	40.704	Ciona_intestinalis
ENSPTIG00000017380	PYM1	98	38.942	ENSCSAVG00000009805	-	89	39.086	Ciona_savignyi
ENSPTIG00000017380	PYM1	94	94.241	ENSCANG00000020338	-	94	94.241	Colobus_angolensis_palliatus
ENSPTIG00000017380	PYM1	98	85.859	ENSCANG00000019757	-	86	90.526	Colobus_angolensis_palliatus
ENSPTIG00000017380	PYM1	94	87.958	ENSCGRG00001018051	-	94	87.958	Cricetulus_griseus_chok1gshd
ENSPTIG00000017380	PYM1	94	73.298	ENSCGRG00001004231	-	93	73.298	Cricetulus_griseus_chok1gshd
ENSPTIG00000017380	PYM1	94	87.958	ENSCGRG00000012495	-	94	87.958	Cricetulus_griseus_crigri
ENSPTIG00000017380	PYM1	94	73.298	ENSCGRG00000018933	-	93	73.298	Cricetulus_griseus_crigri
ENSPTIG00000017380	PYM1	94	56.190	ENSCSEG00000021531	pym1	94	59.048	Cynoglossus_semilaevis
ENSPTIG00000017380	PYM1	94	62.000	ENSCVAG00000017360	pym1	81	59.896	Cyprinodon_variegatus
ENSPTIG00000017380	PYM1	99	54.167	ENSDARG00000046024	pym1	94	55.072	Danio_rerio
ENSPTIG00000017380	PYM1	94	90.576	ENSDNOG00000048414	PYM1	86	90.576	Dasypus_novemcinctus
ENSPTIG00000017380	PYM1	94	91.099	ENSDORG00000029448	Pym1	94	91.099	Dipodomys_ordii
ENSPTIG00000017380	PYM1	93	35.437	FBgn0034918	Pym	88	35.897	Drosophila_melanogaster
ENSPTIG00000017380	PYM1	89	88.333	ENSETEG00000004461	-	94	88.333	Echinops_telfairi
ENSPTIG00000017380	PYM1	93	89.362	ENSEASG00005002271	PYM1	85	89.362	Equus_asinus_asinus
ENSPTIG00000017380	PYM1	94	93.717	ENSECAG00000011870	PYM1	94	93.717	Equus_caballus
ENSPTIG00000017380	PYM1	96	57.789	ENSELUG00000024250	pym1	94	60.204	Esox_lucius
ENSPTIG00000017380	PYM1	100	98.030	ENSFCAG00000013967	PYM1	100	98.030	Felis_catus
ENSPTIG00000017380	PYM1	94	91.623	ENSFDAG00000006314	PYM1	94	91.623	Fukomys_damarensis
ENSPTIG00000017380	PYM1	94	59.406	ENSFHEG00000005884	pym1	94	58.416	Fundulus_heteroclitus
ENSPTIG00000017380	PYM1	94	57.789	ENSGMOG00000007239	pym1	93	58.462	Gadus_morhua
ENSPTIG00000017380	PYM1	94	70.769	ENSGALG00000046169	PYM1	94	69.608	Gallus_gallus
ENSPTIG00000017380	PYM1	99	61.033	ENSGAFG00000003280	pym1	93	61.194	Gambusia_affinis
ENSPTIG00000017380	PYM1	100	55.825	ENSGACG00000010703	pym1	94	56.410	Gasterosteus_aculeatus
ENSPTIG00000017380	PYM1	92	62.687	ENSGAGG00000001973	PYM1	88	62.687	Gopherus_agassizii
ENSPTIG00000017380	PYM1	94	94.241	ENSGGOG00000043246	PYM1	94	94.241	Gorilla_gorilla
ENSPTIG00000017380	PYM1	94	58.824	ENSHBUG00000012719	pym1	94	61.165	Haplochromis_burtoni
