EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000017447 (Gene tree)
Gene ID: 102950262
Gene Symbol: SMARCA4
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 71838 bases
Position: chrKE721722.1:632890-704727
Accession: 102950262
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020150	ResIII	PF04851.15	1.6e-09	1	1
ENSPTIP00000020122	ResIII	PF04851.15	1.6e-09	1	1
ENSPTIP00000020122	BRK	PF07533.16	9.6e-18	1	1
ENSPTIP00000020150	BRK	PF07533.16	9.6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024457	SMARCA4-201	4833	XM_007079346	ENSPTIP00000020122	1610 (aa)	XP_007079408	-
ENSPTIT00000024485	SMARCA4-202	4827	-	ENSPTIP00000020150	1608 (aa)	-	-

Gene Model

Click here to download ENSPTIG00000017447's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg04714	Thermogenesis	KEGG
ptg05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017447's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017447	SMARCA4	94	99.517	ENSG00000127616	SMARCA4	100	99.363	Homo_sapiens
ENSPTIG00000017447	SMARCA4	95	79.497	ENSAPOG00000004542	SMARCA4	91	87.360	Acanthochromis_polyacanthus
ENSPTIG00000017447	SMARCA4	76	84.160	ENSAPOG00000003509	smarca4a	98	83.255	Acanthochromis_polyacanthus
ENSPTIG00000017447	SMARCA4	94	99.517	ENSAMEG00000010868	SMARCA4	93	99.517	Ailuropoda_melanoleuca
ENSPTIG00000017447	SMARCA4	97	81.334	ENSACIG00000021550	smarca4a	77	86.360	Amphilophus_citrinellus
ENSPTIG00000017447	SMARCA4	94	81.310	ENSAOCG00000009450	-	77	87.368	Amphiprion_ocellaris
ENSPTIG00000017447	SMARCA4	100	78.588	ENSAPEG00000023108	-	93	85.650	Amphiprion_percula
ENSPTIG00000017447	SMARCA4	100	81.493	ENSATEG00000011524	smarca4a	93	84.869	Anabas_testudineus
ENSPTIG00000017447	SMARCA4	99	78.627	ENSATEG00000001094	-	91	85.528	Anabas_testudineus
ENSPTIG00000017447	SMARCA4	94	99.034	ENSANAG00000036991	SMARCA4	93	99.034	Aotus_nancymaae
ENSPTIG00000017447	SMARCA4	97	82.196	ENSACLG00000000163	smarca4a	78	86.239	Astatotilapia_calliptera
ENSPTIG00000017447	SMARCA4	95	79.298	ENSACLG00000008638	-	91	87.249	Astatotilapia_calliptera
ENSPTIG00000017447	SMARCA4	97	80.878	ENSAMXG00000021023	smarca4a	95	88.889	Astyanax_mexicanus
ENSPTIG00000017447	SMARCA4	94	81.621	ENSAMXG00000011238	-	81	87.197	Astyanax_mexicanus
ENSPTIG00000017447	SMARCA4	81	93.192	ENSBTAG00000019220	SMARCA4	80	93.958	Bos_taurus
ENSPTIG00000017447	SMARCA4	100	87.859	ENSCJAG00000005936	SMARCA4	100	87.859	Callithrix_jacchus
ENSPTIG00000017447	SMARCA4	99	87.337	ENSCAFG00020024620	SMARCA4	91	100.000	Canis_lupus_dingo
