EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000017424 (Gene tree)
Gene ID: 102965973
Gene Symbol: EDC3
Alias: -
Full Name: enhancer of mRNA decapping 3
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 57971 bases
Position: chrKE721800.1:16222795-16280765
Accession: 102965973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000019710	FDF	PF09532.10	8.3e-19	1	1
ENSPTIP00000019710	LSM14	PF12701.7	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024035	EDC3-201	1842	XM_007084592	ENSPTIP00000019710	508 (aa)	XP_007084654	UPI000904F3D8

Gene Model

Click here to download ENSPTIG00000017424's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017424's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017424	EDC3	100	96.457	ENSG00000179151	EDC3	100	98.160	Homo_sapiens
ENSPTIG00000017424	EDC3	100	55.728	ENSAPOG00000008655	EDC3	100	55.728	Acanthochromis_polyacanthus
ENSPTIG00000017424	EDC3	100	69.608	ENSAPOG00000010791	edc3	100	69.608	Acanthochromis_polyacanthus
ENSPTIG00000017424	EDC3	100	99.016	ENSAMEG00000008963	EDC3	100	99.016	Ailuropoda_melanoleuca
ENSPTIG00000017424	EDC3	100	68.173	ENSACIG00000017751	edc3	100	68.173	Amphilophus_citrinellus
ENSPTIG00000017424	EDC3	99	59.844	ENSACIG00000005330	EDC3	99	59.844	Amphilophus_citrinellus
ENSPTIG00000017424	EDC3	100	69.608	ENSAOCG00000005431	edc3	100	69.608	Amphiprion_ocellaris
ENSPTIG00000017424	EDC3	100	58.527	ENSAOCG00000009103	-	100	58.527	Amphiprion_ocellaris
ENSPTIG00000017424	EDC3	100	58.527	ENSAPEG00000007841	EDC3	100	58.527	Amphiprion_percula
ENSPTIG00000017424	EDC3	100	69.608	ENSAPEG00000000968	edc3	100	69.608	Amphiprion_percula
ENSPTIG00000017424	EDC3	100	69.216	ENSATEG00000015505	edc3	100	69.216	Anabas_testudineus
ENSPTIG00000017424	EDC3	100	58.286	ENSATEG00000004205	-	100	58.286	Anabas_testudineus
ENSPTIG00000017424	EDC3	90	86.593	ENSAPLG00000008957	EDC3	100	86.593	Anas_platyrhynchos
ENSPTIG00000017424	EDC3	78	86.650	ENSACAG00000000460	-	100	86.650	Anolis_carolinensis
ENSPTIG00000017424	EDC3	100	96.654	ENSANAG00000024078	EDC3	100	96.654	Aotus_nancymaae
ENSPTIG00000017424	EDC3	99	58.090	ENSACLG00000018776	-	100	57.977	Astatotilapia_calliptera
ENSPTIG00000017424	EDC3	100	67.191	ENSACLG00000007232	edc3	100	67.191	Astatotilapia_calliptera
ENSPTIG00000017424	EDC3	100	71.094	ENSAMXG00000001589	edc3	100	71.094	Astyanax_mexicanus
ENSPTIG00000017424	EDC3	100	96.850	ENSBTAG00000007308	EDC3	100	96.850	Bos_taurus
ENSPTIG00000017424	EDC3	100	96.850	ENSCJAG00000017681	EDC3	100	96.850	Callithrix_jacchus
ENSPTIG00000017424	EDC3	100	98.622	ENSCAFG00000017935	EDC3	100	98.622	Canis_familiaris
ENSPTIG00000017424	EDC3	100	98.622	ENSCAFG00020003909	EDC3	100	98.622	Canis_lupus_dingo
ENSPTIG00000017424	EDC3	100	96.654	ENSCHIG00000023658	EDC3	100	96.654	Capra_hircus
ENSPTIG00000017424	EDC3	100	97.047	ENSTSYG00000004822	EDC3	100	97.047	Carlito_syrichta
