EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000017669 (Gene tree)
Gene ID: 102960336
Gene Symbol: DDX39B
Alias: -
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 11443 bases
Position: chrKE722358.1:423285-434727
Accession: 102960336
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020071	ResIII	PF04851.15	1.1e-07	1	1
ENSPTIP00000020071	DEAD	PF00270.29	9.9e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024404	DDX39B-201	1723	XM_007098814	ENSPTIP00000020071	428 (aa)	XP_007098876	UPI00042BA444

Gene Model

Click here to download ENSPTIG00000017669's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg03015	mRNA surveillance pathway	KEGG
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017669's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000017669	DDX39B	100	90.888	ENSPTIG00000017287	DDX39A	100	91.121
ENSPTIG00000017669	DDX39B	92	36.041	ENSPTIG00000012373	-	92	37.297
ENSPTIG00000017669	DDX39B	55	33.471	ENSPTIG00000021955	-	84	33.471
ENSPTIG00000017669	DDX39B	90	35.401	ENSPTIG00000018551	DDX6	79	35.401
ENSPTIG00000017669	DDX39B	81	34.582	ENSPTIG00000019604	DDX47	75	34.582
ENSPTIG00000017669	DDX39B	91	32.832	ENSPTIG00000000185	-	81	32.832
ENSPTIG00000017669	DDX39B	83	30.471	ENSPTIG00000001243	-	55	30.471
ENSPTIG00000017669	DDX39B	91	32.581	ENSPTIG00000008190	DDX19A	82	32.581
ENSPTIG00000017669	DDX39B	82	37.784	ENSPTIG00000009646	EIF4A3	95	37.784
ENSPTIG00000017669	DDX39B	85	31.016	ENSPTIG00000018953	DDX25	99	31.016
ENSPTIG00000017669	DDX39B	86	38.649	ENSPTIG00000011207	EIF4A2	90	38.649
ENSPTIG00000017669	DDX39B	84	32.075	ENSPTIG00000011259	DDX49	76	32.075
ENSPTIG00000017669	DDX39B	77	30.029	ENSPTIG00000010353	DDX5	55	30.029

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017669	DDX39B	100	98.832	ENSG00000198563	DDX39B	100	98.832	Homo_sapiens
ENSPTIG00000017669	DDX39B	100	99.065	ENSAMEG00000009508	DDX39B	99	99.065	Ailuropoda_melanoleuca
ENSPTIG00000017669	DDX39B	99	92.506	ENSACIG00000004534	ddx39b	98	92.523	Amphilophus_citrinellus
ENSPTIG00000017669	DDX39B	100	92.130	ENSATEG00000012366	ddx39b	100	92.130	Anabas_testudineus
ENSPTIG00000017669	DDX39B	100	96.037	ENSACAG00000012240	DDX39B	100	96.037	Anolis_carolinensis
ENSPTIG00000017669	DDX39B	100	98.832	ENSANAG00000030372	DDX39B	100	98.832	Aotus_nancymaae
ENSPTIG00000017669	DDX39B	99	89.631	ENSACLG00000018759	ddx39b	99	89.631	Astatotilapia_calliptera
ENSPTIG00000017669	DDX39B	100	91.972	ENSAMXG00000017837	ddx39b	100	91.972	Astyanax_mexicanus
ENSPTIG00000017669	DDX39B	100	98.598	ENSBTAG00000014490	DDX39B	100	98.598	Bos_taurus
ENSPTIG00000017669	DDX39B	100	98.832	ENSCJAG00000003152	DDX39B	100	98.832	Callithrix_jacchus
ENSPTIG00000017669	DDX39B	100	98.832	ENSCAFG00000000509	DDX39B	100	99.677	Canis_familiaris
