EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000017487 (Gene tree)
Gene ID: 102957901
Gene Symbol: ARL5C
Alias: -
Full Name: ADP ribosylation factor like GTPase 5C
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 5486 bases
Position: chrKE721826.1:2719990-2725475
Accession: 102957901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000019804	MMR_HSR1	PF01926.23	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024131	ARL5C-201	1414	XM_007085770	ENSPTIP00000019804	179 (aa)	XP_007085832	UPI00042BCC6F

Gene Model

Click here to download ENSPTIG00000017487's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017487's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000017487	ARL5C	98	47.159	ENSPTIG00000005790	-	97	47.159
ENSPTIG00000017487	ARL5C	98	47.159	ENSPTIG00000009396	ARF1	97	47.159
ENSPTIG00000017487	ARL5C	98	81.143	ENSPTIG00000011231	ARL5B	98	81.143
ENSPTIG00000017487	ARL5C	99	42.697	ENSPTIG00000021020	ARL3	98	42.697
ENSPTIG00000017487	ARL5C	91	40.237	ENSPTIG00000001360	ARL4A	85	40.237
ENSPTIG00000017487	ARL5C	89	77.358	ENSPTIG00000016763	ARL5A	89	77.358
ENSPTIG00000017487	ARL5C	99	39.674	ENSPTIG00000008500	ARL6	98	39.674
ENSPTIG00000017487	ARL5C	98	46.591	ENSPTIG00000002553	-	97	46.591
ENSPTIG00000017487	ARL5C	98	43.750	ENSPTIG00000018850	ARF4	98	43.750
ENSPTIG00000017487	ARL5C	94	35.754	ENSPTIG00000021097	ARFRP1	89	35.754
ENSPTIG00000017487	ARL5C	89	41.667	ENSPTIG00000011404	ARL4C	82	41.667
ENSPTIG00000017487	ARL5C	95	38.372	ENSPTIG00000007233	ARL14	88	38.372
ENSPTIG00000017487	ARL5C	89	46.875	ENSPTIG00000002154	-	96	45.614
ENSPTIG00000017487	ARL5C	74	30.827	ENSPTIG00000011683	ARL10	54	30.597
ENSPTIG00000017487	ARL5C	86	35.625	ENSPTIG00000010084	ARL4D	80	35.625
ENSPTIG00000017487	ARL5C	84	41.060	ENSPTIG00000015160	ARL2-SNX15	81	41.060

