EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000017701 (Gene tree)
Gene ID: 102964427
Gene Symbol: EXOSC1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 7124 bases
Position: chrKE721730.1:3886244-3893367
Accession: 102964427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020136	EXOSC1	PF10447.9	5e-15	1	1
ENSPTIP00000020146	EXOSC1	PF10447.9	1.6e-13	1	1
ENSPTIP00000020160	ECR1_N	PF14382.6	3.5e-09	1	1
ENSPTIP00000020146	ECR1_N	PF14382.6	4.2e-09	1	1
ENSPTIP00000020136	ECR1_N	PF14382.6	5.2e-09	1	1
ENSPTIP00000020152	ECR1_N	PF14382.6	5.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024481	EXOSC1-202	726	XM_015536669	ENSPTIP00000020146	170 (aa)	XP_015392155	UPI00005A4E7A
ENSPTIT00000024471	EXOSC1-201	801	XM_007080131	ENSPTIP00000020136	195 (aa)	XP_007080193	UPI0001C0D7AD
ENSPTIT00000024487	EXOSC1-203	537	-	ENSPTIP00000020152	178 (aa)	-	UPI000DE7D152
ENSPTIT00000024495	EXOSC1-204	420	-	ENSPTIP00000020160	140 (aa)	-	UPI000DE7E05D

Gene Model

Click here to download ENSPTIG00000017701's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017701's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017701	EXOSC1	100	98.235	ENSG00000171311	EXOSC1	100	98.235	Homo_sapiens
ENSPTIG00000017701	EXOSC1	98	80.628	ENSAPOG00000007822	exosc1	98	80.628	Acanthochromis_polyacanthus
ENSPTIG00000017701	EXOSC1	100	100.000	ENSAMEG00000000129	EXOSC1	100	100.000	Ailuropoda_melanoleuca
ENSPTIG00000017701	EXOSC1	96	80.319	ENSACIG00000018956	exosc1	92	80.319	Amphilophus_citrinellus
ENSPTIG00000017701	EXOSC1	98	80.628	ENSAOCG00000010699	exosc1	98	80.628	Amphiprion_ocellaris
ENSPTIG00000017701	EXOSC1	91	79.012	ENSAPEG00000012690	exosc1	96	79.012	Amphiprion_percula
ENSPTIG00000017701	EXOSC1	98	80.105	ENSATEG00000018683	exosc1	98	80.105	Anabas_testudineus
ENSPTIG00000017701	EXOSC1	99	86.010	ENSACAG00000002101	EXOSC1	99	86.010	Anolis_carolinensis
ENSPTIG00000017701	EXOSC1	100	99.412	ENSANAG00000034669	EXOSC1	100	99.412	Aotus_nancymaae
ENSPTIG00000017701	EXOSC1	98	80.628	ENSACLG00000021243	exosc1	98	80.628	Astatotilapia_calliptera
ENSPTIG00000017701	EXOSC1	98	82.199	ENSAMXG00000011116	exosc1	98	82.199	Astyanax_mexicanus
ENSPTIG00000017701	EXOSC1	100	99.487	ENSBTAG00000012699	EXOSC1	100	99.487	Bos_taurus
ENSPTIG00000017701	EXOSC1	92	33.511	WBGene00012966	exos-1	90	33.511	Caenorhabditis_elegans
ENSPTIG00000017701	EXOSC1	100	98.824	ENSCJAG00000016586	EXOSC1	100	98.824	Callithrix_jacchus
ENSPTIG00000017701	EXOSC1	100	99.487	ENSCAFG00000009068	EXOSC1	94	99.487	Canis_familiaris
ENSPTIG00000017701	EXOSC1	100	99.487	ENSCAFG00020006002	EXOSC1	94	99.487	Canis_lupus_dingo
ENSPTIG00000017701	EXOSC1	100	99.487	ENSCHIG00000015253	EXOSC1	100	99.487	Capra_hircus
ENSPTIG00000017701	EXOSC1	100	98.824	ENSTSYG00000000760	EXOSC1	100	98.824	Carlito_syrichta
ENSPTIG00000017701	EXOSC1	100	98.462	ENSCPOG00000001173	EXOSC1	100	98.462	Cavia_porcellus