ENSPTIG00000017669	DDX39B	100	98.832	ENSCAFG00020020530	DDX39B	100	98.832	Canis_lupus_dingo
ENSPTIG00000017669	DDX39B	100	98.598	ENSCHIG00000004579	DDX39B	100	98.598	Capra_hircus
ENSPTIG00000017669	DDX39B	100	84.346	ENSTSYG00000029741	-	91	86.667	Carlito_syrichta
ENSPTIG00000017669	DDX39B	100	98.832	ENSTSYG00000010226	-	100	98.832	Carlito_syrichta
ENSPTIG00000017669	DDX39B	100	98.598	ENSCAPG00000010066	DDX39B	100	98.598	Cavia_aperea
ENSPTIG00000017669	DDX39B	100	98.598	ENSCPOG00000002335	DDX39B	100	98.598	Cavia_porcellus
ENSPTIG00000017669	DDX39B	100	98.832	ENSCCAG00000027897	DDX39B	100	98.832	Cebus_capucinus
ENSPTIG00000017669	DDX39B	99	89.176	ENSCATG00000043709	DDX39B	99	89.176	Cercocebus_atys
ENSPTIG00000017669	DDX39B	100	98.598	ENSCLAG00000014555	DDX39B	100	98.598	Chinchilla_lanigera
ENSPTIG00000017669	DDX39B	99	98.588	ENSCSAG00000008517	DDX39B	100	98.588	Chlorocebus_sabaeus
ENSPTIG00000017669	DDX39B	64	99.634	ENSCPBG00000014671	-	100	99.634	Chrysemys_picta_bellii
ENSPTIG00000017669	DDX39B	100	98.832	ENSCANG00000041217	DDX39B	100	98.832	Colobus_angolensis_palliatus
ENSPTIG00000017669	DDX39B	83	83.799	ENSCGRG00001021916	-	89	83.799	Cricetulus_griseus_chok1gshd
ENSPTIG00000017669	DDX39B	57	97.143	ENSCGRG00001017315	-	95	97.087	Cricetulus_griseus_chok1gshd
ENSPTIG00000017669	DDX39B	57	97.143	ENSCGRG00000012479	-	76	97.143	Cricetulus_griseus_crigri
ENSPTIG00000017669	DDX39B	100	91.724	ENSDARG00000036069	ddx39b	100	92.184	Danio_rerio
ENSPTIG00000017669	DDX39B	100	98.832	ENSDNOG00000010215	DDX39B	100	98.832	Dasypus_novemcinctus
ENSPTIG00000017669	DDX39B	87	98.930	ENSDORG00000004985	Ddx39b	100	98.930	Dipodomys_ordii
ENSPTIG00000017669	DDX39B	87	85.561	ENSETEG00000009649	DDX39B	87	85.561	Echinops_telfairi
ENSPTIG00000017669	DDX39B	100	98.832	ENSEASG00005017156	DDX39B	100	98.832	Equus_asinus_asinus
ENSPTIG00000017669	DDX39B	100	98.832	ENSECAG00000007750	DDX39B	100	98.832	Equus_caballus
ENSPTIG00000017669	DDX39B	100	91.395	ENSELUG00000017904	ddx39b	100	91.395	Esox_lucius
ENSPTIG00000017669	DDX39B	100	99.065	ENSFCAG00000004497	DDX39B	100	99.065	Felis_catus
ENSPTIG00000017669	DDX39B	100	98.598	ENSFDAG00000011074	DDX39B	100	98.598	Fukomys_damarensis
ENSPTIG00000017669	DDX39B	74	99.367	ENSGAGG00000001300	-	80	99.367	Gopherus_agassizii
ENSPTIG00000017669	DDX39B	100	98.832	ENSGGOG00000005989	DDX39B	100	98.832	Gorilla_gorilla
ENSPTIG00000017669	DDX39B	100	98.364	ENSHGLG00000019248	DDX39B	100	98.364	Heterocephalus_glaber_female
ENSPTIG00000017669	DDX39B	100	98.364	ENSHGLG00100011850	DDX39B	100	98.364	Heterocephalus_glaber_male
ENSPTIG00000017669	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.514	Ictalurus_punctatus
ENSPTIG00000017669	DDX39B	100	98.364	ENSSTOG00000012838	DDX39B	100	98.364	Ictidomys_tridecemlineatus
