EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000017799 (Gene tree)
Gene ID: 102961795
Gene Symbol: VARS2
Alias: -
Full Name: valyl-tRNA synthetase 2%2C mitochondrial
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 13185 bases
Position: chrKE721931.1:396005-409189
Accession: 102961795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020391	tRNA-synt_1g	PF09334.11	2.9e-15	1	1
ENSPTIP00000020418	tRNA-synt_1g	PF09334.11	3.9e-15	1	1
ENSPTIP00000020418	Anticodon_1	PF08264.13	7.3e-31	1	1
ENSPTIP00000020391	Anticodon_1	PF08264.13	7.4e-31	1	1
ENSPTIP00000020391	tRNA-synt_1	PF00133.22	1.5e-184	1	1
ENSPTIP00000020418	tRNA-synt_1	PF00133.22	1.1e-183	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024733	VARS2-201	5022	XM_007090584	ENSPTIP00000020391	1015 (aa)	XP_007090646	-
ENSPTIT00000024761	VARS2-202	3255	XM_007090583	ENSPTIP00000020418	1084 (aa)	XP_007090645	-

Gene Model

Click here to download ENSPTIG00000017799's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017799's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000017799	VARS2	87	54.139	ENSPTIG00000010462	VARS	82	52.280

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017799	VARS2	98	51.812	ENSAPOG00000007396	vars2	95	50.904	Acanthochromis_polyacanthus
ENSPTIG00000017799	VARS2	98	91.566	ENSAMEG00000012997	VARS2	100	89.103	Ailuropoda_melanoleuca
ENSPTIG00000017799	VARS2	96	52.794	ENSACIG00000004344	vars2	99	51.130	Amphilophus_citrinellus
ENSPTIG00000017799	VARS2	98	51.524	ENSAOCG00000000476	vars2	95	50.621	Amphiprion_ocellaris
ENSPTIG00000017799	VARS2	98	51.426	ENSAPEG00000008646	vars2	92	50.525	Amphiprion_percula
ENSPTIG00000017799	VARS2	93	54.223	ENSATEG00000012291	vars2	93	52.841	Anabas_testudineus
ENSPTIG00000017799	VARS2	96	60.222	ENSACAG00000022093	VARS2	97	58.627	Anolis_carolinensis
ENSPTIG00000017799	VARS2	98	87.651	ENSANAG00000038018	VARS2	99	86.428	Aotus_nancymaae
ENSPTIG00000017799	VARS2	96	52.438	ENSACLG00000018673	vars2	97	50.561	Astatotilapia_calliptera
ENSPTIG00000017799	VARS2	95	54.246	ENSAMXG00000017773	vars2	97	54.437	Astyanax_mexicanus
ENSPTIG00000017799	VARS2	97	89.170	ENSBTAG00000010698	VARS2	99	87.819	Bos_taurus
ENSPTIG00000017799	VARS2	98	87.702	ENSCJAG00000019826	VARS2	99	86.471	Callithrix_jacchus
ENSPTIG00000017799	VARS2	98	90.663	ENSCAFG00000000454	VARS2	100	89.077	Canis_familiaris
ENSPTIG00000017799	VARS2	91	86.486	ENSCAFG00020019387	VARS2	96	89.160	Canis_lupus_dingo
ENSPTIG00000017799	VARS2	97	89.170	ENSCHIG00000007847	VARS2	99	87.819	Capra_hircus
ENSPTIG00000017799	VARS2	98	87.601	ENSTSYG00000009904	VARS2	99	86.389	Carlito_syrichta