ENSPTIG00000017424	EDC3	100	95.866	ENSCPOG00000015595	EDC3	100	95.866	Cavia_porcellus
ENSPTIG00000017424	EDC3	100	97.047	ENSCCAG00000021663	EDC3	100	97.047	Cebus_capucinus
ENSPTIG00000017424	EDC3	100	97.047	ENSCATG00000037511	EDC3	100	97.047	Cercocebus_atys
ENSPTIG00000017424	EDC3	100	95.669	ENSCLAG00000005700	EDC3	100	95.669	Chinchilla_lanigera
ENSPTIG00000017424	EDC3	100	97.047	ENSCSAG00000014239	EDC3	100	97.047	Chlorocebus_sabaeus
ENSPTIG00000017424	EDC3	100	89.173	ENSCPBG00000024239	EDC3	100	89.173	Chrysemys_picta_bellii
ENSPTIG00000017424	EDC3	100	37.885	ENSCING00000022142	-	99	37.885	Ciona_intestinalis
ENSPTIG00000017424	EDC3	100	97.047	ENSCANG00000028699	EDC3	100	97.047	Colobus_angolensis_palliatus
ENSPTIG00000017424	EDC3	100	96.063	ENSCGRG00001013874	Edc3	100	96.063	Cricetulus_griseus_chok1gshd
ENSPTIG00000017424	EDC3	100	96.063	ENSCGRG00000011885	Edc3	100	96.063	Cricetulus_griseus_crigri
ENSPTIG00000017424	EDC3	99	69.685	ENSCSEG00000012996	edc3	99	69.685	Cynoglossus_semilaevis
ENSPTIG00000017424	EDC3	100	68.369	ENSCVAG00000008023	edc3	100	68.369	Cyprinodon_variegatus
ENSPTIG00000017424	EDC3	99	69.006	ENSDARG00000051931	edc3	99	69.006	Danio_rerio
ENSPTIG00000017424	EDC3	100	84.690	ENSDNOG00000030661	EDC3	100	84.690	Dasypus_novemcinctus
ENSPTIG00000017424	EDC3	64	96.296	ENSETEG00000002398	-	64	96.296	Echinops_telfairi
ENSPTIG00000017424	EDC3	100	96.850	ENSEASG00005005071	EDC3	100	96.850	Equus_asinus_asinus
ENSPTIG00000017424	EDC3	100	96.850	ENSECAG00000017994	EDC3	100	96.850	Equus_caballus
ENSPTIG00000017424	EDC3	100	65.497	ENSELUG00000005794	edc3	100	65.497	Esox_lucius
ENSPTIG00000017424	EDC3	100	62.257	ENSELUG00000007607	EDC3	100	62.257	Esox_lucius
ENSPTIG00000017424	EDC3	100	99.606	ENSFCAG00000002014	EDC3	100	99.606	Felis_catus
ENSPTIG00000017424	EDC3	98	83.968	ENSFALG00000004543	EDC3	96	83.968	Ficedula_albicollis
ENSPTIG00000017424	EDC3	100	95.079	ENSFDAG00000012582	EDC3	100	95.079	Fukomys_damarensis
ENSPTIG00000017424	EDC3	100	69.020	ENSFHEG00000009375	edc3	100	69.020	Fundulus_heteroclitus
ENSPTIG00000017424	EDC3	100	68.031	ENSGMOG00000002715	edc3	100	68.031	Gadus_morhua
ENSPTIG00000017424	EDC3	100	87.795	ENSGALG00000040181	EDC3	100	87.795	Gallus_gallus
ENSPTIG00000017424	EDC3	100	67.780	ENSGAFG00000014433	edc3	100	67.780	Gambusia_affinis
ENSPTIG00000017424	EDC3	99	54.932	ENSGACG00000014671	EDC3	99	56.311	Gasterosteus_aculeatus
ENSPTIG00000017424	EDC3	100	68.369	ENSGACG00000009783	edc3	100	68.369	Gasterosteus_aculeatus
ENSPTIG00000017424	EDC3	100	88.780	ENSGAGG00000023477	EDC3	100	88.780	Gopherus_agassizii
ENSPTIG00000017424	EDC3	100	96.654	ENSGGOG00000003552	EDC3	100	96.654	Gorilla_gorilla
ENSPTIG00000017424	EDC3	100	67.191	ENSHBUG00000003635	edc3	100	67.191	Haplochromis_burtoni
ENSPTIG00000017424	EDC3	99	58.090	ENSHBUG00000020817	EDC3	99	58.090	Haplochromis_burtoni
ENSPTIG00000017424	EDC3	100	68.555	ENSHCOG00000016834	edc3	100	68.689	Hippocampus_comes