ENSPTIG00000017669	DDX39B	100	98.131	ENSJJAG00000005660	-	100	98.131	Jaculus_jaculus
ENSPTIG00000017669	DDX39B	66	78.723	ENSLBEG00000017177	-	81	78.723	Labrus_bergylta
ENSPTIG00000017669	DDX39B	99	78.014	ENSLBEG00000012254	ddx39b	99	78.014	Labrus_bergylta
ENSPTIG00000017669	DDX39B	100	88.710	ENSLACG00000002110	DDX39B	100	88.710	Latimeria_chalumnae
ENSPTIG00000017669	DDX39B	100	98.598	ENSLAFG00000014202	DDX39B	100	98.598	Loxodonta_africana
ENSPTIG00000017669	DDX39B	100	98.832	ENSMFAG00000034233	DDX39B	100	98.832	Macaca_fascicularis
ENSPTIG00000017669	DDX39B	100	98.832	ENSMMUG00000008839	DDX39B	100	98.832	Macaca_mulatta
ENSPTIG00000017669	DDX39B	100	98.832	ENSMNEG00000041059	DDX39B	100	98.832	Macaca_nemestrina
ENSPTIG00000017669	DDX39B	100	98.832	ENSMLEG00000043791	DDX39B	100	98.832	Mandrillus_leucophaeus
ENSPTIG00000017669	DDX39B	99	89.631	ENSMZEG00005017654	ddx39b	99	89.631	Maylandia_zebra
ENSPTIG00000017669	DDX39B	100	98.131	ENSMAUG00000008059	Ddx39b	100	98.131	Mesocricetus_auratus
ENSPTIG00000017669	DDX39B	100	98.832	ENSMICG00000017349	DDX39B	100	98.832	Microcebus_murinus
ENSPTIG00000017669	DDX39B	100	98.364	ENSMOCG00000011169	Ddx39b	100	98.364	Microtus_ochrogaster
ENSPTIG00000017669	DDX39B	88	98.404	ENSMODG00000015791	DDX39B	88	98.404	Monodelphis_domestica
ENSPTIG00000017669	DDX39B	100	98.598	ENSMUSG00000019432	Ddx39b	100	99.324	Mus_musculus
ENSPTIG00000017669	DDX39B	100	98.598	MGP_PahariEiJ_G0020513	Ddx39b	100	99.324	Mus_pahari
ENSPTIG00000017669	DDX39B	100	98.598	MGP_SPRETEiJ_G0022424	Ddx39b	100	98.598	Mus_spretus
ENSPTIG00000017669	DDX39B	100	99.065	ENSMPUG00000011407	DDX39B	100	99.065	Mustela_putorius_furo
ENSPTIG00000017669	DDX39B	73	99.678	ENSMLUG00000001681	DDX39B	100	99.678	Myotis_lucifugus
ENSPTIG00000017669	DDX39B	100	98.832	ENSNGAG00000022948	Ddx39b	100	98.832	Nannospalax_galili
ENSPTIG00000017669	DDX39B	100	74.299	ENSNLEG00000006094	DDX39B	100	74.299	Nomascus_leucogenys
ENSPTIG00000017669	DDX39B	86	99.550	ENSMEUG00000008264	DDX39B	86	99.550	Notamacropus_eugenii
ENSPTIG00000017669	DDX39B	100	99.065	ENSOPRG00000011923	DDX39B	100	99.065	Ochotona_princeps
ENSPTIG00000017669	DDX39B	100	98.364	ENSODEG00000018083	DDX39B	100	98.364	Octodon_degus
ENSPTIG00000017669	DDX39B	100	90.741	ENSONIG00000004740	ddx39b	100	91.204	Oreochromis_niloticus
ENSPTIG00000017669	DDX39B	55	97.046	ENSOANG00000008361	DDX39B	95	97.046	Ornithorhynchus_anatinus
ENSPTIG00000017669	DDX39B	100	95.485	ENSOCUG00000024126	DDX39B	100	95.485	Oryctolagus_cuniculus
ENSPTIG00000017669	DDX39B	84	91.444	ENSOGAG00000009067	-	100	98.148	Otolemur_garnettii
ENSPTIG00000017669	DDX39B	100	97.902	ENSOGAG00000028850	-	100	97.902	Otolemur_garnettii
ENSPTIG00000017669	DDX39B	100	98.598	ENSOARG00000008787	DDX39B	98	98.598	Ovis_aries
ENSPTIG00000017669	DDX39B	100	98.832	ENSPPAG00000043072	DDX39B	100	98.832	Pan_paniscus