ENSPTIG00000017799	VARS2	92	83.136	ENSCAPG00000017770	VARS2	99	83.136	Cavia_aperea
ENSPTIG00000017799	VARS2	98	82.863	ENSCPOG00000021834	VARS2	99	81.544	Cavia_porcellus
ENSPTIG00000017799	VARS2	98	88.052	ENSCCAG00000037907	VARS2	99	86.711	Cebus_capucinus
ENSPTIG00000017799	VARS2	98	88.620	ENSCATG00000032554	VARS2	99	87.240	Cercocebus_atys
ENSPTIG00000017799	VARS2	98	83.518	ENSCLAG00000002889	VARS2	99	82.203	Chinchilla_lanigera
ENSPTIG00000017799	VARS2	98	88.620	ENSCSAG00000008327	VARS2	99	87.240	Chlorocebus_sabaeus
ENSPTIG00000017799	VARS2	95	63.131	ENSCPBG00000021502	VARS2	96	63.354	Chrysemys_picta_bellii
ENSPTIG00000017799	VARS2	98	88.218	ENSCANG00000014991	VARS2	99	86.761	Colobus_angolensis_palliatus
ENSPTIG00000017799	VARS2	98	83.635	ENSCGRG00001021535	Vars2	100	81.827	Cricetulus_griseus_chok1gshd
ENSPTIG00000017799	VARS2	98	83.635	ENSCGRG00000014112	Vars2	100	81.827	Cricetulus_griseus_crigri
ENSPTIG00000017799	VARS2	84	60.051	ENSCSEG00000015432	vars2	96	56.522	Cynoglossus_semilaevis
ENSPTIG00000017799	VARS2	68	52.617	ENSCVAG00000017765	vars2	98	52.758	Cyprinodon_variegatus
ENSPTIG00000017799	VARS2	96	53.568	ENSDARG00000056717	vars2	96	52.450	Danio_rerio
ENSPTIG00000017799	VARS2	83	86.207	ENSDORG00000008516	Vars2	93	86.499	Dipodomys_ordii
ENSPTIG00000017799	VARS2	98	77.296	ENSETEG00000014844	VARS2	99	75.875	Echinops_telfairi
ENSPTIG00000017799	VARS2	98	90.251	ENSEASG00005019997	VARS2	99	89.012	Equus_asinus_asinus
ENSPTIG00000017799	VARS2	98	91.859	ENSECAG00000018202	VARS2	99	90.858	Equus_caballus
ENSPTIG00000017799	VARS2	65	86.408	ENSEEUG00000012591	-	63	86.408	Erinaceus_europaeus
ENSPTIG00000017799	VARS2	97	51.359	ENSELUG00000017824	vars2	97	50.894	Esox_lucius
ENSPTIG00000017799	VARS2	98	98.494	ENSFCAG00000010531	VARS2	100	97.928	Felis_catus
ENSPTIG00000017799	VARS2	98	83.552	ENSFDAG00000017216	VARS2	99	82.514	Fukomys_damarensis
ENSPTIG00000017799	VARS2	88	52.567	ENSFHEG00000013932	vars2	96	49.144	Fundulus_heteroclitus
ENSPTIG00000017799	VARS2	93	55.671	ENSGMOG00000018960	vars2	99	55.671	Gadus_morhua
ENSPTIG00000017799	VARS2	84	50.882	ENSGAFG00000004737	vars2	88	51.008	Gambusia_affinis
ENSPTIG00000017799	VARS2	92	55.059	ENSGACG00000001464	vars2	99	53.753	Gasterosteus_aculeatus
ENSPTIG00000017799	VARS2	94	63.608	ENSGAGG00000011652	VARS2	98	63.608	Gopherus_agassizii
ENSPTIG00000017799	VARS2	98	87.915	ENSGGOG00000014587	VARS2	99	86.484	Gorilla_gorilla
ENSPTIG00000017799	VARS2	94	51.939	ENSHBUG00000002448	vars2	92	51.939	Haplochromis_burtoni