ENSPTIG00000017447	SMARCA4	81	87.774	ENSCHIG00000015318	SMARCA4	80	88.998	Capra_hircus
ENSPTIG00000017447	SMARCA4	94	97.101	ENSTSYG00000012966	SMARCA4	93	97.101	Carlito_syrichta
ENSPTIG00000017447	SMARCA4	88	97.101	ENSCAPG00000015932	SMARCA4	94	93.237	Cavia_aperea
ENSPTIG00000017447	SMARCA4	94	99.517	ENSCCAG00000031660	SMARCA4	93	99.517	Cebus_capucinus
ENSPTIG00000017447	SMARCA4	94	99.517	ENSCATG00000029530	SMARCA4	93	99.517	Cercocebus_atys
ENSPTIG00000017447	SMARCA4	100	89.509	ENSCLAG00000011946	SMARCA4	81	94.184	Chinchilla_lanigera
ENSPTIG00000017447	SMARCA4	94	99.034	ENSCANG00000036013	SMARCA4	93	99.034	Colobus_angolensis_palliatus
ENSPTIG00000017447	SMARCA4	94	98.068	ENSCGRG00000017242	Smarca4	93	98.068	Cricetulus_griseus_crigri
ENSPTIG00000017447	SMARCA4	97	80.911	ENSCVAG00000006979	smarca4a	79	86.284	Cyprinodon_variegatus
ENSPTIG00000017447	SMARCA4	94	81.057	ENSCVAG00000003018	-	76	87.531	Cyprinodon_variegatus
ENSPTIG00000017447	SMARCA4	100	80.678	ENSDARG00000077226	smarca4a	79	85.843	Danio_rerio
ENSPTIG00000017447	SMARCA4	93	80.026	ENSDARG00000104339	SMARCA4	77	87.179	Danio_rerio
ENSPTIG00000017447	SMARCA4	94	91.576	ENSDNOG00000048847	SMARCA4	92	94.809	Dasypus_novemcinctus
ENSPTIG00000017447	SMARCA4	94	83.571	ENSETEG00000013361	SMARCA4	94	83.571	Echinops_telfairi
ENSPTIG00000017447	SMARCA4	94	98.068	ENSEASG00005006167	SMARCA4	93	98.068	Equus_asinus_asinus
ENSPTIG00000017447	SMARCA4	99	74.374	ENSELUG00000023232	-	91	81.874	Esox_lucius
ENSPTIG00000017447	SMARCA4	100	81.726	ENSELUG00000010247	smarca4a	80	85.564	Esox_lucius
ENSPTIG00000017447	SMARCA4	75	92.741	ENSFALG00000004208	SMARCA4	76	92.817	Ficedula_albicollis
ENSPTIG00000017447	SMARCA4	100	79.260	ENSFHEG00000007902	-	93	85.994	Fundulus_heteroclitus
ENSPTIG00000017447	SMARCA4	100	78.817	ENSFHEG00000010182	smarca4a	95	83.170	Fundulus_heteroclitus
ENSPTIG00000017447	SMARCA4	88	82.521	ENSGMOG00000002649	smarca4a	86	81.882	Gadus_morhua
ENSPTIG00000017447	SMARCA4	92	79.349	ENSGMOG00000005756	-	86	78.822	Gadus_morhua
ENSPTIG00000017447	SMARCA4	90	81.212	ENSGAFG00000014900	smarca4a	88	85.474	Gambusia_affinis
ENSPTIG00000017447	SMARCA4	99	77.730	ENSGAFG00000008827	-	81	82.938	Gambusia_affinis
ENSPTIG00000017447	SMARCA4	99	77.483	ENSGACG00000016033	-	79	82.701	Gasterosteus_aculeatus
ENSPTIG00000017447	SMARCA4	98	79.412	ENSGACG00000006691	smarca4a	79	84.523	Gasterosteus_aculeatus
ENSPTIG00000017447	SMARCA4	94	99.517	ENSGGOG00000009882	SMARCA4	93	99.517	Gorilla_gorilla
ENSPTIG00000017447	SMARCA4	100	81.650	ENSHBUG00000021172	smarca4a	79	86.898	Haplochromis_burtoni
