EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPTIG00000017842 (Gene tree)
Gene ID: 102952094
Gene Symbol: -
Alias: -
Full Name: DEAD-box helicase 43
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 15613 bases
Position: chrKE721922.1:5510909-5526521
Accession: 102952094
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020354	KH_1	PF00013.29	5.2e-11	1	1
ENSPTIP00000020354	DEAD	PF00270.29	4.5e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000024695	-	1944	XM_007090110	ENSPTIP00000020354	647 (aa)	XP_007090172	UPI00042BF876

Gene Model

Click here to download ENSPTIG00000017842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000017842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPTIG00000017842	-	57	39.378	ENSPTIG00000014814	DDX3X	62	38.945
ENSPTIG00000017842	-	53	36.389	ENSPTIG00000004868	DDX18	52	36.389
ENSPTIG00000017842	-	68	43.527	ENSPTIG00000008733	DDX17	89	44.032
ENSPTIG00000017842	-	59	33.418	ENSPTIG00000011259	DDX49	80	33.418
ENSPTIG00000017842	-	68	33.409	ENSPTIG00000007021	DDX59	68	33.409
ENSPTIG00000017842	-	90	72.337	ENSPTIG00000001243	-	90	72.337
ENSPTIG00000017842	-	63	32.857	ENSPTIG00000013697	DDX52	71	32.857
ENSPTIG00000017842	-	64	37.176	ENSPTIG00000020225	DDX41	66	37.176
ENSPTIG00000017842	-	60	39.141	ENSPTIG00000007748	DDX4	67	38.265
ENSPTIG00000017842	-	55	32.964	ENSPTIG00000018551	DDX6	73	32.964
ENSPTIG00000017842	-	56	36.413	ENSPTIG00000011662	DDX27	51	32.075
ENSPTIG00000017842	-	53	33.524	ENSPTIG00000012373	-	85	33.524
ENSPTIG00000017842	-	68	43.848	ENSPTIG00000010353	DDX5	71	43.848
ENSPTIG00000017842	-	50	31.268	ENSPTIG00000011490	DDX55	56	31.268
ENSPTIG00000017842	-	56	32.877	ENSPTIG00000011207	EIF4A2	88	32.923
ENSPTIG00000017842	-	59	39.196	ENSPTIG00000016749	DDX3Y	60	39.196
ENSPTIG00000017842	-	54	35.097	ENSPTIG00000008454	DDX50	50	35.097
ENSPTIG00000017842	-	52	33.235	ENSPTIG00000009646	EIF4A3	91	33.235
ENSPTIG00000017842	-	56	30.633	ENSPTIG00000006444	DDX28	74	30.633
ENSPTIG00000017842	-	57	34.392	ENSPTIG00000019604	DDX47	81	34.392
ENSPTIG00000017842	-	62	40.826	ENSPTIG00000018873	DDX23	52	40.826