ENSPTIG00000017701	EXOSC1	100	62.353	ENSCCAG00000023986	EXOSC1	100	62.353	Cebus_capucinus
ENSPTIG00000017701	EXOSC1	100	98.235	ENSCATG00000034114	EXOSC1	100	98.235	Cercocebus_atys
ENSPTIG00000017701	EXOSC1	100	98.974	ENSCLAG00000002463	EXOSC1	100	98.974	Chinchilla_lanigera
ENSPTIG00000017701	EXOSC1	100	96.923	ENSCSAG00000005870	EXOSC1	100	96.923	Chlorocebus_sabaeus
ENSPTIG00000017701	EXOSC1	96	84.492	ENSCHOG00000006477	EXOSC1	100	84.492	Choloepus_hoffmanni
ENSPTIG00000017701	EXOSC1	79	80.180	ENSCPBG00000011949	EXOSC1	92	80.180	Chrysemys_picta_bellii
ENSPTIG00000017701	EXOSC1	95	56.684	ENSCING00000022734	-	89	56.684	Ciona_intestinalis
ENSPTIG00000017701	EXOSC1	95	58.289	ENSCSAVG00000010865	-	95	58.289	Ciona_savignyi
ENSPTIG00000017701	EXOSC1	100	98.235	ENSCANG00000034159	EXOSC1	100	98.235	Colobus_angolensis_palliatus
ENSPTIG00000017701	EXOSC1	100	97.436	ENSCGRG00001000335	Exosc1	100	97.436	Cricetulus_griseus_chok1gshd
ENSPTIG00000017701	EXOSC1	100	97.436	ENSCGRG00000011602	Exosc1	100	97.436	Cricetulus_griseus_crigri
ENSPTIG00000017701	EXOSC1	98	77.711	ENSCSEG00000007895	exosc1	95	77.711	Cynoglossus_semilaevis
ENSPTIG00000017701	EXOSC1	98	76.963	ENSCVAG00000016748	exosc1	98	76.963	Cyprinodon_variegatus
ENSPTIG00000017701	EXOSC1	98	81.152	ENSDARG00000059841	exosc1	98	81.152	Danio_rerio
ENSPTIG00000017701	EXOSC1	85	95.833	ENSDNOG00000007983	EXOSC1	100	98.649	Dasypus_novemcinctus
ENSPTIG00000017701	EXOSC1	100	97.949	ENSDORG00000016528	Exosc1	100	97.949	Dipodomys_ordii
ENSPTIG00000017701	EXOSC1	94	48.148	FBgn0032346	Csl4	92	48.148	Drosophila_melanogaster
ENSPTIG00000017701	EXOSC1	100	95.897	ENSETEG00000002469	-	100	95.897	Echinops_telfairi
ENSPTIG00000017701	EXOSC1	99	62.755	ENSEBUG00000008164	exosc1	98	62.755	Eptatretus_burgeri
ENSPTIG00000017701	EXOSC1	100	89.894	ENSEASG00005008684	EXOSC1	100	89.894	Equus_asinus_asinus
ENSPTIG00000017701	EXOSC1	100	82.143	ENSECAG00000010621	EXOSC1	85	82.143	Equus_caballus
ENSPTIG00000017701	EXOSC1	100	97.949	ENSEEUG00000005647	EXOSC1	100	97.949	Erinaceus_europaeus
ENSPTIG00000017701	EXOSC1	94	81.522	ENSELUG00000017369	exosc1	97	72.455	Esox_lucius
ENSPTIG00000017701	EXOSC1	100	100.000	ENSFCAG00000040563	EXOSC1	100	100.000	Felis_catus
ENSPTIG00000017701	EXOSC1	100	83.077	ENSFALG00000008450	EXOSC1	100	83.077	Ficedula_albicollis
ENSPTIG00000017701	EXOSC1	100	98.974	ENSFDAG00000000846	EXOSC1	100	98.974	Fukomys_damarensis
ENSPTIG00000017701	EXOSC1	98	76.963	ENSFHEG00000009154	exosc1	98	76.963	Fundulus_heteroclitus
ENSPTIG00000017701	EXOSC1	98	80.628	ENSGMOG00000008993	exosc1	98	80.628	Gadus_morhua
ENSPTIG00000017701	EXOSC1	100	83.529	ENSGALG00000039917	EXOSC1	100	86.301	Gallus_gallus
ENSPTIG00000017701	EXOSC1	98	76.963	ENSGAFG00000010265	exosc1	94	76.963	Gambusia_affinis
ENSPTIG00000017701	EXOSC1	98	80.628	ENSGACG00000018936	exosc1	98	80.628	Gasterosteus_aculeatus
ENSPTIG00000017701	EXOSC1	100	84.615	ENSGAGG00000019192	EXOSC1	100	84.615	Gopherus_agassizii