ENSPTIG00000017447	SMARCA4	100	77.999	ENSHBUG00000005447	-	93	85.316	Haplochromis_burtoni
ENSPTIG00000017447	SMARCA4	95	81.054	ENSHCOG00000009510	smarca4a	96	78.647	Hippocampus_comes
ENSPTIG00000017447	SMARCA4	100	81.481	ENSIPUG00000006107	smarca4a	93	87.724	Ictalurus_punctatus
ENSPTIG00000017447	SMARCA4	99	78.646	ENSIPUG00000016346	-	80	85.478	Ictalurus_punctatus
ENSPTIG00000017447	SMARCA4	100	81.036	ENSKMAG00000011931	smarca4a	80	86.284	Kryptolebias_marmoratus
ENSPTIG00000017447	SMARCA4	100	78.966	ENSKMAG00000019518	-	99	76.268	Kryptolebias_marmoratus
ENSPTIG00000017447	SMARCA4	76	82.770	ENSLBEG00000020655	-	79	74.496	Labrus_bergylta
ENSPTIG00000017447	SMARCA4	51	82.974	ENSLACG00000015309	SMARCA4	87	91.011	Latimeria_chalumnae
ENSPTIG00000017447	SMARCA4	100	82.577	ENSLOCG00000007820	smarca4a	79	87.404	Lepisosteus_oculatus
ENSPTIG00000017447	SMARCA4	94	96.682	ENSLAFG00000001433	SMARCA4	93	96.682	Loxodonta_africana
ENSPTIG00000017447	SMARCA4	94	99.517	ENSMFAG00000032146	SMARCA4	93	99.517	Macaca_fascicularis
ENSPTIG00000017447	SMARCA4	94	99.517	ENSMMUG00000012042	SMARCA4	93	99.517	Macaca_mulatta
ENSPTIG00000017447	SMARCA4	94	99.034	ENSMNEG00000028512	SMARCA4	93	99.034	Macaca_nemestrina
ENSPTIG00000017447	SMARCA4	94	99.517	ENSMLEG00000034976	SMARCA4	93	99.517	Mandrillus_leucophaeus
ENSPTIG00000017447	SMARCA4	99	78.258	ENSMAMG00000002841	-	93	85.800	Mastacembelus_armatus
ENSPTIG00000017447	SMARCA4	98	78.210	ENSMZEG00005023861	-	91	87.089	Maylandia_zebra
ENSPTIG00000017447	SMARCA4	100	81.395	ENSMZEG00005003889	smarca4a	79	86.456	Maylandia_zebra
ENSPTIG00000017447	SMARCA4	94	98.551	ENSMICG00000009806	SMARCA4	93	98.551	Microcebus_murinus
ENSPTIG00000017447	SMARCA4	95	80.737	ENSMMOG00000007571	smarca4a	76	85.982	Mola_mola
ENSPTIG00000017447	SMARCA4	70	95.778	MGP_CAROLIEiJ_G0031879	Smarca4	90	96.309	Mus_caroli
ENSPTIG00000017447	SMARCA4	70	95.778	ENSMUSG00000032187	Smarca4	90	96.309	Mus_musculus
ENSPTIG00000017447	SMARCA4	70	95.778	MGP_PahariEiJ_G0014745	Smarca4	90	96.309	Mus_pahari
ENSPTIG00000017447	SMARCA4	70	95.778	MGP_SPRETEiJ_G0033003	Smarca4	90	96.309	Mus_spretus
ENSPTIG00000017447	SMARCA4	89	78.674	ENSNBRG00000018865	-	80	86.753	Neolamprologus_brichardi
ENSPTIG00000017447	SMARCA4	94	99.034	ENSNLEG00000012389	SMARCA4	89	99.034	Nomascus_leucogenys
ENSPTIG00000017447	SMARCA4	78	95.652	ENSOPRG00000000885	-	72	100.000	Ochotona_princeps
ENSPTIG00000017447	SMARCA4	100	89.890	ENSODEG00000017127	SMARCA4	81	93.958	Octodon_degus
