EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000018274 (Gene tree)
Gene ID: 102954503
Gene Symbol: CMSS1
Alias: -
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Plus strand
Length: 380036 bases
Position: chrKE722195.1:5555304-5935339
Accession: 102954503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000020992	CMS1	PF14617.6	7e-33	1	1
ENSPTIP00000020992	DEAD	PF00270.29	1.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000025354	CMSS1-201	840	XM_007095955	ENSPTIP00000020992	279 (aa)	XP_007096017	UPI00042BB14F

Gene Model

Click here to download ENSPTIG00000018274's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018274's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018274	CMSS1	100	91.756	ENSG00000184220	CMSS1	99	95.062	Homo_sapiens
ENSPTIG00000018274	CMSS1	72	64.851	ENSAPOG00000010604	cmss1	81	64.500	Acanthochromis_polyacanthus
ENSPTIG00000018274	CMSS1	92	93.822	ENSAMEG00000004092	CMSS1	100	93.822	Ailuropoda_melanoleuca
ENSPTIG00000018274	CMSS1	72	54.950	ENSACIG00000021854	cmss1	91	51.653	Amphilophus_citrinellus
ENSPTIG00000018274	CMSS1	100	51.877	ENSAOCG00000013361	cmss1	100	53.633	Amphiprion_ocellaris
ENSPTIG00000018274	CMSS1	72	64.851	ENSAPEG00000005829	cmss1	100	54.639	Amphiprion_percula
ENSPTIG00000018274	CMSS1	100	54.325	ENSATEG00000008209	cmss1	100	54.452	Anabas_testudineus
ENSPTIG00000018274	CMSS1	82	69.130	ENSAPLG00000010542	CMSS1	100	69.130	Anas_platyrhynchos
ENSPTIG00000018274	CMSS1	92	64.015	ENSACAG00000011065	CMSS1	97	64.015	Anolis_carolinensis
ENSPTIG00000018274	CMSS1	100	91.071	ENSANAG00000023565	CMSS1	100	91.071	Aotus_nancymaae
ENSPTIG00000018274	CMSS1	100	50.515	ENSACLG00000027294	cmss1	100	51.203	Astatotilapia_calliptera
ENSPTIG00000018274	CMSS1	100	46.154	ENSAMXG00000002046	cmss1	100	47.333	Astyanax_mexicanus
ENSPTIG00000018274	CMSS1	100	90.681	ENSBTAG00000013663	CMSS1	100	90.681	Bos_taurus
ENSPTIG00000018274	CMSS1	100	90.714	ENSCJAG00000000610	CMSS1	100	90.714	Callithrix_jacchus
ENSPTIG00000018274	CMSS1	92	94.961	ENSCAFG00000009230	CMSS1	93	94.961	Canis_familiaris
ENSPTIG00000018274	CMSS1	87	82.857	ENSCAFG00020024156	-	68	90.323	Canis_lupus_dingo
ENSPTIG00000018274	CMSS1	93	94.208	ENSCAFG00020009464	-	95	94.208	Canis_lupus_dingo
ENSPTIG00000018274	CMSS1	92	89.883	ENSCHIG00000013003	CMSS1	93	89.883	Capra_hircus
ENSPTIG00000018274	CMSS1	96	88.192	ENSTSYG00000009266	CMSS1	99	91.085	Carlito_syrichta
ENSPTIG00000018274	CMSS1	80	72.926	ENSCAPG00000013584	CMSS1	100	73.362	Cavia_aperea
ENSPTIG00000018274	CMSS1	100	88.530	ENSCPOG00000014680	CMSS1	100	88.530	Cavia_porcellus
ENSPTIG00000018274	CMSS1	100	92.500	ENSCCAG00000034685	CMSS1	100	92.500	Cebus_capucinus
ENSPTIG00000018274	CMSS1	100	91.756	ENSCATG00000031980	CMSS1	100	91.756	Cercocebus_atys