ENSPTIG00000017701	EXOSC1	100	97.647	ENSGGOG00000003099	EXOSC1	100	97.647	Gorilla_gorilla
ENSPTIG00000017701	EXOSC1	98	80.628	ENSHBUG00000017857	exosc1	98	80.628	Haplochromis_burtoni
ENSPTIG00000017701	EXOSC1	100	98.462	ENSHGLG00000016927	EXOSC1	100	98.462	Heterocephalus_glaber_female
ENSPTIG00000017701	EXOSC1	100	98.462	ENSHGLG00100012208	EXOSC1	100	98.462	Heterocephalus_glaber_male
ENSPTIG00000017701	EXOSC1	98	79.581	ENSHCOG00000019882	exosc1	98	79.581	Hippocampus_comes
ENSPTIG00000017701	EXOSC1	98	81.152	ENSIPUG00000007685	exosc1	98	81.152	Ictalurus_punctatus
ENSPTIG00000017701	EXOSC1	100	98.974	ENSSTOG00000006615	EXOSC1	100	98.974	Ictidomys_tridecemlineatus
ENSPTIG00000017701	EXOSC1	87	84.553	ENSSTOG00000029860	-	94	84.553	Ictidomys_tridecemlineatus
ENSPTIG00000017701	EXOSC1	100	98.974	ENSJJAG00000013311	Exosc1	100	98.974	Jaculus_jaculus
ENSPTIG00000017701	EXOSC1	98	78.646	ENSKMAG00000001202	exosc1	81	78.646	Kryptolebias_marmoratus
ENSPTIG00000017701	EXOSC1	98	80.105	ENSLBEG00000011448	exosc1	98	80.105	Labrus_bergylta
ENSPTIG00000017701	EXOSC1	98	61.143	ENSLOCG00000003776	exosc1	98	61.143	Lepisosteus_oculatus
ENSPTIG00000017701	EXOSC1	100	97.949	ENSLAFG00000015983	EXOSC1	100	97.949	Loxodonta_africana
ENSPTIG00000017701	EXOSC1	100	98.235	ENSMFAG00000001493	EXOSC1	100	98.235	Macaca_fascicularis
ENSPTIG00000017701	EXOSC1	100	98.235	ENSMMUG00000020028	EXOSC1	100	98.235	Macaca_mulatta
ENSPTIG00000017701	EXOSC1	100	98.235	ENSMNEG00000029816	EXOSC1	100	98.235	Macaca_nemestrina
ENSPTIG00000017701	EXOSC1	100	91.795	ENSMLEG00000027643	EXOSC1	100	91.795	Mandrillus_leucophaeus
ENSPTIG00000017701	EXOSC1	98	81.152	ENSMAMG00000012200	exosc1	98	81.152	Mastacembelus_armatus
ENSPTIG00000017701	EXOSC1	98	80.628	ENSMZEG00005007042	exosc1	98	80.628	Maylandia_zebra
ENSPTIG00000017701	EXOSC1	100	98.235	ENSMAUG00000020462	-	100	98.235	Mesocricetus_auratus
ENSPTIG00000017701	EXOSC1	100	98.824	ENSMICG00000007664	EXOSC1	100	98.824	Microcebus_murinus
ENSPTIG00000017701	EXOSC1	100	97.436	ENSMOCG00000006004	-	100	97.436	Microtus_ochrogaster
ENSPTIG00000017701	EXOSC1	97	91.053	ENSMOCG00000017124	-	97	91.053	Microtus_ochrogaster
ENSPTIG00000017701	EXOSC1	99	61.236	ENSMMOG00000021403	exosc1	99	61.236	Mola_mola
ENSPTIG00000017701	EXOSC1	100	92.347	ENSMODG00000004213	EXOSC1	100	92.347	Monodelphis_domestica
ENSPTIG00000017701	EXOSC1	94	81.522	ENSMALG00000007061	exosc1	92	81.522	Monopterus_albus
ENSPTIG00000017701	EXOSC1	100	96.923	MGP_CAROLIEiJ_G0022959	Exosc1	100	96.923	Mus_caroli
ENSPTIG00000017701	EXOSC1	100	96.410	ENSMUSG00000034321	Exosc1	100	96.410	Mus_musculus
ENSPTIG00000017701	EXOSC1	100	97.436	MGP_PahariEiJ_G0014449	Exosc1	100	97.436	Mus_pahari
ENSPTIG00000017701	EXOSC1	100	96.923	MGP_SPRETEiJ_G0023880	Exosc1	100	96.923	Mus_spretus
ENSPTIG00000017701	EXOSC1	100	100.000	ENSMPUG00000017044	EXOSC1	100	100.000	Mustela_putorius_furo