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017487	ARL5C	100	89.385	ENSAMEG00000004195	ARL5C	99	89.385	Ailuropoda_melanoleuca
ENSPTIG00000017487	ARL5C	100	81.564	ENSACAG00000003879	-	100	81.564	Anolis_carolinensis
ENSPTIG00000017487	ARL5C	100	93.855	ENSCAFG00000016525	ARL5C	100	93.855	Canis_familiaris
ENSPTIG00000017487	ARL5C	100	89.944	ENSCHIG00000008208	ARL5C	100	89.944	Capra_hircus
ENSPTIG00000017487	ARL5C	59	88.679	ENSCHOG00000013232	-	100	88.679	Choloepus_hoffmanni
ENSPTIG00000017487	ARL5C	99	80.226	ENSCGRG00001000695	Arl5c	99	80.226	Cricetulus_griseus_chok1gshd
ENSPTIG00000017487	ARL5C	99	80.791	ENSCGRG00000007376	Arl5c	99	80.791	Cricetulus_griseus_crigri
ENSPTIG00000017487	ARL5C	100	89.944	ENSDNOG00000019741	ARL5C	100	89.944	Dasypus_novemcinctus
ENSPTIG00000017487	ARL5C	100	87.151	ENSDORG00000016304	Arl5c	100	87.151	Dipodomys_ordii
ENSPTIG00000017487	ARL5C	92	93.293	ENSEASG00005001922	ARL5C	76	93.293	Equus_asinus_asinus
ENSPTIG00000017487	ARL5C	100	92.179	ENSECAG00000009024	ARL5C	100	92.179	Equus_caballus
ENSPTIG00000017487	ARL5C	100	97.765	ENSFCAG00000009962	ARL5C	100	97.765	Felis_catus
ENSPTIG00000017487	ARL5C	100	90.503	ENSSTOG00000011104	ARL5C	100	90.503	Ictidomys_tridecemlineatus
ENSPTIG00000017487	ARL5C	100	79.888	ENSLACG00000015332	ARL5C	100	79.888	Latimeria_chalumnae
ENSPTIG00000017487	ARL5C	100	92.179	ENSLAFG00000018248	ARL5C	99	92.179	Loxodonta_africana
ENSPTIG00000017487	ARL5C	99	75.706	ENSMAUG00000012845	Arl5c	87	75.706	Mesocricetus_auratus
ENSPTIG00000017487	ARL5C	100	90.503	ENSMICG00000002661	ARL5C	100	90.503	Microcebus_murinus
ENSPTIG00000017487	ARL5C	100	77.095	ENSMOCG00000000234	Arl5c	100	77.095	Microtus_ochrogaster
ENSPTIG00000017487	ARL5C	100	88.268	MGP_CAROLIEiJ_G0017071	Arl5c	100	88.268	Mus_caroli
ENSPTIG00000017487	ARL5C	100	87.709	ENSMUSG00000038352	Arl5c	100	87.709	Mus_musculus
ENSPTIG00000017487	ARL5C	100	88.268	MGP_PahariEiJ_G0018200	Arl5c	100	88.268	Mus_pahari
ENSPTIG00000017487	ARL5C	100	87.709	MGP_SPRETEiJ_G0017917	Arl5c	100	87.709	Mus_spretus
ENSPTIG00000017487	ARL5C	100	89.385	ENSMLUG00000030149	ARL5C	99	89.385	Myotis_lucifugus
ENSPTIG00000017487	ARL5C	100	89.944	ENSOGAG00000005894	ARL5C	100	89.944	Otolemur_garnettii
ENSPTIG00000017487	ARL5C	100	90.503	ENSOARG00000010377	ARL5C	99	90.503	Ovis_aries
ENSPTIG00000017487	ARL5C	100	98.883	ENSPPRG00000000975	ARL5C	100	98.883	Panthera_pardus
ENSPTIG00000017487	ARL5C	99	87.006	ENSPEMG00000008932	Arl5c	99	87.006	Peromyscus_maniculatus_bairdii
ENSPTIG00000017487	ARL5C	100	91.620	ENSPCOG00000028489	ARL5C	100	91.620	Propithecus_coquereli
ENSPTIG00000017487	ARL5C	94	89.881	ENSPVAG00000008495	ARL5C	99	89.881	Pteropus_vampyrus
ENSPTIG00000017487	ARL5C	100	84.916	ENSRNOG00000036880	Arl5c	100	84.916	Rattus_norvegicus
ENSPTIG00000017487	ARL5C	98	74.857	ENSSBOG00000021022	ARL5C	99	74.857	Saimiri_boliviensis_boliviensis
ENSPTIG00000017487	ARL5C	96	84.211	ENSSPUG00000007555	ARL5C	100	86.503	Sphenodon_punctatus
ENSPTIG00000017487	ARL5C	100	88.827	ENSTBEG00000007274	ARL5C	100	88.827	Tupaia_belangeri
ENSPTIG00000017487	ARL5C	100	91.620	ENSUAMG00000012299	ARL5C	100	91.620	Ursus_americanus
ENSPTIG00000017487	ARL5C	100	92.179	ENSUMAG00000017197	ARL5C	100	92.179	Ursus_maritimus
ENSPTIG00000017487	ARL5C	100	78.212	ENSXETG00000023713	arl5c	92	78.212	Xenopus_tropicalis