ENSPTIG00000018274	CMSS1	82	94.760	ENSCLAG00000011241	CMSS1	98	94.760	Chinchilla_lanigera
ENSPTIG00000018274	CMSS1	88	92.653	ENSCSAG00000006024	CMSS1	100	92.653	Chlorocebus_sabaeus
ENSPTIG00000018274	CMSS1	100	70.968	ENSCHOG00000012098	CMSS1	100	70.968	Choloepus_hoffmanni
ENSPTIG00000018274	CMSS1	80	39.565	ENSCING00000014848	-	100	41.711	Ciona_intestinalis
ENSPTIG00000018274	CMSS1	100	91.756	ENSCANG00000031337	CMSS1	100	91.756	Colobus_angolensis_palliatus
ENSPTIG00000018274	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSPTIG00000018274	CMSS1	92	83.268	ENSCGRG00000006722	Cmss1	99	83.268	Cricetulus_griseus_crigri
ENSPTIG00000018274	CMSS1	100	51.515	ENSCSEG00000004958	cmss1	100	52.721	Cynoglossus_semilaevis
ENSPTIG00000018274	CMSS1	100	52.759	ENSCVAG00000005039	cmss1	100	53.287	Cyprinodon_variegatus
ENSPTIG00000018274	CMSS1	100	46.333	ENSDARG00000112579	cmss1	100	47.138	Danio_rerio
ENSPTIG00000018274	CMSS1	94	87.786	ENSDNOG00000040418	CMSS1	92	88.417	Dasypus_novemcinctus
ENSPTIG00000018274	CMSS1	100	91.039	ENSDORG00000010461	Cmss1	100	91.039	Dipodomys_ordii
ENSPTIG00000018274	CMSS1	82	93.860	ENSEASG00005010966	CMSS1	99	94.064	Equus_asinus_asinus
ENSPTIG00000018274	CMSS1	95	89.474	ENSECAG00000015662	CMSS1	99	92.478	Equus_caballus
ENSPTIG00000018274	CMSS1	100	56.989	ENSEEUG00000007624	-	100	56.989	Erinaceus_europaeus
ENSPTIG00000018274	CMSS1	100	47.573	ENSELUG00000019459	cmss1	100	51.667	Esox_lucius
ENSPTIG00000018274	CMSS1	100	98.566	ENSFCAG00000044577	CMSS1	100	98.566	Felis_catus
ENSPTIG00000018274	CMSS1	82	66.376	ENSFALG00000005816	CMSS1	97	66.376	Ficedula_albicollis
ENSPTIG00000018274	CMSS1	82	91.667	ENSFDAG00000012577	CMSS1	100	91.667	Fukomys_damarensis
ENSPTIG00000018274	CMSS1	81	61.905	ENSFHEG00000012008	cmss1	95	61.905	Fundulus_heteroclitus
ENSPTIG00000018274	CMSS1	99	51.546	ENSGMOG00000016729	cmss1	100	53.846	Gadus_morhua
ENSPTIG00000018274	CMSS1	96	63.806	ENSGALG00000015267	CMSS1	100	64.751	Gallus_gallus
ENSPTIG00000018274	CMSS1	74	63.768	ENSGAFG00000021217	cmss1	76	63.500	Gambusia_affinis
ENSPTIG00000018274	CMSS1	99	48.227	ENSGACG00000002798	cmss1	100	48.387	Gasterosteus_aculeatus
ENSPTIG00000018274	CMSS1	85	71.186	ENSGAGG00000019861	CMSS1	92	71.186	Gopherus_agassizii
ENSPTIG00000018274	CMSS1	92	92.248	ENSGGOG00000014125	CMSS1	99	92.248	Gorilla_gorilla
ENSPTIG00000018274	CMSS1	100	49.169	ENSHBUG00000008431	cmss1	100	50.000	Haplochromis_burtoni
ENSPTIG00000018274	CMSS1	91	87.747	ENSHGLG00000019481	CMSS1	100	87.747	Heterocephalus_glaber_female
ENSPTIG00000018274	CMSS1	92	87.549	ENSHGLG00100010314	CMSS1	100	87.549	Heterocephalus_glaber_male
ENSPTIG00000018274	CMSS1	100	52.542	ENSHCOG00000003222	cmss1	100	54.237	Hippocampus_comes