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000017842	-	99	85.538	ENSAMEG00000007851	-	100	85.538	Ailuropoda_melanoleuca
ENSPTIG00000017842	-	100	74.962	ENSBTAG00000021814	-	100	74.808	Bos_taurus
ENSPTIG00000017842	-	99	86.244	ENSCAFG00020010029	-	100	86.244	Canis_lupus_dingo
ENSPTIG00000017842	-	99	80.465	ENSCAFG00020002717	-	99	80.465	Canis_lupus_dingo
ENSPTIG00000017842	-	100	75.000	ENSCHIG00000017351	-	100	75.000	Capra_hircus
ENSPTIG00000017842	-	77	75.896	ENSCAPG00000004247	-	100	75.896	Cavia_aperea
ENSPTIG00000017842	-	99	79.907	ENSCPOG00000003991	-	100	79.907	Cavia_porcellus
ENSPTIG00000017842	-	99	73.457	ENSCLAG00000010261	-	100	73.457	Chinchilla_lanigera
ENSPTIG00000017842	-	60	76.923	ENSCHOG00000003450	-	69	76.923	Choloepus_hoffmanni
ENSPTIG00000017842	-	99	79.444	ENSCGRG00001001145	Ddx43	100	79.444	Cricetulus_griseus_chok1gshd
ENSPTIG00000017842	-	87	82.416	ENSCGRG00000010217	Ddx43	100	82.416	Cricetulus_griseus_crigri
ENSPTIG00000017842	-	100	80.645	ENSDNOG00000017589	-	100	80.645	Dasypus_novemcinctus
ENSPTIG00000017842	-	99	78.671	ENSDORG00000030010	Ddx43	100	79.444	Dipodomys_ordii
ENSPTIG00000017842	-	80	86.136	ENSETEG00000001887	-	81	86.136	Echinops_telfairi
ENSPTIG00000017842	-	99	79.784	ENSEASG00005004346	-	89	80.247	Equus_asinus_asinus
ENSPTIG00000017842	-	99	79.938	ENSECAG00000017971	DDX43	98	80.401	Equus_caballus
ENSPTIG00000017842	-	100	99.536	ENSFCAG00000031631	-	100	99.536	Felis_catus
ENSPTIG00000017842	-	87	80.639	ENSHGLG00000001118	-	100	80.639	Heterocephalus_glaber_female
ENSPTIG00000017842	-	96	77.120	ENSHGLG00100011895	-	99	76.741	Heterocephalus_glaber_male
ENSPTIG00000017842	-	87	71.936	ENSSTOG00000032538	-	100	71.936	Ictidomys_tridecemlineatus
ENSPTIG00000017842	-	99	78.516	ENSJJAG00000014184	Ddx43	100	78.516	Jaculus_jaculus
ENSPTIG00000017842	-	93	81.188	ENSLAFG00000012755	-	99	81.032	Loxodonta_africana
ENSPTIG00000017842	-	99	80.062	ENSMAUG00000001441	Ddx43	100	80.062	Mesocricetus_auratus
ENSPTIG00000017842	-	99	78.120	ENSMOCG00000012956	Ddx43	100	78.274	Microtus_ochrogaster
ENSPTIG00000017842	-	99	79.598	MGP_CAROLIEiJ_G0032467	Ddx43	100	79.598	Mus_caroli
ENSPTIG00000017842	-	99	79.907	ENSMUSG00000070291	Ddx43	100	79.907	Mus_musculus
ENSPTIG00000017842	-	91	84.722	MGP_PahariEiJ_G0015333	Ddx43	100	84.722	Mus_pahari
ENSPTIG00000017842	-	99	79.907	MGP_SPRETEiJ_G0033607	Ddx43	100	79.907	Mus_spretus
ENSPTIG00000017842	-	100	83.821	ENSMPUG00000004342	-	100	84.592	Mustela_putorius_furo
ENSPTIG00000017842	-	99	81.260	ENSMLUG00000017604	-	100	81.874	Myotis_lucifugus
ENSPTIG00000017842	-	99	79.444	ENSNGAG00000015102	Ddx43	100	79.444	Nannospalax_galili
ENSPTIG00000017842	-	74	81.250	ENSOPRG00000013523	-	86	81.250	Ochotona_princeps
ENSPTIG00000017842	-	84	79.742	ENSODEG00000016207	-	99	79.742	Octodon_degus
ENSPTIG00000017842	-	98	64.669	ENSOCUG00000025811	-	98	64.669	Oryctolagus_cuniculus
ENSPTIG00000017842	-	99	77.589	ENSOCUG00000006338	-	100	77.589	Oryctolagus_cuniculus
ENSPTIG00000017842	-	100	74.383	ENSOARG00000010873	-	100	74.383	Ovis_aries
ENSPTIG00000017842	-	87	83.304	ENSPEMG00000023986	Ddx43	100	83.304	Peromyscus_maniculatus_bairdii
ENSPTIG00000017842	-	99	77.245	ENSPCAG00000005962	-	99	77.399	Procavia_capensis
ENSPTIG00000017842	-	87	84.956	ENSPVAG00000012718	-	100	84.956	Pteropus_vampyrus
ENSPTIG00000017842	-	99	80.216	ENSRNOG00000050868	Ddx43	100	80.216	Rattus_norvegicus
ENSPTIG00000017842	-	84	82.847	ENSSARG00000013493	-	100	82.847	Sorex_araneus
ENSPTIG00000017842	-	100	76.235	ENSSSCG00000004287	-	100	77.006	Sus_scrofa
ENSPTIG00000017842	-	87	71.454	ENSTTRG00000001488	-	99	71.454	Tursiops_truncatus
ENSPTIG00000017842	-	83	83.272	ENSUAMG00000012894	-	83	83.272	Ursus_americanus
ENSPTIG00000017842	-	100	85.670	ENSUMAG00000012291	-	100	85.670	Ursus_maritimus
ENSPTIG00000017842	-	94	72.459	ENSVPAG00000004969	-	100	72.459	Vicugna_pacos
ENSPTIG00000017842	-	99	86.244	ENSVVUG00000013908	-	100	86.244	Vulpes_vulpes