ENSPTIG00000017701	EXOSC1	100	98.462	ENSMLUG00000009228	EXOSC1	100	98.462	Myotis_lucifugus
ENSPTIG00000017701	EXOSC1	100	96.410	ENSNGAG00000022033	Exosc1	100	96.410	Nannospalax_galili
ENSPTIG00000017701	EXOSC1	98	61.714	ENSNBRG00000024007	exosc1	97	61.714	Neolamprologus_brichardi
ENSPTIG00000017701	EXOSC1	100	97.647	ENSNLEG00000013872	EXOSC1	100	97.647	Nomascus_leucogenys
ENSPTIG00000017701	EXOSC1	82	90.435	ENSMEUG00000002246	EXOSC1	100	90.435	Notamacropus_eugenii
ENSPTIG00000017701	EXOSC1	100	96.923	ENSOPRG00000005065	EXOSC1	100	96.923	Ochotona_princeps
ENSPTIG00000017701	EXOSC1	100	98.462	ENSODEG00000016709	EXOSC1	100	98.462	Octodon_degus
ENSPTIG00000017701	EXOSC1	98	80.628	ENSONIG00000017683	exosc1	98	80.628	Oreochromis_niloticus
ENSPTIG00000017701	EXOSC1	68	93.913	ENSOANG00000006563	EXOSC1	100	91.270	Ornithorhynchus_anatinus
ENSPTIG00000017701	EXOSC1	100	97.449	ENSOCUG00000011898	-	100	97.449	Oryctolagus_cuniculus
ENSPTIG00000017701	EXOSC1	100	92.308	ENSOCUG00000026461	-	100	92.308	Oryctolagus_cuniculus
ENSPTIG00000017701	EXOSC1	98	79.167	ENSORLG00000011595	exosc1	98	79.167	Oryzias_latipes
ENSPTIG00000017701	EXOSC1	98	79.167	ENSORLG00020005831	exosc1	98	79.167	Oryzias_latipes_hni
ENSPTIG00000017701	EXOSC1	98	79.167	ENSORLG00015004317	exosc1	98	79.167	Oryzias_latipes_hsok
ENSPTIG00000017701	EXOSC1	98	63.874	ENSOMEG00000013907	exosc1	98	63.874	Oryzias_melastigma
ENSPTIG00000017701	EXOSC1	100	97.949	ENSOGAG00000016259	EXOSC1	100	97.949	Otolemur_garnettii
ENSPTIG00000017701	EXOSC1	100	98.974	ENSOARG00000010136	EXOSC1	100	98.974	Ovis_aries
ENSPTIG00000017701	EXOSC1	100	91.371	ENSPPAG00000039842	EXOSC1	100	91.371	Pan_paniscus
ENSPTIG00000017701	EXOSC1	100	100.000	ENSPPRG00000023366	EXOSC1	100	100.000	Panthera_pardus
ENSPTIG00000017701	EXOSC1	100	98.235	ENSPTRG00000002808	EXOSC1	100	98.235	Pan_troglodytes
ENSPTIG00000017701	EXOSC1	100	98.235	ENSPANG00000021324	EXOSC1	100	98.235	Papio_anubis
ENSPTIG00000017701	EXOSC1	98	81.675	ENSPKIG00000016037	exosc1	98	81.675	Paramormyrops_kingsleyae
ENSPTIG00000017701	EXOSC1	75	81.507	ENSPSIG00000013571	EXOSC1	98	81.818	Pelodiscus_sinensis
ENSPTIG00000017701	EXOSC1	98	77.711	ENSPMGG00000014002	exosc1	98	77.711	Periophthalmus_magnuspinnatus
ENSPTIG00000017701	EXOSC1	100	97.436	ENSPEMG00000010710	-	100	97.436	Peromyscus_maniculatus_bairdii
ENSPTIG00000017701	EXOSC1	95	71.123	ENSPMAG00000000195	exosc1	95	71.123	Petromyzon_marinus
ENSPTIG00000017701	EXOSC1	100	93.333	ENSPCIG00000002210	EXOSC1	99	93.333	Phascolarctos_cinereus
ENSPTIG00000017701	EXOSC1	98	76.440	ENSPFOG00000006755	exosc1	94	76.440	Poecilia_formosa
ENSPTIG00000017701	EXOSC1	98	76.440	ENSPLAG00000005880	exosc1	98	76.440	Poecilia_latipinna
ENSPTIG00000017701	EXOSC1	98	76.440	ENSPMEG00000015598	exosc1	94	76.440	Poecilia_mexicana
ENSPTIG00000017701	EXOSC1	98	74.699	ENSPREG00000000405	exosc1	93	74.699	Poecilia_reticulata