ENSPTIG00000018274	CMSS1	100	48.621	ENSIPUG00000011591	cmss1	100	48.973	Ictalurus_punctatus
ENSPTIG00000018274	CMSS1	100	92.115	ENSSTOG00000019366	CMSS1	100	92.115	Ictidomys_tridecemlineatus
ENSPTIG00000018274	CMSS1	100	86.738	ENSJJAG00000014894	Cmss1	100	86.738	Jaculus_jaculus
ENSPTIG00000018274	CMSS1	72	54.950	ENSKMAG00000002390	cmss1	80	54.500	Kryptolebias_marmoratus
ENSPTIG00000018274	CMSS1	79	52.917	ENSLBEG00000006298	cmss1	82	58.209	Labrus_bergylta
ENSPTIG00000018274	CMSS1	82	65.217	ENSLACG00000009293	CMSS1	100	65.217	Latimeria_chalumnae
ENSPTIG00000018274	CMSS1	100	51.590	ENSLOCG00000009391	cmss1	100	52.297	Lepisosteus_oculatus
ENSPTIG00000018274	CMSS1	82	92.105	ENSLAFG00000017509	CMSS1	100	92.105	Loxodonta_africana
ENSPTIG00000018274	CMSS1	100	92.473	ENSMFAG00000045006	CMSS1	100	92.473	Macaca_fascicularis
ENSPTIG00000018274	CMSS1	100	92.115	ENSMMUG00000002939	CMSS1	100	92.115	Macaca_mulatta
ENSPTIG00000018274	CMSS1	100	92.115	ENSMNEG00000031315	CMSS1	100	92.115	Macaca_nemestrina
ENSPTIG00000018274	CMSS1	100	91.756	ENSMLEG00000033660	CMSS1	100	91.756	Mandrillus_leucophaeus
ENSPTIG00000018274	CMSS1	100	53.793	ENSMAMG00000017176	cmss1	100	54.138	Mastacembelus_armatus
ENSPTIG00000018274	CMSS1	100	50.515	ENSMZEG00005021886	cmss1	100	51.203	Maylandia_zebra
ENSPTIG00000018274	CMSS1	82	68.421	ENSMGAG00000014360	CMSS1	100	68.421	Meleagris_gallopavo
ENSPTIG00000018274	CMSS1	100	62.143	ENSMAUG00000020609	Cmss1	100	60.777	Mesocricetus_auratus
ENSPTIG00000018274	CMSS1	100	92.115	ENSMICG00000048977	CMSS1	100	92.115	Microcebus_murinus
ENSPTIG00000018274	CMSS1	100	83.513	ENSMOCG00000021937	Cmss1	100	83.513	Microtus_ochrogaster
ENSPTIG00000018274	CMSS1	72	62.376	ENSMMOG00000019794	cmss1	83	62.000	Mola_mola
ENSPTIG00000018274	CMSS1	94	75.573	ENSMODG00000002275	CMSS1	98	75.573	Monodelphis_domestica
ENSPTIG00000018274	CMSS1	100	52.508	ENSMALG00000004250	cmss1	100	52.577	Monopterus_albus
ENSPTIG00000018274	CMSS1	100	83.214	MGP_CAROLIEiJ_G0020824	Cmss1	100	83.214	Mus_caroli
ENSPTIG00000018274	CMSS1	100	84.286	ENSMUSG00000022748	Cmss1	100	84.286	Mus_musculus
ENSPTIG00000018274	CMSS1	100	82.143	MGP_PahariEiJ_G0016524	Cmss1	100	82.143	Mus_pahari
ENSPTIG00000018274	CMSS1	100	83.571	MGP_SPRETEiJ_G0021724	Cmss1	100	83.571	Mus_spretus
ENSPTIG00000018274	CMSS1	92	96.109	ENSMPUG00000011324	CMSS1	99	96.109	Mustela_putorius_furo
ENSPTIG00000018274	CMSS1	92	93.077	ENSMLUG00000001131	CMSS1	99	93.077	Myotis_lucifugus
ENSPTIG00000018274	CMSS1	100	86.022	ENSNGAG00000020316	Cmss1	100	86.022	Nannospalax_galili
ENSPTIG00000018274	CMSS1	100	51.027	ENSNBRG00000003095	cmss1	100	51.203	Neolamprologus_brichardi
ENSPTIG00000018274	CMSS1	100	93.548	ENSNLEG00000034172	CMSS1	100	93.548	Nomascus_leucogenys