ENSPTIG00000017380	PYM1	94	92.670	ENSHGLG00000017155	PYM1	94	92.670	Heterocephalus_glaber_female
ENSPTIG00000017380	PYM1	94	92.670	ENSHGLG00100015341	PYM1	94	92.670	Heterocephalus_glaber_male
ENSPTIG00000017380	PYM1	99	57.009	ENSHCOG00000007987	pym1	80	59.091	Hippocampus_comes
ENSPTIG00000017380	PYM1	100	58.065	ENSIPUG00000005975	wibga	94	58.049	Ictalurus_punctatus
ENSPTIG00000017380	PYM1	94	92.670	ENSSTOG00000014206	PYM1	94	92.670	Ictidomys_tridecemlineatus
ENSPTIG00000017380	PYM1	94	89.005	ENSJJAG00000013338	Pym1	94	89.005	Jaculus_jaculus
ENSPTIG00000017380	PYM1	99	57.658	ENSKMAG00000006351	pym1	95	56.744	Kryptolebias_marmoratus
ENSPTIG00000017380	PYM1	99	59.615	ENSLBEG00000015707	pym1	93	59.694	Labrus_bergylta
ENSPTIG00000017380	PYM1	91	59.694	ENSLACG00000014398	PYM1	91	59.694	Latimeria_chalumnae
ENSPTIG00000017380	PYM1	94	92.147	ENSLAFG00000002369	PYM1	94	92.147	Loxodonta_africana
ENSPTIG00000017380	PYM1	94	94.241	ENSMFAG00000003048	PYM1	94	94.241	Macaca_fascicularis
ENSPTIG00000017380	PYM1	94	94.241	ENSMMUG00000011002	PYM1	94	94.241	Macaca_mulatta
ENSPTIG00000017380	PYM1	94	94.241	ENSMNEG00000034677	PYM1	94	94.241	Macaca_nemestrina
ENSPTIG00000017380	PYM1	94	94.241	ENSMLEG00000007971	PYM1	94	94.241	Mandrillus_leucophaeus
ENSPTIG00000017380	PYM1	99	56.364	ENSMAMG00000001588	pym1	94	59.070	Mastacembelus_armatus
ENSPTIG00000017380	PYM1	94	58.333	ENSMZEG00005026458	pym1	94	60.680	Maylandia_zebra
ENSPTIG00000017380	PYM1	94	88.482	ENSMAUG00000007318	Pym1	94	88.482	Mesocricetus_auratus
ENSPTIG00000017380	PYM1	94	92.670	ENSMICG00000032962	PYM1	94	92.670	Microcebus_murinus
ENSPTIG00000017380	PYM1	94	86.387	ENSMOCG00000010208	Pym1	94	86.387	Microtus_ochrogaster
ENSPTIG00000017380	PYM1	99	58.252	ENSMMOG00000009301	pym1	92	60.309	Mola_mola
ENSPTIG00000017380	PYM1	99	58.095	ENSMALG00000013496	pym1	94	58.824	Monopterus_albus
ENSPTIG00000017380	PYM1	94	87.958	MGP_CAROLIEiJ_G0015953	Pym1	94	87.958	Mus_caroli
ENSPTIG00000017380	PYM1	94	89.005	ENSMUSG00000064030	Pym1	94	89.005	Mus_musculus
ENSPTIG00000017380	PYM1	94	86.911	MGP_PahariEiJ_G0031131	Pym1	94	86.911	Mus_pahari
ENSPTIG00000017380	PYM1	94	89.005	MGP_SPRETEiJ_G0016778	Pym1	94	89.005	Mus_spretus
ENSPTIG00000017380	PYM1	100	96.552	ENSMPUG00000000931	PYM1	100	96.552	Mustela_putorius_furo
ENSPTIG00000017380	PYM1	94	85.340	ENSMLUG00000003586	PYM1	90	89.503	Myotis_lucifugus