ENSPTIG00000017799	VARS2	98	82.814	ENSHGLG00000012886	VARS2	98	80.591	Heterocephalus_glaber_female
ENSPTIG00000017799	VARS2	98	82.613	ENSHGLG00100016535	VARS2	99	81.262	Heterocephalus_glaber_male
ENSPTIG00000017799	VARS2	68	52.833	ENSHCOG00000017907	vars2	94	52.833	Hippocampus_comes
ENSPTIG00000017799	VARS2	95	54.363	ENSIPUG00000015573	Vars2	96	53.098	Ictalurus_punctatus
ENSPTIG00000017799	VARS2	98	87.726	ENSSTOG00000009924	VARS2	99	86.698	Ictidomys_tridecemlineatus
ENSPTIG00000017799	VARS2	98	83.317	ENSJJAG00000011144	Vars2	99	82.136	Jaculus_jaculus
ENSPTIG00000017799	VARS2	97	52.348	ENSKMAG00000001393	vars2	96	51.616	Kryptolebias_marmoratus
ENSPTIG00000017799	VARS2	93	53.429	ENSLBEG00000011949	vars2	96	51.048	Labrus_bergylta
ENSPTIG00000017799	VARS2	55	63.784	ENSLBEG00000005480	-	81	63.768	Labrus_bergylta
ENSPTIG00000017799	VARS2	98	52.611	ENSLACG00000001576	-	99	52.524	Latimeria_chalumnae
ENSPTIG00000017799	VARS2	97	87.830	ENSLAFG00000015183	VARS2	99	86.243	Loxodonta_africana
ENSPTIG00000017799	VARS2	98	88.218	ENSMFAG00000042367	VARS2	99	86.767	Macaca_fascicularis
ENSPTIG00000017799	VARS2	98	88.318	ENSMMUG00000018609	VARS2	99	86.862	Macaca_mulatta
ENSPTIG00000017799	VARS2	98	88.520	ENSMNEG00000043163	VARS2	99	87.051	Macaca_nemestrina
ENSPTIG00000017799	VARS2	98	88.822	ENSMLEG00000041728	VARS2	99	86.385	Mandrillus_leucophaeus
ENSPTIG00000017799	VARS2	96	52.083	ENSMAMG00000020339	vars2	95	50.613	Mastacembelus_armatus
ENSPTIG00000017799	VARS2	96	52.338	ENSMZEG00005017669	vars2	97	50.467	Maylandia_zebra
ENSPTIG00000017799	VARS2	98	83.852	ENSMAUG00000018946	Vars2	100	82.220	Mesocricetus_auratus
ENSPTIG00000017799	VARS2	81	89.225	ENSMICG00000005365	VARS2	100	87.892	Microcebus_murinus
ENSPTIG00000017799	VARS2	92	85.771	ENSMOCG00000014607	Vars2	100	84.000	Microtus_ochrogaster
ENSPTIG00000017799	VARS2	97	52.100	ENSMMOG00000012122	vars2	98	50.715	Mola_mola
ENSPTIG00000017799	VARS2	97	77.644	ENSMODG00000015848	VARS2	99	75.589	Monodelphis_domestica
ENSPTIG00000017799	VARS2	96	52.711	ENSMALG00000009217	vars2	97	52.711	Monopterus_albus
ENSPTIG00000017799	VARS2	98	83.602	MGP_CAROLIEiJ_G0021529	Vars2	100	82.392	Mus_caroli
ENSPTIG00000017799	VARS2	98	83.199	ENSMUSG00000038838	Vars2	100	82.015	Mus_musculus
ENSPTIG00000017799	VARS2	98	83.903	MGP_PahariEiJ_G0020523	Vars2	100	82.768	Mus_pahari
ENSPTIG00000017799	VARS2	98	83.400	MGP_SPRETEiJ_G0022436	Vars2	100	82.203	Mus_spretus
ENSPTIG00000017799	VARS2	98	92.169	ENSMPUG00000011643	VARS2	100	90.866	Mustela_putorius_furo
ENSPTIG00000017799	VARS2	98	85.473	ENSMLUG00000002356	VARS2	99	82.790	Myotis_lucifugus
