EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSPTIG00000018507 (Gene tree)
Gene ID: 102953811
Gene Symbol: NCBP1
Alias: -
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Panthera_tigris_altaica
Status: putative
Strand: Minus strand
Length: 37567 bases
Position: chrKE721896.1:5608152-5645718
Accession: 102953811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPTIP00000021312	MIF4G_like	PF09088.11	1.4e-36	1	1
ENSPTIP00000021312	MIF4G_like_2	PF09090.11	1e-85	1	1
ENSPTIP00000021312	MIF4G	PF02854.19	8.1e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPTIT00000025689	NCBP1-201	2792	XM_007089293	ENSPTIP00000021312	790 (aa)	XP_007089355	UPI00004BB9BC
ENSPTIT00000025707	NCBP1-202	249	-	ENSPTIP00000021330	82 (aa)	-	UPI000046FE57

Gene Model

Click here to download ENSPTIG00000018507's gene model file

Pathways

Pathway ID	Pathway Name	Source
ptg03013	RNA transport	KEGG
ptg03015	mRNA surveillance pathway	KEGG
ptg03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSPTIG00000018507's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPTIG00000018507	NCBP1	100	99.620	ENSG00000136937	NCBP1	100	99.620	Homo_sapiens
ENSPTIG00000018507	NCBP1	99	83.879	ENSAPOG00000008002	NCBP1	99	83.249	Acanthochromis_polyacanthus
ENSPTIG00000018507	NCBP1	100	99.621	ENSAMEG00000004763	NCBP1	100	99.621	Ailuropoda_melanoleuca
ENSPTIG00000018507	NCBP1	99	84.237	ENSACIG00000000274	NCBP1	99	83.607	Amphilophus_citrinellus
ENSPTIG00000018507	NCBP1	99	84.005	ENSAOCG00000021148	NCBP1	99	83.375	Amphiprion_ocellaris
ENSPTIG00000018507	NCBP1	99	84.005	ENSAPEG00000001701	NCBP1	99	83.375	Amphiprion_percula
ENSPTIG00000018507	NCBP1	99	83.375	ENSATEG00000006929	NCBP1	99	82.997	Anabas_testudineus
ENSPTIG00000018507	NCBP1	95	90.621	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSPTIG00000018507	NCBP1	100	87.266	ENSACAG00000004409	NCBP1	87	87.141	Anolis_carolinensis
ENSPTIG00000018507	NCBP1	100	96.709	ENSANAG00000025744	NCBP1	99	99.720	Aotus_nancymaae
ENSPTIG00000018507	NCBP1	99	83.123	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
ENSPTIG00000018507	NCBP1	99	82.035	ENSAMXG00000016364	NCBP1	99	81.533	Astyanax_mexicanus
ENSPTIG00000018507	NCBP1	100	99.494	ENSBTAG00000009732	NCBP1	100	99.494	Bos_taurus
ENSPTIG00000018507	NCBP1	99	34.772	WBGene00018156	ncbp-1	99	34.279	Caenorhabditis_elegans
ENSPTIG00000018507	NCBP1	100	99.620	ENSCJAG00000010840	NCBP1	100	99.620	Callithrix_jacchus
ENSPTIG00000018507	NCBP1	100	100.000	ENSCAFG00000002445	NCBP1	100	100.000	Canis_familiaris
ENSPTIG00000018507	NCBP1	99	99.113	ENSCAFG00020017997	NCBP1	100	100.000	Canis_lupus_dingo
ENSPTIG00000018507	NCBP1	100	99.241	ENSCHIG00000020139	NCBP1	100	99.241	Capra_hircus
ENSPTIG00000018507	NCBP1	52	97.330	ENSTSYG00000011914	NCBP1	98	99.687	Carlito_syrichta
ENSPTIG00000018507	NCBP1	81	89.375	ENSCAPG00000014252	NCBP1	90	89.219	Cavia_aperea