ENSPTIG00000018274	CMSS1	82	68.421	ENSMEUG00000014505	CMSS1	100	68.421	Notamacropus_eugenii
ENSPTIG00000018274	CMSS1	100	92.115	ENSOPRG00000002986	CMSS1	100	92.115	Ochotona_princeps
ENSPTIG00000018274	CMSS1	100	83.986	ENSODEG00000003558	-	100	83.986	Octodon_degus
ENSPTIG00000018274	CMSS1	100	77.778	ENSODEG00000001853	-	100	77.778	Octodon_degus
ENSPTIG00000018274	CMSS1	100	73.477	ENSODEG00000009446	-	100	73.477	Octodon_degus
ENSPTIG00000018274	CMSS1	100	88.889	ENSODEG00000005226	-	100	88.889	Octodon_degus
ENSPTIG00000018274	CMSS1	72	61.881	ENSONIG00000006678	cmss1	77	61.500	Oreochromis_niloticus
ENSPTIG00000018274	CMSS1	92	72.137	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSPTIG00000018274	CMSS1	92	93.411	ENSOCUG00000025366	CMSS1	93	93.411	Oryctolagus_cuniculus
ENSPTIG00000018274	CMSS1	100	55.088	ENSORLG00000020340	cmss1	100	56.098	Oryzias_latipes
ENSPTIG00000018274	CMSS1	82	53.712	ENSORLG00020012235	cmss1	85	57.000	Oryzias_latipes_hni
ENSPTIG00000018274	CMSS1	72	57.426	ENSORLG00015015551	cmss1	75	57.000	Oryzias_latipes_hsok
ENSPTIG00000018274	CMSS1	100	54.828	ENSOMEG00000012555	cmss1	100	55.670	Oryzias_melastigma
ENSPTIG00000018274	CMSS1	82	93.421	ENSOGAG00000002045	CMSS1	100	93.421	Otolemur_garnettii
ENSPTIG00000018274	CMSS1	92	89.922	ENSOARG00000017899	CMSS1	89	89.922	Ovis_aries
ENSPTIG00000018274	CMSS1	92	92.636	ENSPPAG00000038515	CMSS1	95	92.636	Pan_paniscus
ENSPTIG00000018274	CMSS1	100	98.925	ENSPPRG00000016767	CMSS1	100	98.925	Panthera_pardus
ENSPTIG00000018274	CMSS1	100	92.473	ENSPTRG00000015157	CMSS1	100	93.061	Pan_troglodytes
ENSPTIG00000018274	CMSS1	92	89.535	ENSPANG00000019980	CMSS1	99	89.535	Papio_anubis
ENSPTIG00000018274	CMSS1	95	56.159	ENSPKIG00000012609	cmss1	97	57.576	Paramormyrops_kingsleyae
ENSPTIG00000018274	CMSS1	82	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSPTIG00000018274	CMSS1	72	62.562	ENSPMGG00000010286	cmss1	86	62.189	Periophthalmus_magnuspinnatus
ENSPTIG00000018274	CMSS1	100	84.286	ENSPEMG00000016384	Cmss1	100	84.286	Peromyscus_maniculatus_bairdii
ENSPTIG00000018274	CMSS1	73	52.941	ENSPMAG00000001146	cmss1	98	53.000	Petromyzon_marinus
ENSPTIG00000018274	CMSS1	89	78.226	ENSPCIG00000015656	CMSS1	98	75.769	Phascolarctos_cinereus
ENSPTIG00000018274	CMSS1	100	52.797	ENSPFOG00000016849	cmss1	100	54.514	Poecilia_formosa
ENSPTIG00000018274	CMSS1	100	52.448	ENSPLAG00000008323	cmss1	100	54.167	Poecilia_latipinna
ENSPTIG00000018274	CMSS1	100	53.633	ENSPMEG00000021020	cmss1	100	53.633	Poecilia_mexicana
ENSPTIG00000018274	CMSS1	84	60.000	ENSPREG00000007618	cmss1	88	55.939	Poecilia_reticulata
ENSPTIG00000018274	CMSS1	100	91.398	ENSPPYG00000013606	CMSS1	100	91.398	Pongo_abelii