ENSPTIG00000017424	EDC3	99	70.254	ENSIPUG00000005695	edc3	100	70.254	Ictalurus_punctatus
ENSPTIG00000017424	EDC3	100	96.654	ENSSTOG00000013936	EDC3	100	96.654	Ictidomys_tridecemlineatus
ENSPTIG00000017424	EDC3	100	95.276	ENSJJAG00000008074	Edc3	100	95.276	Jaculus_jaculus
ENSPTIG00000017424	EDC3	100	68.959	ENSKMAG00000001243	edc3	100	68.959	Kryptolebias_marmoratus
ENSPTIG00000017424	EDC3	100	55.709	ENSKMAG00000001987	EDC3	100	55.709	Kryptolebias_marmoratus
ENSPTIG00000017424	EDC3	100	68.824	ENSLBEG00000013435	edc3	99	68.824	Labrus_bergylta
ENSPTIG00000017424	EDC3	100	57.965	ENSLBEG00000017984	EDC3	100	57.965	Labrus_bergylta
ENSPTIG00000017424	EDC3	100	77.864	ENSLACG00000014149	EDC3	100	77.864	Latimeria_chalumnae
ENSPTIG00000017424	EDC3	99	66.602	ENSLOCG00000014625	edc3	99	66.862	Lepisosteus_oculatus
ENSPTIG00000017424	EDC3	100	94.882	ENSLAFG00000002992	EDC3	100	94.882	Loxodonta_africana
ENSPTIG00000017424	EDC3	100	96.850	ENSMFAG00000043074	EDC3	100	96.850	Macaca_fascicularis
ENSPTIG00000017424	EDC3	100	96.850	ENSMMUG00000011071	EDC3	100	96.850	Macaca_mulatta
ENSPTIG00000017424	EDC3	100	96.850	ENSMNEG00000035316	EDC3	100	96.850	Macaca_nemestrina
ENSPTIG00000017424	EDC3	100	97.047	ENSMLEG00000030372	EDC3	100	97.047	Mandrillus_leucophaeus
ENSPTIG00000017424	EDC3	99	56.250	ENSMAMG00000005423	-	99	56.250	Mastacembelus_armatus
ENSPTIG00000017424	EDC3	100	69.941	ENSMAMG00000000505	edc3	100	69.941	Mastacembelus_armatus
ENSPTIG00000017424	EDC3	100	58.480	ENSMZEG00005005654	EDC3	100	58.480	Maylandia_zebra
ENSPTIG00000017424	EDC3	100	67.191	ENSMZEG00005004892	edc3	100	67.191	Maylandia_zebra
ENSPTIG00000017424	EDC3	100	86.811	ENSMGAG00000002617	EDC3	100	86.811	Meleagris_gallopavo
ENSPTIG00000017424	EDC3	100	96.063	ENSMICG00000043190	EDC3	100	96.063	Microcebus_murinus
ENSPTIG00000017424	EDC3	100	96.063	ENSMOCG00000016205	Edc3	100	96.063	Microtus_ochrogaster
ENSPTIG00000017424	EDC3	99	68.762	ENSMMOG00000012278	edc3	99	68.762	Mola_mola
ENSPTIG00000017424	EDC3	100	92.323	ENSMODG00000009442	EDC3	100	92.323	Monodelphis_domestica
ENSPTIG00000017424	EDC3	100	69.352	ENSMALG00000008658	edc3	100	69.352	Monopterus_albus
ENSPTIG00000017424	EDC3	100	95.079	MGP_CAROLIEiJ_G0032280	Edc3	100	96.923	Mus_caroli
ENSPTIG00000017424	EDC3	100	94.685	ENSMUSG00000038957	Edc3	100	96.923	Mus_musculus
ENSPTIG00000017424	EDC3	100	95.276	MGP_PahariEiJ_G0015146	Edc3	100	96.923	Mus_pahari
ENSPTIG00000017424	EDC3	100	94.488	MGP_SPRETEiJ_G0033420	Edc3	100	96.923	Mus_spretus
ENSPTIG00000017424	EDC3	100	99.016	ENSMPUG00000017293	EDC3	100	99.016	Mustela_putorius_furo
ENSPTIG00000017424	EDC3	100	96.667	ENSMLUG00000016382	EDC3	100	96.667	Myotis_lucifugus
ENSPTIG00000017424	EDC3	100	95.079	ENSNGAG00000010923	Edc3	100	95.079	Nannospalax_galili
ENSPTIG00000017424	EDC3	99	58.594	ENSNBRG00000007881	EDC3	99	58.594	Neolamprologus_brichardi