ENSPTIG00000017701	EXOSC1	100	96.923	ENSPPYG00000002531	EXOSC1	100	96.923	Pongo_abelii
ENSPTIG00000017701	EXOSC1	100	97.949	ENSPCAG00000009135	EXOSC1	100	97.949	Procavia_capensis
ENSPTIG00000017701	EXOSC1	100	92.308	ENSPCOG00000027539	EXOSC1	100	92.308	Propithecus_coquereli
ENSPTIG00000017701	EXOSC1	100	98.974	ENSPVAG00000003372	EXOSC1	100	98.974	Pteropus_vampyrus
ENSPTIG00000017701	EXOSC1	98	80.628	ENSPNYG00000021745	exosc1	98	80.628	Pundamilia_nyererei
ENSPTIG00000017701	EXOSC1	98	81.152	ENSPNAG00000001944	exosc1	98	81.152	Pygocentrus_nattereri
ENSPTIG00000017701	EXOSC1	100	97.436	ENSRNOG00000048708	Exosc1	100	97.436	Rattus_norvegicus
ENSPTIG00000017701	EXOSC1	100	98.235	ENSRBIG00000035618	EXOSC1	100	98.235	Rhinopithecus_bieti
ENSPTIG00000017701	EXOSC1	100	98.235	ENSRROG00000032589	EXOSC1	100	98.235	Rhinopithecus_roxellana
ENSPTIG00000017701	EXOSC1	100	99.412	ENSSBOG00000000359	EXOSC1	100	99.412	Saimiri_boliviensis_boliviensis
ENSPTIG00000017701	EXOSC1	75	95.918	ENSSHAG00000018219	EXOSC1	100	95.918	Sarcophilus_harrisii
ENSPTIG00000017701	EXOSC1	98	77.844	ENSSFOG00015016289	-	98	78.421	Scleropages_formosus
ENSPTIG00000017701	EXOSC1	98	83.246	ENSSFOG00015009069	exosc1	98	83.246	Scleropages_formosus
ENSPTIG00000017701	EXOSC1	98	81.152	ENSSMAG00000003721	exosc1	98	81.152	Scophthalmus_maximus
ENSPTIG00000017701	EXOSC1	98	81.152	ENSSDUG00000002993	exosc1	98	81.152	Seriola_dumerili
ENSPTIG00000017701	EXOSC1	98	81.152	ENSSLDG00000025181	exosc1	98	81.152	Seriola_lalandi_dorsalis
ENSPTIG00000017701	EXOSC1	100	84.615	ENSSARG00000000162	EXOSC1	100	84.615	Sorex_araneus
ENSPTIG00000017701	EXOSC1	99	82.990	ENSSPUG00000012263	EXOSC1	99	82.990	Sphenodon_punctatus
ENSPTIG00000017701	EXOSC1	98	79.310	ENSSPAG00000016792	exosc1	82	79.310	Stegastes_partitus
ENSPTIG00000017701	EXOSC1	100	98.974	ENSSSCG00000010518	EXOSC1	91	98.974	Sus_scrofa
ENSPTIG00000017701	EXOSC1	98	81.250	ENSTGUG00000009692	EXOSC1	99	81.250	Taeniopygia_guttata
ENSPTIG00000017701	EXOSC1	97	74.603	ENSTRUG00000007706	exosc1	98	74.603	Takifugu_rubripes
ENSPTIG00000017701	EXOSC1	97	74.479	ENSTNIG00000014079	exosc1	97	74.479	Tetraodon_nigroviridis
ENSPTIG00000017701	EXOSC1	100	90.256	ENSTBEG00000006011	EXOSC1	100	90.256	Tupaia_belangeri
ENSPTIG00000017701	EXOSC1	94	99.457	ENSTTRG00000009887	EXOSC1	100	99.457	Tursiops_truncatus
ENSPTIG00000017701	EXOSC1	100	83.077	ENSUAMG00000010266	EXOSC1	100	83.077	Ursus_americanus
ENSPTIG00000017701	EXOSC1	100	83.077	ENSUMAG00000022002	EXOSC1	100	83.077	Ursus_maritimus
ENSPTIG00000017701	EXOSC1	100	99.487	ENSVVUG00000023192	EXOSC1	63	99.487	Vulpes_vulpes
ENSPTIG00000017701	EXOSC1	98	79.167	ENSXETG00000003434	exosc1	99	79.167	Xenopus_tropicalis
ENSPTIG00000017701	EXOSC1	71	85.000	ENSXCOG00000014499	exosc1	92	85.000	Xiphophorus_couchianus
ENSPTIG00000017701	EXOSC1	98	74.850	ENSXMAG00000023382	exosc1	93	74.850	Xiphophorus_maculatus