ENSPTIG00000017447	SMARCA4	100	82.104	ENSONIG00000008196	smarca4a	80	86.672	Oreochromis_niloticus
ENSPTIG00000017447	SMARCA4	100	78.057	ENSONIG00000018040	-	93	85.392	Oreochromis_niloticus
ENSPTIG00000017447	SMARCA4	80	85.824	ENSOCUG00000001787	SMARCA4	79	86.480	Oryctolagus_cuniculus
ENSPTIG00000017447	SMARCA4	95	78.017	ENSORLG00000003955	-	93	85.327	Oryzias_latipes
ENSPTIG00000017447	SMARCA4	96	80.074	ENSORLG00000015452	smarca4a	79	85.822	Oryzias_latipes
ENSPTIG00000017447	SMARCA4	95	78.031	ENSORLG00020009728	-	93	85.263	Oryzias_latipes_hni
ENSPTIG00000017447	SMARCA4	100	79.713	ENSORLG00020004611	smarca4a	79	87.390	Oryzias_latipes_hni
ENSPTIG00000017447	SMARCA4	100	79.832	ENSORLG00015016560	smarca4a	79	85.973	Oryzias_latipes_hsok
ENSPTIG00000017447	SMARCA4	99	77.864	ENSORLG00015007739	-	93	85.102	Oryzias_latipes_hsok
ENSPTIG00000017447	SMARCA4	96	77.374	ENSOMEG00000016626	-	93	85.241	Oryzias_melastigma
ENSPTIG00000017447	SMARCA4	100	80.622	ENSOMEG00000007486	smarca4a	79	86.048	Oryzias_melastigma
ENSPTIG00000017447	SMARCA4	83	97.585	ENSOGAG00000016148	SMARCA4	92	97.585	Otolemur_garnettii
ENSPTIG00000017447	SMARCA4	81	92.313	ENSOARG00000017454	SMARCA4	80	92.906	Ovis_aries
ENSPTIG00000017447	SMARCA4	94	99.517	ENSPPAG00000043191	SMARCA4	93	99.517	Pan_paniscus
ENSPTIG00000017447	SMARCA4	94	99.517	ENSPTRG00000010488	SMARCA4	93	99.517	Pan_troglodytes
ENSPTIG00000017447	SMARCA4	94	99.517	ENSPANG00000011042	SMARCA4	93	99.517	Papio_anubis
ENSPTIG00000017447	SMARCA4	98	80.062	ENSPKIG00000010087	-	80	86.934	Paramormyrops_kingsleyae
ENSPTIG00000017447	SMARCA4	100	81.710	ENSPKIG00000007770	SMARCA4	79	86.917	Paramormyrops_kingsleyae
ENSPTIG00000017447	SMARCA4	81	92.069	ENSPSIG00000005547	SMARCA4	82	92.459	Pelodiscus_sinensis
ENSPTIG00000017447	SMARCA4	100	80.144	ENSPFOG00000007892	smarca4a	94	83.976	Poecilia_formosa
ENSPTIG00000017447	SMARCA4	97	84.017	ENSPFOG00000012930	-	93	85.843	Poecilia_formosa
ENSPTIG00000017447	SMARCA4	100	79.976	ENSPLAG00000014294	smarca4a	96	83.835	Poecilia_latipinna
ENSPTIG00000017447	SMARCA4	94	84.906	ENSPMEG00000003725	smarca4a	90	86.120	Poecilia_mexicana
ENSPTIG00000017447	SMARCA4	92	85.168	ENSPMEG00000008929	-	89	87.811	Poecilia_mexicana
ENSPTIG00000017447	SMARCA4	97	79.789	ENSPREG00000014608	smarca4a	78	87.149	Poecilia_reticulata
ENSPTIG00000017447	SMARCA4	99	76.870	ENSPREG00000014823	-	89	87.971	Poecilia_reticulata
ENSPTIG00000017447	SMARCA4	75	92.715	ENSPCAG00000014054	SMARCA4	70	92.715	Procavia_capensis
ENSPTIG00000017447	SMARCA4	94	98.068	ENSPCOG00000023011	SMARCA4	93	98.068	Propithecus_coquereli