ENSPTIG00000018507	NCBP1	97	97.653	ENSCPOG00000012573	NCBP1	99	97.653	Cavia_porcellus
ENSPTIG00000018507	NCBP1	100	99.747	ENSCCAG00000032297	NCBP1	100	99.747	Cebus_capucinus
ENSPTIG00000018507	NCBP1	100	99.620	ENSCATG00000010052	NCBP1	100	99.620	Cercocebus_atys
ENSPTIG00000018507	NCBP1	100	99.620	ENSCLAG00000014339	NCBP1	100	99.620	Chinchilla_lanigera
ENSPTIG00000018507	NCBP1	100	99.620	ENSCSAG00000010929	NCBP1	100	99.620	Chlorocebus_sabaeus
ENSPTIG00000018507	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	91	97.458	Choloepus_hoffmanni
ENSPTIG00000018507	NCBP1	100	86.164	ENSCPBG00000024344	NCBP1	99	90.694	Chrysemys_picta_bellii
ENSPTIG00000018507	NCBP1	99	54.235	ENSCING00000008990	-	99	54.109	Ciona_intestinalis
ENSPTIG00000018507	NCBP1	99	53.199	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSPTIG00000018507	NCBP1	100	99.620	ENSCANG00000036913	NCBP1	100	99.620	Colobus_angolensis_palliatus
ENSPTIG00000018507	NCBP1	100	98.481	ENSCGRG00001015771	Ncbp1	100	98.481	Cricetulus_griseus_chok1gshd
ENSPTIG00000018507	NCBP1	99	98.590	ENSCGRG00000010311	Ncbp1	100	98.590	Cricetulus_griseus_crigri
ENSPTIG00000018507	NCBP1	99	82.997	ENSCSEG00000012377	NCBP1	99	83.357	Cynoglossus_semilaevis
ENSPTIG00000018507	NCBP1	99	81.132	ENSCVAG00000008795	NCBP1	99	81.761	Cyprinodon_variegatus
ENSPTIG00000018507	NCBP1	100	98.481	ENSDNOG00000006885	NCBP1	100	98.481	Dasypus_novemcinctus
ENSPTIG00000018507	NCBP1	100	94.207	ENSDORG00000013652	Ncbp1	100	94.207	Dipodomys_ordii
ENSPTIG00000018507	NCBP1	100	57.267	FBgn0022942	Cbp80	100	57.750	Drosophila_melanogaster
ENSPTIG00000018507	NCBP1	84	33.871	FBgn0038887	CG7907	87	33.871	Drosophila_melanogaster
ENSPTIG00000018507	NCBP1	89	94.105	ENSETEG00000009705	NCBP1	89	94.105	Echinops_telfairi
ENSPTIG00000018507	NCBP1	100	73.711	ENSEBUG00000008386	NCBP1	100	73.459	Eptatretus_burgeri
ENSPTIG00000018507	NCBP1	100	99.494	ENSEASG00005022795	NCBP1	100	99.494	Equus_asinus_asinus
ENSPTIG00000018507	NCBP1	100	99.620	ENSECAG00000013847	NCBP1	100	99.620	Equus_caballus
ENSPTIG00000018507	NCBP1	95	94.157	ENSEEUG00000015973	NCBP1	99	93.758	Erinaceus_europaeus
ENSPTIG00000018507	NCBP1	99	81.006	ENSELUG00000022519	NCBP1	99	81.761	Esox_lucius
ENSPTIG00000018507	NCBP1	100	99.873	ENSFCAG00000001206	NCBP1	100	99.873	Felis_catus
ENSPTIG00000018507	NCBP1	98	89.440	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSPTIG00000018507	NCBP1	100	99.367	ENSFDAG00000010864	NCBP1	100	99.367	Fukomys_damarensis
ENSPTIG00000018507	NCBP1	99	82.642	ENSFHEG00000000655	NCBP1	99	82.138	Fundulus_heteroclitus
ENSPTIG00000018507	NCBP1	99	79.874	ENSGMOG00000008653	NCBP1	99	79.874	Gadus_morhua
ENSPTIG00000018507	NCBP1	98	90.629	ENSGALG00000002087	NCBP1	100	90.290	Gallus_gallus
ENSPTIG00000018507	NCBP1	99	83.143	ENSGAFG00000017787	NCBP1	99	83.016	Gambusia_affinis