ENSPTIG00000017380	PYM1	89	89.444	ENSNGAG00000019207	Pym1	88	88.950	Nannospalax_galili
ENSPTIG00000017380	PYM1	99	59.624	ENSNBRG00000006951	pym1	94	61.165	Neolamprologus_brichardi
ENSPTIG00000017380	PYM1	94	94.764	ENSNLEG00000017588	PYM1	94	94.764	Nomascus_leucogenys
ENSPTIG00000017380	PYM1	88	78.652	ENSMEUG00000001017	PYM1	93	78.531	Notamacropus_eugenii
ENSPTIG00000017380	PYM1	90	89.071	ENSOPRG00000007797	PYM1	94	86.458	Ochotona_princeps
ENSPTIG00000017380	PYM1	94	91.623	ENSODEG00000004289	PYM1	94	91.623	Octodon_degus
ENSPTIG00000017380	PYM1	94	57.971	ENSONIG00000016740	pym1	94	59.420	Oreochromis_niloticus
ENSPTIG00000017380	PYM1	89	90.556	ENSOCUG00000025969	PYM1	81	90.556	Oryctolagus_cuniculus
ENSPTIG00000017380	PYM1	99	61.244	ENSORLG00000030592	pym1	94	60.804	Oryzias_latipes
ENSPTIG00000017380	PYM1	99	60.664	ENSORLG00020011264	pym1	94	60.697	Oryzias_latipes_hni
ENSPTIG00000017380	PYM1	99	62.019	ENSORLG00015005287	pym1	94	61.616	Oryzias_latipes_hsok
ENSPTIG00000017380	PYM1	99	62.621	ENSOMEG00000022250	pym1	94	62.121	Oryzias_melastigma
ENSPTIG00000017380	PYM1	89	92.778	ENSOGAG00000007038	PYM1	88	92.778	Otolemur_garnettii
ENSPTIG00000017380	PYM1	94	91.623	ENSOARG00000010856	PYM1	94	91.623	Ovis_aries
ENSPTIG00000017380	PYM1	94	94.764	ENSPPAG00000043630	PYM1	94	94.764	Pan_paniscus
ENSPTIG00000017380	PYM1	100	98.522	ENSPPRG00000013243	PYM1	100	98.522	Panthera_pardus
ENSPTIG00000017380	PYM1	94	94.764	ENSPTRG00000005067	PYM1	94	94.764	Pan_troglodytes
ENSPTIG00000017380	PYM1	94	93.717	ENSPANG00000009562	PYM1	94	93.717	Papio_anubis
ENSPTIG00000017380	PYM1	100	61.321	ENSPKIG00000006301	pym1	94	60.500	Paramormyrops_kingsleyae
ENSPTIG00000017380	PYM1	93	65.990	ENSPSIG00000003043	PYM1	93	65.990	Pelodiscus_sinensis
ENSPTIG00000017380	PYM1	100	62.679	ENSPMGG00000023161	pym1	94	62.944	Periophthalmus_magnuspinnatus
ENSPTIG00000017380	PYM1	94	87.958	ENSPEMG00000009372	Pym1	94	87.958	Peromyscus_maniculatus_bairdii
ENSPTIG00000017380	PYM1	92	79.032	ENSPCIG00000024658	PYM1	91	78.723	Phascolarctos_cinereus
ENSPTIG00000017380	PYM1	99	62.085	ENSPFOG00000008193	pym1	93	62.312	Poecilia_formosa
ENSPTIG00000017380	PYM1	99	61.611	ENSPLAG00000009228	pym1	93	61.809	Poecilia_latipinna
ENSPTIG00000017380	PYM1	99	61.611	ENSPMEG00000001505	pym1	93	61.809	Poecilia_mexicana
ENSPTIG00000017380	PYM1	94	90.625	ENSPPYG00000004635	PYM1	93	92.265	Pongo_abelii