ENSPTIG00000017799	VARS2	95	79.609	ENSNGAG00000020607	Vars2	100	75.587	Nannospalax_galili
ENSPTIG00000017799	VARS2	67	51.105	ENSNBRG00000001624	vars2	60	51.381	Neolamprologus_brichardi
ENSPTIG00000017799	VARS2	98	84.839	ENSNLEG00000005625	VARS2	99	82.629	Nomascus_leucogenys
ENSPTIG00000017799	VARS2	82	75.125	ENSMEUG00000014475	VARS2	89	75.548	Notamacropus_eugenii
ENSPTIG00000017799	VARS2	87	84.906	ENSOPRG00000000682	VARS2	89	80.636	Ochotona_princeps
ENSPTIG00000017799	VARS2	98	81.910	ENSODEG00000017965	VARS2	99	80.414	Octodon_degus
ENSPTIG00000017799	VARS2	70	56.542	ENSONIG00000004734	vars2	72	56.542	Oreochromis_niloticus
ENSPTIG00000017799	VARS2	86	62.025	ENSOANG00000000398	-	99	62.025	Ornithorhynchus_anatinus
ENSPTIG00000017799	VARS2	98	79.703	ENSOCUG00000021496	VARS2	65	77.972	Oryctolagus_cuniculus
ENSPTIG00000017799	VARS2	97	52.433	ENSORLG00000010632	vars2	95	51.132	Oryzias_latipes
ENSPTIG00000017799	VARS2	97	52.362	ENSORLG00020018584	vars2	96	51.076	Oryzias_latipes_hni
ENSPTIG00000017799	VARS2	97	52.404	ENSORLG00015010408	vars2	94	51.429	Oryzias_latipes_hsok
ENSPTIG00000017799	VARS2	97	52.465	ENSOMEG00000008360	vars2	97	51.126	Oryzias_melastigma
ENSPTIG00000017799	VARS2	98	87.337	ENSOGAG00000006087	VARS2	99	85.060	Otolemur_garnettii
ENSPTIG00000017799	VARS2	97	88.372	ENSOARG00000010844	VARS2	99	86.798	Ovis_aries
ENSPTIG00000017799	VARS2	98	87.915	ENSPPAG00000041141	VARS2	99	86.578	Pan_paniscus
ENSPTIG00000017799	VARS2	100	99.815	ENSPPRG00000006751	VARS2	100	99.815	Panthera_pardus
ENSPTIG00000017799	VARS2	98	87.915	ENSPTRG00000034497	VARS2	99	86.578	Pan_troglodytes
ENSPTIG00000017799	VARS2	98	88.721	ENSPANG00000018481	VARS2	100	87.306	Papio_anubis
ENSPTIG00000017799	VARS2	96	54.783	ENSPKIG00000011372	vars2	97	53.794	Paramormyrops_kingsleyae
ENSPTIG00000017799	VARS2	62	68.621	ENSPSIG00000006206	VARS2	92	68.056	Pelodiscus_sinensis
ENSPTIG00000017799	VARS2	96	53.755	ENSPMGG00000000465	vars2	98	52.408	Periophthalmus_magnuspinnatus
ENSPTIG00000017799	VARS2	98	83.635	ENSPEMG00000014691	Vars2	100	82.203	Peromyscus_maniculatus_bairdii
ENSPTIG00000017799	VARS2	98	79.697	ENSPCIG00000015040	VARS2	99	77.557	Phascolarctos_cinereus
ENSPTIG00000017799	VARS2	97	51.980	ENSPFOG00000017616	vars2	97	50.999	Poecilia_formosa
ENSPTIG00000017799	VARS2	97	51.629	ENSPLAG00000019778	vars2	99	49.815	Poecilia_latipinna
ENSPTIG00000017799	VARS2	97	51.728	ENSPMEG00000011123	vars2	97	50.809	Poecilia_mexicana
ENSPTIG00000017799	VARS2	93	47.497	ENSPREG00000014998	vars2	95	46.844	Poecilia_reticulata