ENSPTIG00000018507	NCBP1	99	82.434	ENSGACG00000016772	NCBP1	98	82.058	Gasterosteus_aculeatus
ENSPTIG00000018507	NCBP1	100	88.805	ENSGAGG00000019483	NCBP1	99	90.417	Gopherus_agassizii
ENSPTIG00000018507	NCBP1	100	99.620	ENSGGOG00000001376	NCBP1	100	99.620	Gorilla_gorilla
ENSPTIG00000018507	NCBP1	99	83.123	ENSHBUG00000020843	NCBP1	99	82.746	Haplochromis_burtoni
ENSPTIG00000018507	NCBP1	100	86.616	ENSHGLG00000018112	-	100	86.616	Heterocephalus_glaber_female
ENSPTIG00000018507	NCBP1	100	99.494	ENSHGLG00000001882	NCBP1	100	99.494	Heterocephalus_glaber_female
ENSPTIG00000018507	NCBP1	100	99.494	ENSHGLG00100013014	NCBP1	100	99.494	Heterocephalus_glaber_male
ENSPTIG00000018507	NCBP1	100	86.364	ENSHGLG00100017373	-	100	86.364	Heterocephalus_glaber_male
ENSPTIG00000018507	NCBP1	79	72.540	ENSHCOG00000000204	NCBP1	92	72.540	Hippocampus_comes
ENSPTIG00000018507	NCBP1	99	82.516	ENSIPUG00000007275	ncbp1	99	82.138	Ictalurus_punctatus
ENSPTIG00000018507	NCBP1	100	99.494	ENSSTOG00000002695	NCBP1	100	99.494	Ictidomys_tridecemlineatus
ENSPTIG00000018507	NCBP1	99	82.494	ENSKMAG00000003594	NCBP1	99	86.585	Kryptolebias_marmoratus
ENSPTIG00000018507	NCBP1	99	81.366	ENSLBEG00000011661	NCBP1	99	80.870	Labrus_bergylta
ENSPTIG00000018507	NCBP1	100	80.473	ENSLACG00000013955	NCBP1	100	79.975	Latimeria_chalumnae
ENSPTIG00000018507	NCBP1	99	72.569	ENSLOCG00000009579	NCBP1	99	72.569	Lepisosteus_oculatus
ENSPTIG00000018507	NCBP1	100	98.987	ENSLAFG00000005999	NCBP1	100	98.987	Loxodonta_africana
ENSPTIG00000018507	NCBP1	100	99.620	ENSMFAG00000030994	NCBP1	100	99.620	Macaca_fascicularis
ENSPTIG00000018507	NCBP1	99	99.615	ENSMMUG00000012281	NCBP1	99	99.615	Macaca_mulatta
ENSPTIG00000018507	NCBP1	100	99.620	ENSMNEG00000042790	NCBP1	100	99.620	Macaca_nemestrina
ENSPTIG00000018507	NCBP1	100	99.620	ENSMLEG00000030374	NCBP1	100	99.620	Mandrillus_leucophaeus
ENSPTIG00000018507	NCBP1	99	83.627	ENSMAMG00000014806	NCBP1	99	83.123	Mastacembelus_armatus
ENSPTIG00000018507	NCBP1	99	83.123	ENSMZEG00005003469	NCBP1	99	82.746	Maylandia_zebra
ENSPTIG00000018507	NCBP1	97	82.812	ENSMZEG00005009290	-	99	82.682	Maylandia_zebra
ENSPTIG00000018507	NCBP1	99	97.837	ENSMAUG00000020583	Ncbp1	99	97.837	Mesocricetus_auratus
ENSPTIG00000018507	NCBP1	100	99.241	ENSMICG00000012682	NCBP1	100	99.241	Microcebus_murinus
ENSPTIG00000018507	NCBP1	100	98.101	ENSMOCG00000015818	Ncbp1	100	98.101	Microtus_ochrogaster
ENSPTIG00000018507	NCBP1	91	82.517	ENSMMOG00000002610	NCBP1	99	82.378	Mola_mola
ENSPTIG00000018507	NCBP1	100	93.924	ENSMODG00000003202	NCBP1	99	93.671	Monodelphis_domestica
ENSPTIG00000018507	NCBP1	99	82.746	ENSMALG00000003547	NCBP1	99	82.242	Monopterus_albus
ENSPTIG00000018507	NCBP1	100	98.101	MGP_CAROLIEiJ_G0025982	Ncbp1	100	98.101	Mus_caroli
ENSPTIG00000018507	NCBP1	100	98.101	ENSMUSG00000028330	Ncbp1	100	98.101	Mus_musculus