ENSPTIG00000017380	PYM1	94	94.241	ENSPCOG00000019706	PYM1	94	94.241	Propithecus_coquereli
ENSPTIG00000017380	PYM1	94	93.750	ENSPVAG00000011437	PYM1	94	93.750	Pteropus_vampyrus
ENSPTIG00000017380	PYM1	94	60.099	ENSPNYG00000012871	pym1	94	60.976	Pundamilia_nyererei
ENSPTIG00000017380	PYM1	99	58.716	ENSPNAG00000018833	pym1	94	59.330	Pygocentrus_nattereri
ENSPTIG00000017380	PYM1	92	65.775	ENSRNOG00000049415	AABR07055413.1	91	60.638	Rattus_norvegicus
ENSPTIG00000017380	PYM1	91	85.870	ENSRNOG00000058130	Pym1	94	82.812	Rattus_norvegicus
ENSPTIG00000017380	PYM1	94	89.529	ENSRBIG00000033362	PYM1	94	89.529	Rhinopithecus_bieti
ENSPTIG00000017380	PYM1	94	94.241	ENSRROG00000043620	PYM1	94	94.241	Rhinopithecus_roxellana
ENSPTIG00000017380	PYM1	94	94.241	ENSSBOG00000029393	PYM1	94	94.241	Saimiri_boliviensis_boliviensis
ENSPTIG00000017380	PYM1	93	80.423	ENSSHAG00000008280	PYM1	93	80.423	Sarcophilus_harrisii
ENSPTIG00000017380	PYM1	93	62.887	ENSSFOG00015021475	pym1	94	62.437	Scleropages_formosus
ENSPTIG00000017380	PYM1	99	57.820	ENSSMAG00000020912	pym1	94	59.406	Scophthalmus_maximus
ENSPTIG00000017380	PYM1	99	55.814	ENSSDUG00000001807	pym1	94	59.524	Seriola_dumerili
ENSPTIG00000017380	PYM1	99	60.000	ENSSLDG00000013730	pym1	94	63.000	Seriola_lalandi_dorsalis
ENSPTIG00000017380	PYM1	89	89.444	ENSSARG00000009569	PYM1	94	89.444	Sorex_araneus
ENSPTIG00000017380	PYM1	92	64.467	ENSSPUG00000015059	PYM1	93	64.467	Sphenodon_punctatus
ENSPTIG00000017380	PYM1	99	58.411	ENSSPAG00000020100	pym1	94	59.135	Stegastes_partitus
ENSPTIG00000017380	PYM1	94	91.623	ENSSSCG00000040825	PYM1	94	91.623	Sus_scrofa
ENSPTIG00000017380	PYM1	99	58.173	ENSTRUG00000021367	pym1	93	59.694	Takifugu_rubripes
ENSPTIG00000017380	PYM1	99	55.000	ENSTNIG00000012534	pym1	92	58.549	Tetraodon_nigroviridis
ENSPTIG00000017380	PYM1	89	85.556	ENSTBEG00000004208	PYM1	94	85.556	Tupaia_belangeri
ENSPTIG00000017380	PYM1	94	92.708	ENSTTRG00000014971	PYM1	94	92.708	Tursiops_truncatus
ENSPTIG00000017380	PYM1	94	93.717	ENSUAMG00000014521	PYM1	94	93.717	Ursus_americanus
ENSPTIG00000017380	PYM1	94	91.146	ENSUMAG00000016241	PYM1	84	90.811	Ursus_maritimus
ENSPTIG00000017380	PYM1	94	95.288	ENSVVUG00000022749	PYM1	94	95.288	Vulpes_vulpes
ENSPTIG00000017380	PYM1	94	62.564	ENSXETG00000021850	pym1	94	63.452	Xenopus_tropicalis
ENSPTIG00000017380	PYM1	99	61.137	ENSXMAG00000011649	pym1	93	61.307	Xiphophorus_maculatus