ENSPTIG00000017424	EDC3	100	67.780	ENSNBRG00000002434	edc3	100	67.780	Neolamprologus_brichardi
ENSPTIG00000017424	EDC3	100	87.008	ENSNLEG00000014577	EDC3	100	87.008	Nomascus_leucogenys
ENSPTIG00000017424	EDC3	100	91.142	ENSMEUG00000009077	EDC3	100	91.142	Notamacropus_eugenii
ENSPTIG00000017424	EDC3	79	98.148	ENSOPRG00000009540	-	79	98.148	Ochotona_princeps
ENSPTIG00000017424	EDC3	100	67.387	ENSONIG00000008434	edc3	100	67.387	Oreochromis_niloticus
ENSPTIG00000017424	EDC3	100	60.117	ENSONIG00000002932	-	100	60.117	Oreochromis_niloticus
ENSPTIG00000017424	EDC3	78	92.191	ENSOCUG00000017740	EDC3	86	92.191	Oryctolagus_cuniculus
ENSPTIG00000017424	EDC3	100	56.641	ENSORLG00000014399	-	98	56.641	Oryzias_latipes
ENSPTIG00000017424	EDC3	100	67.191	ENSORLG00000004883	edc3	100	67.191	Oryzias_latipes
ENSPTIG00000017424	EDC3	100	67.191	ENSORLG00020012262	edc3	100	67.191	Oryzias_latipes_hni
ENSPTIG00000017424	EDC3	100	56.641	ENSORLG00020019446	-	100	56.641	Oryzias_latipes_hni
ENSPTIG00000017424	EDC3	100	67.383	ENSORLG00015005634	edc3	100	67.383	Oryzias_latipes_hsok
ENSPTIG00000017424	EDC3	100	56.250	ENSORLG00015017635	-	96	56.250	Oryzias_latipes_hsok
ENSPTIG00000017424	EDC3	100	56.836	ENSOMEG00000017354	EDC3	100	56.836	Oryzias_melastigma
ENSPTIG00000017424	EDC3	100	68.750	ENSOMEG00000014026	edc3	100	68.750	Oryzias_melastigma
ENSPTIG00000017424	EDC3	100	96.260	ENSOGAG00000014441	EDC3	100	96.260	Otolemur_garnettii
ENSPTIG00000017424	EDC3	100	96.267	ENSOARG00000003476	EDC3	100	96.267	Ovis_aries
ENSPTIG00000017424	EDC3	100	96.654	ENSPPAG00000040143	EDC3	100	96.654	Pan_paniscus
ENSPTIG00000017424	EDC3	100	100.000	ENSPPRG00000006257	EDC3	100	100.000	Panthera_pardus
ENSPTIG00000017424	EDC3	100	96.654	ENSPTRG00000007279	EDC3	100	96.654	Pan_troglodytes
ENSPTIG00000017424	EDC3	100	97.047	ENSPANG00000015997	EDC3	100	97.047	Papio_anubis
ENSPTIG00000017424	EDC3	100	66.602	ENSPKIG00000019810	EDC3	100	66.602	Paramormyrops_kingsleyae
ENSPTIG00000017424	EDC3	100	68.750	ENSPKIG00000004416	edc3	100	69.727	Paramormyrops_kingsleyae
ENSPTIG00000017424	EDC3	100	83.465	ENSPSIG00000008474	EDC3	100	83.661	Pelodiscus_sinensis
ENSPTIG00000017424	EDC3	100	67.123	ENSPMGG00000007223	edc3	100	67.123	Periophthalmus_magnuspinnatus
ENSPTIG00000017424	EDC3	100	95.669	ENSPEMG00000015260	Edc3	100	95.669	Peromyscus_maniculatus_bairdii
ENSPTIG00000017424	EDC3	99	90.335	ENSPCIG00000006276	EDC3	70	90.335	Phascolarctos_cinereus
ENSPTIG00000017424	EDC3	100	68.959	ENSPFOG00000012204	edc3	100	68.959	Poecilia_formosa
ENSPTIG00000017424	EDC3	100	68.959	ENSPLAG00000014420	edc3	100	68.959	Poecilia_latipinna
ENSPTIG00000017424	EDC3	100	68.959	ENSPMEG00000023289	edc3	100	68.959	Poecilia_mexicana
ENSPTIG00000017424	EDC3	100	69.155	ENSPREG00000016022	edc3	100	69.155	Poecilia_reticulata
ENSPTIG00000017424	EDC3	100	95.472	ENSPPYG00000006642	EDC3	100	95.472	Pongo_abelii
ENSPTIG00000017424	EDC3	88	98.148	ENSPCAG00000002802	EDC3	88	98.148	Procavia_capensis