ENSPTIG00000018507	NCBP1	100	98.354	MGP_PahariEiJ_G0028318	Ncbp1	100	98.354	Mus_pahari
ENSPTIG00000018507	NCBP1	100	98.101	MGP_SPRETEiJ_G0026945	Ncbp1	100	98.101	Mus_spretus
ENSPTIG00000018507	NCBP1	100	99.873	ENSMPUG00000006399	NCBP1	100	99.873	Mustela_putorius_furo
ENSPTIG00000018507	NCBP1	99	98.203	ENSMLUG00000015201	NCBP1	100	98.203	Myotis_lucifugus
ENSPTIG00000018507	NCBP1	100	98.354	ENSNGAG00000014101	Ncbp1	100	98.354	Nannospalax_galili
ENSPTIG00000018507	NCBP1	76	86.344	ENSNBRG00000014674	NCBP1	97	86.344	Neolamprologus_brichardi
ENSPTIG00000018507	NCBP1	100	99.620	ENSNLEG00000016909	NCBP1	100	99.620	Nomascus_leucogenys
ENSPTIG00000018507	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	90	92.793	Notamacropus_eugenii
ENSPTIG00000018507	NCBP1	84	92.712	ENSOPRG00000002144	-	88	92.712	Ochotona_princeps
ENSPTIG00000018507	NCBP1	100	99.367	ENSODEG00000003232	NCBP1	100	99.367	Octodon_degus
ENSPTIG00000018507	NCBP1	99	83.123	ENSONIG00000001502	NCBP1	99	82.746	Oreochromis_niloticus
ENSPTIG00000018507	NCBP1	79	95.506	ENSOANG00000001918	NCBP1	100	95.506	Ornithorhynchus_anatinus
ENSPTIG00000018507	NCBP1	98	98.715	ENSOCUG00000013853	NCBP1	97	98.715	Oryctolagus_cuniculus
ENSPTIG00000018507	NCBP1	99	81.454	ENSORLG00000011008	NCBP1	99	81.078	Oryzias_latipes
ENSPTIG00000018507	NCBP1	99	81.454	ENSORLG00020017455	NCBP1	99	81.078	Oryzias_latipes_hni
ENSPTIG00000018507	NCBP1	99	81.579	ENSORLG00015012127	NCBP1	99	81.203	Oryzias_latipes_hsok
ENSPTIG00000018507	NCBP1	99	82.080	ENSOMEG00000020698	NCBP1	99	81.955	Oryzias_melastigma
ENSPTIG00000018507	NCBP1	100	99.621	ENSOGAG00000013888	NCBP1	100	99.621	Otolemur_garnettii
ENSPTIG00000018507	NCBP1	100	99.241	ENSOARG00000011233	NCBP1	100	99.241	Ovis_aries
ENSPTIG00000018507	NCBP1	100	99.620	ENSPPAG00000026462	NCBP1	100	99.620	Pan_paniscus
ENSPTIG00000018507	NCBP1	100	100.000	ENSPPRG00000022574	NCBP1	100	100.000	Panthera_pardus
ENSPTIG00000018507	NCBP1	100	99.620	ENSPTRG00000021167	NCBP1	100	99.620	Pan_troglodytes
ENSPTIG00000018507	NCBP1	100	99.620	ENSPANG00000025591	NCBP1	100	99.620	Papio_anubis
ENSPTIG00000018507	NCBP1	100	81.258	ENSPKIG00000015861	NCBP1	100	81.132	Paramormyrops_kingsleyae
ENSPTIG00000018507	NCBP1	64	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSPTIG00000018507	NCBP1	99	79.975	ENSPMGG00000020476	NCBP1	99	79.471	Periophthalmus_magnuspinnatus
ENSPTIG00000018507	NCBP1	100	97.975	ENSPEMG00000020105	Ncbp1	100	97.975	Peromyscus_maniculatus_bairdii
ENSPTIG00000018507	NCBP1	100	67.746	ENSPMAG00000005533	NCBP1	100	67.746	Petromyzon_marinus
ENSPTIG00000018507	NCBP1	100	93.671	ENSPCIG00000015800	NCBP1	99	94.919	Phascolarctos_cinereus
ENSPTIG00000018507	NCBP1	99	82.331	ENSPFOG00000004158	NCBP1	99	81.955	Poecilia_formosa
ENSPTIG00000018507	NCBP1	99	82.767	ENSPLAG00000020002	NCBP1	99	82.390	Poecilia_latipinna