ENSPTIG00000018274	CMSS1	100	92.473	ENSPCOG00000020035	CMSS1	100	92.473	Propithecus_coquereli
ENSPTIG00000018274	CMSS1	100	81.720	ENSPVAG00000017031	CMSS1	100	81.720	Pteropus_vampyrus
ENSPTIG00000018274	CMSS1	91	50.566	ENSPNYG00000013428	cmss1	97	51.321	Pundamilia_nyererei
ENSPTIG00000018274	CMSS1	100	48.845	ENSPNAG00000007912	cmss1	100	48.845	Pygocentrus_nattereri
ENSPTIG00000018274	CMSS1	92	82.239	ENSRNOG00000027888	Cmss1	99	82.239	Rattus_norvegicus
ENSPTIG00000018274	CMSS1	100	91.039	ENSRBIG00000037931	CMSS1	100	91.039	Rhinopithecus_bieti
ENSPTIG00000018274	CMSS1	100	91.039	ENSRROG00000042910	CMSS1	100	91.039	Rhinopithecus_roxellana
ENSPTIG00000018274	CMSS1	100	86.071	ENSSBOG00000030980	CMSS1	99	91.892	Saimiri_boliviensis_boliviensis
ENSPTIG00000018274	CMSS1	89	76.190	ENSSHAG00000009321	CMSS1	99	76.190	Sarcophilus_harrisii
ENSPTIG00000018274	CMSS1	100	53.716	ENSSFOG00015001509	cmss1	100	55.172	Scleropages_formosus
ENSPTIG00000018274	CMSS1	100	53.767	ENSSMAG00000001653	cmss1	100	53.608	Scophthalmus_maximus
ENSPTIG00000018274	CMSS1	100	53.608	ENSSDUG00000007719	cmss1	100	55.822	Seriola_dumerili
ENSPTIG00000018274	CMSS1	74	64.251	ENSSLDG00000012300	cmss1	98	52.083	Seriola_lalandi_dorsalis
ENSPTIG00000018274	CMSS1	100	76.071	ENSSARG00000003584	CMSS1	100	76.071	Sorex_araneus
ENSPTIG00000018274	CMSS1	81	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSPTIG00000018274	CMSS1	74	64.563	ENSSPAG00000019182	cmss1	82	55.431	Stegastes_partitus
ENSPTIG00000018274	CMSS1	100	94.624	ENSSSCG00000011970	CMSS1	100	94.624	Sus_scrofa
ENSPTIG00000018274	CMSS1	82	65.939	ENSTGUG00000013635	CMSS1	100	65.939	Taeniopygia_guttata
ENSPTIG00000018274	CMSS1	100	51.761	ENSTRUG00000015265	cmss1	100	52.465	Takifugu_rubripes
ENSPTIG00000018274	CMSS1	72	56.436	ENSTNIG00000002880	cmss1	86	51.899	Tetraodon_nigroviridis
ENSPTIG00000018274	CMSS1	100	62.857	ENSTBEG00000016722	CMSS1	100	62.857	Tupaia_belangeri
ENSPTIG00000018274	CMSS1	100	90.323	ENSTTRG00000001562	CMSS1	100	90.323	Tursiops_truncatus
ENSPTIG00000018274	CMSS1	97	91.971	ENSUAMG00000024209	CMSS1	100	97.309	Ursus_americanus
ENSPTIG00000018274	CMSS1	93	94.595	ENSUMAG00000001983	CMSS1	99	94.186	Ursus_maritimus
ENSPTIG00000018274	CMSS1	100	69.534	ENSVPAG00000000263	CMSS1	100	69.534	Vicugna_pacos
ENSPTIG00000018274	CMSS1	88	94.309	ENSVVUG00000021647	-	100	94.309	Vulpes_vulpes
ENSPTIG00000018274	CMSS1	78	95.392	ENSVVUG00000007776	-	85	95.392	Vulpes_vulpes
ENSPTIG00000018274	CMSS1	100	56.940	ENSXETG00000011858	cmss1	100	56.940	Xenopus_tropicalis
ENSPTIG00000018274	CMSS1	75	62.981	ENSXCOG00000018724	cmss1	68	63.000	Xiphophorus_couchianus
ENSPTIG00000018274	CMSS1	75	62.981	ENSXMAG00000011243	cmss1	75	63.000	Xiphophorus_maculatus