ENSPTIG00000017424	EDC3	100	96.654	ENSPCOG00000013364	EDC3	100	96.654	Propithecus_coquereli
ENSPTIG00000017424	EDC3	100	95.866	ENSPVAG00000014733	EDC3	100	95.866	Pteropus_vampyrus
ENSPTIG00000017424	EDC3	100	67.191	ENSPNYG00000021797	edc3	100	67.191	Pundamilia_nyererei
ENSPTIG00000017424	EDC3	99	58.090	ENSPNYG00000009669	EDC3	99	58.090	Pundamilia_nyererei
ENSPTIG00000017424	EDC3	100	70.039	ENSPNAG00000019657	edc3	100	70.039	Pygocentrus_nattereri
ENSPTIG00000017424	EDC3	99	95.446	ENSRNOG00000019579	Edc3	99	95.446	Rattus_norvegicus
ENSPTIG00000017424	EDC3	100	96.654	ENSRBIG00000019488	EDC3	100	96.654	Rhinopithecus_bieti
ENSPTIG00000017424	EDC3	100	96.654	ENSRROG00000034959	EDC3	100	96.654	Rhinopithecus_roxellana
ENSPTIG00000017424	EDC3	100	96.850	ENSSBOG00000004896	EDC3	100	96.850	Saimiri_boliviensis_boliviensis
ENSPTIG00000017424	EDC3	96	91.207	ENSSHAG00000015075	EDC3	95	91.207	Sarcophilus_harrisii
ENSPTIG00000017424	EDC3	100	64.786	ENSSFOG00015002439	edc3	100	65.175	Scleropages_formosus
ENSPTIG00000017424	EDC3	100	70.817	ENSSFOG00015016939	edc3	100	71.012	Scleropages_formosus
ENSPTIG00000017424	EDC3	99	56.725	ENSSMAG00000010176	-	99	56.725	Scophthalmus_maximus
ENSPTIG00000017424	EDC3	100	68.627	ENSSMAG00000010695	edc3	100	68.959	Scophthalmus_maximus
ENSPTIG00000017424	EDC3	100	69.216	ENSSDUG00000021844	edc3	100	69.216	Seriola_dumerili
ENSPTIG00000017424	EDC3	100	59.345	ENSSDUG00000007671	EDC3	100	59.345	Seriola_dumerili
ENSPTIG00000017424	EDC3	100	69.216	ENSSLDG00000022046	edc3	100	69.216	Seriola_lalandi_dorsalis
ENSPTIG00000017424	EDC3	81	95.565	ENSSARG00000003907	EDC3	80	95.565	Sorex_araneus
ENSPTIG00000017424	EDC3	100	87.598	ENSSPUG00000008232	EDC3	100	87.598	Sphenodon_punctatus
ENSPTIG00000017424	EDC3	100	69.608	ENSSPAG00000010009	edc3	100	69.608	Stegastes_partitus
ENSPTIG00000017424	EDC3	100	57.588	ENSSPAG00000020327	EDC3	100	57.588	Stegastes_partitus
ENSPTIG00000017424	EDC3	100	96.654	ENSSSCG00000001903	EDC3	100	96.654	Sus_scrofa
ENSPTIG00000017424	EDC3	100	87.402	ENSTGUG00000004007	EDC3	100	87.402	Taeniopygia_guttata
ENSPTIG00000017424	EDC3	100	69.548	ENSTRUG00000017078	edc3	100	69.548	Takifugu_rubripes
ENSPTIG00000017424	EDC3	100	68.155	ENSTNIG00000016047	edc3	100	68.155	Tetraodon_nigroviridis
ENSPTIG00000017424	EDC3	100	96.457	ENSTTRG00000007990	EDC3	100	96.457	Tursiops_truncatus
ENSPTIG00000017424	EDC3	100	99.016	ENSUAMG00000026710	-	100	99.016	Ursus_americanus
ENSPTIG00000017424	EDC3	100	99.016	ENSUMAG00000005006	EDC3	96	99.016	Ursus_maritimus
ENSPTIG00000017424	EDC3	79	85.185	ENSVPAG00000003499	-	79	85.185	Vicugna_pacos
ENSPTIG00000017424	EDC3	100	98.622	ENSVVUG00000018601	EDC3	100	98.622	Vulpes_vulpes
ENSPTIG00000017424	EDC3	68	81.609	ENSXETG00000010622	edc3	99	82.759	Xenopus_tropicalis
ENSPTIG00000017424	EDC3	100	68.762	ENSXMAG00000007377	edc3	100	68.762	Xiphophorus_maculatus