ENSPTIG00000018507	NCBP1	99	82.767	ENSPMEG00000019821	NCBP1	99	82.390	Poecilia_mexicana
ENSPTIG00000018507	NCBP1	99	82.663	ENSPREG00000006035	NCBP1	99	82.286	Poecilia_reticulata
ENSPTIG00000018507	NCBP1	100	99.620	ENSPPYG00000019426	NCBP1	100	99.620	Pongo_abelii
ENSPTIG00000018507	NCBP1	90	90.030	ENSPCAG00000009943	NCBP1	90	90.030	Procavia_capensis
ENSPTIG00000018507	NCBP1	82	99.593	ENSPCOG00000020024	NCBP1	98	99.593	Propithecus_coquereli
ENSPTIG00000018507	NCBP1	100	99.367	ENSPVAG00000005924	NCBP1	100	99.367	Pteropus_vampyrus
ENSPTIG00000018507	NCBP1	91	83.101	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
ENSPTIG00000018507	NCBP1	99	82.663	ENSPNAG00000027753	NCBP1	99	82.286	Pygocentrus_nattereri
ENSPTIG00000018507	NCBP1	100	98.228	ENSRNOG00000023605	Ncbp1	100	98.228	Rattus_norvegicus
ENSPTIG00000018507	NCBP1	100	99.620	ENSRBIG00000043175	NCBP1	100	99.620	Rhinopithecus_bieti
ENSPTIG00000018507	NCBP1	100	99.620	ENSRROG00000029767	NCBP1	100	99.620	Rhinopithecus_roxellana
ENSPTIG00000018507	NCBP1	100	99.747	ENSSBOG00000019378	NCBP1	100	99.747	Saimiri_boliviensis_boliviensis
ENSPTIG00000018507	NCBP1	69	95.720	ENSSHAG00000015882	NCBP1	73	95.720	Sarcophilus_harrisii
ENSPTIG00000018507	NCBP1	99	81.643	ENSSFOG00015001872	NCBP1	100	80.886	Scleropages_formosus
ENSPTIG00000018507	NCBP1	99	81.990	ENSSMAG00000007463	NCBP1	99	81.738	Scophthalmus_maximus
ENSPTIG00000018507	NCBP1	99	83.523	ENSSDUG00000007019	NCBP1	100	83.128	Seriola_dumerili
ENSPTIG00000018507	NCBP1	99	83.249	ENSSLDG00000021924	NCBP1	99	82.872	Seriola_lalandi_dorsalis
ENSPTIG00000018507	NCBP1	85	90.830	ENSSARG00000007274	NCBP1	87	90.830	Sorex_araneus
ENSPTIG00000018507	NCBP1	100	82.152	ENSSPUG00000008609	NCBP1	100	82.152	Sphenodon_punctatus
ENSPTIG00000018507	NCBP1	99	83.753	ENSSPAG00000012550	NCBP1	99	83.375	Stegastes_partitus
ENSPTIG00000018507	NCBP1	100	99.747	ENSSSCG00000005366	NCBP1	100	99.747	Sus_scrofa
ENSPTIG00000018507	NCBP1	100	83.899	ENSTGUG00000001472	NCBP1	100	84.025	Taeniopygia_guttata
ENSPTIG00000018507	NCBP1	99	82.116	ENSTRUG00000005287	NCBP1	99	81.738	Takifugu_rubripes
ENSPTIG00000018507	NCBP1	100	95.949	ENSTBEG00000004035	NCBP1	100	95.949	Tupaia_belangeri
ENSPTIG00000018507	NCBP1	88	99.796	ENSTTRG00000000507	NCBP1	88	99.796	Tursiops_truncatus
ENSPTIG00000018507	NCBP1	100	99.873	ENSUAMG00000005471	NCBP1	100	99.873	Ursus_americanus
ENSPTIG00000018507	NCBP1	97	97.529	ENSUMAG00000011865	NCBP1	100	100.000	Ursus_maritimus
ENSPTIG00000018507	NCBP1	100	95.570	ENSVPAG00000010537	NCBP1	100	95.570	Vicugna_pacos
ENSPTIG00000018507	NCBP1	100	100.000	ENSVVUG00000019725	NCBP1	100	100.000	Vulpes_vulpes
ENSPTIG00000018507	NCBP1	100	81.416	ENSXETG00000010179	ncbp1	100	81.416	Xenopus_tropicalis
ENSPTIG00000018507	NCBP1	99	82.893	ENSXMAG00000018253	NCBP1	99	82.516	Xiphophorus_maculatus