ENSPTIG00000017447	SMARCA4	77	98.068	ENSPVAG00000007787	SMARCA4	88	100.000	Pteropus_vampyrus
ENSPTIG00000017447	SMARCA4	97	82.331	ENSPNYG00000000717	smarca4a	91	86.846	Pundamilia_nyererei
ENSPTIG00000017447	SMARCA4	95	79.073	ENSPNYG00000023995	-	81	87.019	Pundamilia_nyererei
ENSPTIG00000017447	SMARCA4	95	81.297	ENSPNAG00000006636	-	76	87.740	Pygocentrus_nattereri
ENSPTIG00000017447	SMARCA4	94	99.034	ENSRBIG00000038696	SMARCA4	93	99.034	Rhinopithecus_bieti
ENSPTIG00000017447	SMARCA4	94	99.034	ENSRROG00000045509	SMARCA4	93	99.034	Rhinopithecus_roxellana
ENSPTIG00000017447	SMARCA4	94	99.517	ENSSBOG00000026896	SMARCA4	93	99.517	Saimiri_boliviensis_boliviensis
ENSPTIG00000017447	SMARCA4	100	82.290	ENSSFOG00015013823	smarca4	79	87.678	Scleropages_formosus
ENSPTIG00000017447	SMARCA4	96	80.910	ENSSFOG00015009921	-	89	86.509	Scleropages_formosus
ENSPTIG00000017447	SMARCA4	100	76.512	ENSSMAG00000014082	-	78	83.396	Scophthalmus_maximus
ENSPTIG00000017447	SMARCA4	100	80.585	ENSSMAG00000003200	smarca4a	79	85.370	Scophthalmus_maximus
ENSPTIG00000017447	SMARCA4	100	78.227	ENSSDUG00000017298	smarca4a	80	81.077	Seriola_dumerili
ENSPTIG00000017447	SMARCA4	99	80.593	ENSSDUG00000005388	-	91	87.440	Seriola_dumerili
ENSPTIG00000017447	SMARCA4	95	81.795	ENSSLDG00000023663	-	77	87.570	Seriola_lalandi_dorsalis
ENSPTIG00000017447	SMARCA4	100	82.036	ENSSLDG00000024486	smarca4a	79	86.662	Seriola_lalandi_dorsalis
ENSPTIG00000017447	SMARCA4	64	100.000	ENSSARG00000013477	SMARCA4	82	100.000	Sorex_araneus
ENSPTIG00000017447	SMARCA4	100	78.738	ENSSPAG00000012533	-	93	85.500	Stegastes_partitus
ENSPTIG00000017447	SMARCA4	53	89.708	ENSTGUG00000015488	-	92	99.145	Taeniopygia_guttata
ENSPTIG00000017447	SMARCA4	89	77.831	ENSTRUG00000004885	smarca4a	94	84.743	Takifugu_rubripes
ENSPTIG00000017447	SMARCA4	95	77.250	ENSTRUG00000001378	SMARCA4	75	85.084	Takifugu_rubripes
ENSPTIG00000017447	SMARCA4	100	77.924	ENSTNIG00000004536	SMARCA4	79	83.534	Tetraodon_nigroviridis
ENSPTIG00000017447	SMARCA4	73	80.469	ENSTNIG00000004859	-	84	89.481	Tetraodon_nigroviridis
ENSPTIG00000017447	SMARCA4	94	99.034	ENSTTRG00000009519	SMARCA4	93	99.034	Tursiops_truncatus
ENSPTIG00000017447	SMARCA4	94	99.517	ENSUMAG00000022005	SMARCA4	94	99.517	Ursus_maritimus
ENSPTIG00000017447	SMARCA4	100	82.285	ENSXETG00000009355	smarca4	81	86.687	Xenopus_tropicalis
ENSPTIG00000017447	SMARCA4	100	80.000	ENSXMAG00000006321	smarca4a	79	85.747	Xiphophorus_maculatus
ENSPTIG00000017447	SMARCA4	100	78.169	ENSXMAG00000007030	-	93	85.919	Xiphophorus_maculatus