ENSPTIG00000017799	VARS2	98	88.396	ENSPPYG00000016424	VARS2	99	87.027	Pongo_abelii
ENSPTIG00000017799	VARS2	81	83.051	ENSPCAG00000006946	VARS2	84	80.838	Procavia_capensis
ENSPTIG00000017799	VARS2	98	86.974	ENSPCOG00000014839	VARS2	99	85.060	Propithecus_coquereli
ENSPTIG00000017799	VARS2	98	89.023	ENSPVAG00000004197	VARS2	99	87.158	Pteropus_vampyrus
ENSPTIG00000017799	VARS2	86	59.511	ENSPNYG00000010314	vars2	97	59.511	Pundamilia_nyererei
ENSPTIG00000017799	VARS2	95	55.055	ENSPNAG00000026793	vars2	97	53.377	Pygocentrus_nattereri
ENSPTIG00000017799	VARS2	98	83.534	ENSRNOG00000000833	Vars2	100	82.486	Rattus_norvegicus
ENSPTIG00000017799	VARS2	98	88.117	ENSRBIG00000032725	VARS2	99	86.767	Rhinopithecus_bieti
ENSPTIG00000017799	VARS2	98	88.419	ENSRROG00000043847	VARS2	99	87.051	Rhinopithecus_roxellana
ENSPTIG00000017799	VARS2	98	85.462	ENSSBOG00000033240	VARS2	99	83.333	Saimiri_boliviensis_boliviensis
ENSPTIG00000017799	VARS2	97	78.702	ENSSHAG00000009307	VARS2	100	76.326	Sarcophilus_harrisii
ENSPTIG00000017799	VARS2	96	54.807	ENSSFOG00015016187	vars2	98	52.941	Scleropages_formosus
ENSPTIG00000017799	VARS2	97	53.320	ENSSMAG00000020842	vars2	97	52.436	Scophthalmus_maximus
ENSPTIG00000017799	VARS2	97	52.830	ENSSDUG00000011598	vars2	95	52.141	Seriola_dumerili
ENSPTIG00000017799	VARS2	95	53.498	ENSSLDG00000015492	vars2	95	51.390	Seriola_lalandi_dorsalis
ENSPTIG00000017799	VARS2	60	90.511	ENSSARG00000003786	-	69	90.511	Sorex_araneus
ENSPTIG00000017799	VARS2	92	60.085	ENSSPUG00000014700	VARS2	94	60.473	Sphenodon_punctatus
ENSPTIG00000017799	VARS2	97	50.100	ENSSPAG00000004654	vars2	96	48.577	Stegastes_partitus
ENSPTIG00000017799	VARS2	98	89.157	ENSSSCG00000001384	VARS2	100	87.853	Sus_scrofa
ENSPTIG00000017799	VARS2	93	55.100	ENSTRUG00000005264	vars2	94	53.769	Takifugu_rubripes
ENSPTIG00000017799	VARS2	96	52.864	ENSTNIG00000005916	vars2	99	50.889	Tetraodon_nigroviridis
ENSPTIG00000017799	VARS2	50	89.552	ENSTBEG00000007976	-	53	89.552	Tupaia_belangeri
ENSPTIG00000017799	VARS2	93	84.375	ENSTTRG00000012243	VARS2	94	84.375	Tursiops_truncatus
ENSPTIG00000017799	VARS2	98	90.572	ENSUAMG00000026124	VARS2	100	91.215	Ursus_americanus
ENSPTIG00000017799	VARS2	98	91.667	ENSUMAG00000019894	VARS2	100	90.584	Ursus_maritimus
ENSPTIG00000017799	VARS2	98	91.466	ENSVVUG00000010754	VARS2	97	88.511	Vulpes_vulpes
ENSPTIG00000017799	VARS2	93	55.867	ENSXETG00000003036	vars2	99	55.867	Xenopus_tropicalis
ENSPTIG00000017799	VARS2	95	52.840	ENSXCOG00000003455	vars2	97	51.961	Xiphophorus_couchianus
ENSPTIG00000017799	VARS2	97	51.619	ENSXMAG00000013523	vars2	97	50.615	Xiphophorus_maculatus