ENSPTIG00000017669	DDX39B	100	99.065	ENSPPRG00000001913	DDX39B	100	99.065	Panthera_pardus
ENSPTIG00000017669	DDX39B	100	98.832	ENSPTRG00000032509	DDX39B	100	98.832	Pan_troglodytes
ENSPTIG00000017669	DDX39B	100	98.832	ENSPANG00000018609	DDX39B	100	98.832	Papio_anubis
ENSPTIG00000017669	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSPTIG00000017669	DDX39B	100	98.364	ENSPEMG00000016905	Ddx39b	100	98.364	Peromyscus_maniculatus_bairdii
ENSPTIG00000017669	DDX39B	100	98.832	ENSPCIG00000017572	DDX39B	100	98.832	Phascolarctos_cinereus
ENSPTIG00000017669	DDX39B	100	98.832	ENSPPYG00000016433	DDX39B	100	98.832	Pongo_abelii
ENSPTIG00000017669	DDX39B	66	99.296	ENSPCAG00000003484	DDX39B	100	99.296	Procavia_capensis
ENSPTIG00000017669	DDX39B	100	98.832	ENSPCOG00000018656	DDX39B	100	98.832	Propithecus_coquereli
ENSPTIG00000017669	DDX39B	100	98.364	ENSPVAG00000004653	DDX39B	100	98.364	Pteropus_vampyrus
ENSPTIG00000017669	DDX39B	98	81.604	ENSPNYG00000010382	ddx39b	98	81.776	Pundamilia_nyererei
ENSPTIG00000017669	DDX39B	100	91.743	ENSPNAG00000026926	ddx39b	100	91.743	Pygocentrus_nattereri
ENSPTIG00000017669	DDX39B	100	98.598	ENSRNOG00000000841	Ddx39b	100	98.598	Rattus_norvegicus
ENSPTIG00000017669	DDX39B	100	88.551	ENSRBIG00000031309	DDX39B	100	88.551	Rhinopithecus_bieti
ENSPTIG00000017669	DDX39B	100	98.832	ENSRROG00000039517	DDX39B	100	98.832	Rhinopithecus_roxellana
ENSPTIG00000017669	DDX39B	100	88.551	ENSSBOG00000035513	-	100	88.551	Saimiri_boliviensis_boliviensis
ENSPTIG00000017669	DDX39B	100	98.832	ENSSHAG00000003209	DDX39B	100	98.832	Sarcophilus_harrisii
ENSPTIG00000017669	DDX39B	100	90.389	ENSSFOG00015016107	ddx39b	100	90.847	Scleropages_formosus
ENSPTIG00000017669	DDX39B	100	92.593	ENSSDUG00000011557	ddx39b	100	92.824	Seriola_dumerili
ENSPTIG00000017669	DDX39B	100	92.361	ENSSLDG00000015763	ddx39b	100	92.593	Seriola_lalandi_dorsalis
ENSPTIG00000017669	DDX39B	87	86.898	ENSSARG00000005245	DDX39B	100	86.898	Sorex_araneus
ENSPTIG00000017669	DDX39B	100	96.729	ENSSPUG00000012805	DDX39B	100	96.729	Sphenodon_punctatus
ENSPTIG00000017669	DDX39B	100	98.832	ENSSSCG00000001400	DDX39B	100	99.711	Sus_scrofa
ENSPTIG00000017669	DDX39B	100	75.935	ENSTBEG00000003721	DDX39B	100	75.935	Tupaia_belangeri
ENSPTIG00000017669	DDX39B	100	90.300	ENSTTRG00000014074	DDX39B	100	90.300	Tursiops_truncatus
ENSPTIG00000017669	DDX39B	100	86.279	ENSUAMG00000027335	DDX39B	100	86.279	Ursus_americanus
ENSPTIG00000017669	DDX39B	100	90.421	ENSUMAG00000015124	DDX39B	100	90.421	Ursus_maritimus
ENSPTIG00000017669	DDX39B	61	96.460	ENSVPAG00000009167	-	74	96.460	Vicugna_pacos
ENSPTIG00000017669	DDX39B	100	98.832	ENSVVUG00000019518	DDX39B	99	98.832	Vulpes_vulpes
ENSPTIG00000017669	DDX39B	100	83.488	ENSXETG00000002498	ddx39b	99	83.488	Xenopus_tropicalis